| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623873
Identifier: 116623873
GI number: 116623873
Start: 6054058
End: 6055587
Strand: Direct
Name: 116623873
Synonym: Acid_4785
Alternate gene names: NA
Gene position: 6054058-6055587 (Clockwise)
Preceding gene: 116623870
Following gene: 116623875
Centisome position: 60.75
GC content: 59.8
Gene sequence:
>1530_bases ATGCGGGTGGTTCGGCTATACTCCGCAAGAGCCCACCCGTCCAAGGTGGAAGCGGTATCACACGCCCGGTTTGCGAAGGC GGATCAGCAGCCAAAAAGTTGTTCGTTAGAAAGCGAGAATATGCAGGAGGCACACGTGCATTATATTTATCGAACTTTCC AGAGGATCGCAGCAGTCGCCGTGATCGGTGCTGTGGTCATCACGGGAACTGCTCAGTTCGCCCAAGCGCAGGCTGCTCCC GAGAAGAAGGTTAAAGACCAGGGCGAATACGATATCTTTAACCAGACGATTAAGGATGCGAGCAACCCGGCGCAACAGAT CAAGGATCTGGACACCTGGACGCAGAAGTATCCGGATTCCGATTACAAGGACGATCGCCTGTACTACTACATCCAGGCGT ACAACGCGACCAACCAGCCGGCCAAAGTGCTCGAGATCGGCTCGCAACTGATGAGCCGCGATCTGAAACAGGTATTCAAA GACCCGAAAACCGGACCGCAGCAGATTTTGACCGTGCTTTACCTGATGTCCGTGAACACGCTGAAGCTGCCCAACGCGAC ACCGGACCAGCTGGCGACGGGCGAGAAGGCGGCGCGCGCGCTGCAGGATTTCGCGGGCGAGTATTTCACGGCCGCCAACA AGCCCCCAAGCTCAAGCGATGCGGACTGGGCCAAGACGAAGAACGATGTGCTGAGCCTGGCGAAGGCACTGCTGATGAAT GTGGCCCAGCGTCCGGGCGCGGAAGCGATGACCAAATATCGCGCCGATAAGAACGTGGACAATTGCAAAGCGGCGGAAGC GGCCTACCAGAAGGCGCAGCAGCAGTTCCCCGACGGCGCGGCGATCGCGTTCGGACTGGGCACCGCCCAAGTCTGCCTCT ATAAGGTGCAGCCCGACAAGATCAGCTCCGGCCTCTACGAAGTGGCGCGCGCGGTGGCGCTCGATCCGACCCTCGGCGGC ACCGCCGATCCCAAGGCCATCGAAAGCTACCTGACCAATACCTACACCCAGTATCACGGCGGCGACGATGCCGGCCTGAA GGAATTGAAGGAAACGGCCAAGGCCAATCCGATGCCGCCGGCCGGCTTCAAGATCAAGTCCGCGACCGAGATCGCGACCG AGAAGGAAGAAGAGTTCAAGAAGAGCAATCCGCAGCTCGCGCTCTGGATGGGCATCAAGAAGCAGCTCGCGGATACAGGC GGCGAGCAGTACTTTGAAGGCACGCTGAAGAACGCCGCGGTACCTAAGCTGAAGGGCACCGTGGTGGAAGGCAAGCCGTC GTGCAGGAGTAAGGAACTGCTGGTGGCCCTCTCCGACGCTACCCACGCGGAAGTCGCCCTCAAGCTGGATGCGGCGCTCA CGGGCAAGCCCGAGGCGGGTGTCGAGATCCAGTGGGAAGGCGTTCCCTCGGCGTTCACCAAGGATCCCTTCATGCTGACC ATGGACACGGAAAAGGCCAAGATCGAGAACCTCAAGGTCACTCCGTGCGCCGCGGCTCCCGCAAAGAAGGCCGCTCCGAG AAAGAAGTAA
Upstream 100 bases:
>100_bases TTGGTCACGTTTTGGTCATGTTTGTTGGGGCAATGATCTTCCTCTGCTATGATTTGGATCGGAACCGGGTGAACAAAATC GGAGTCCAAGATGTTGCGCC
Downstream 100 bases:
>100_bases GCGAAAGCGAAAATGGAAGACAAAAGGCCCGGGGGTGACCCCGGGCCTTTTTTGTATTTTGAATCGTCGTGTCGCGAAGG CCGCCTTACGTGCGGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MRVVRLYSARAHPSKVEAVSHARFAKADQQPKSCSLESENMQEAHVHYIYRTFQRIAAVAVIGAVVITGTAQFAQAQAAP EKKVKDQGEYDIFNQTIKDASNPAQQIKDLDTWTQKYPDSDYKDDRLYYYIQAYNATNQPAKVLEIGSQLMSRDLKQVFK DPKTGPQQILTVLYLMSVNTLKLPNATPDQLATGEKAARALQDFAGEYFTAANKPPSSSDADWAKTKNDVLSLAKALLMN VAQRPGAEAMTKYRADKNVDNCKAAEAAYQKAQQQFPDGAAIAFGLGTAQVCLYKVQPDKISSGLYEVARAVALDPTLGG TADPKAIESYLTNTYTQYHGGDDAGLKELKETAKANPMPPAGFKIKSATEIATEKEEEFKKSNPQLALWMGIKKQLADTG GEQYFEGTLKNAAVPKLKGTVVEGKPSCRSKELLVALSDATHAEVALKLDAALTGKPEAGVEIQWEGVPSAFTKDPFMLT MDTEKAKIENLKVTPCAAAPAKKAAPRKK
Sequences:
>Translated_509_residues MRVVRLYSARAHPSKVEAVSHARFAKADQQPKSCSLESENMQEAHVHYIYRTFQRIAAVAVIGAVVITGTAQFAQAQAAP EKKVKDQGEYDIFNQTIKDASNPAQQIKDLDTWTQKYPDSDYKDDRLYYYIQAYNATNQPAKVLEIGSQLMSRDLKQVFK DPKTGPQQILTVLYLMSVNTLKLPNATPDQLATGEKAARALQDFAGEYFTAANKPPSSSDADWAKTKNDVLSLAKALLMN VAQRPGAEAMTKYRADKNVDNCKAAEAAYQKAQQQFPDGAAIAFGLGTAQVCLYKVQPDKISSGLYEVARAVALDPTLGG TADPKAIESYLTNTYTQYHGGDDAGLKELKETAKANPMPPAGFKIKSATEIATEKEEEFKKSNPQLALWMGIKKQLADTG GEQYFEGTLKNAAVPKLKGTVVEGKPSCRSKELLVALSDATHAEVALKLDAALTGKPEAGVEIQWEGVPSAFTKDPFMLT MDTEKAKIENLKVTPCAAAPAKKAAPRKK >Mature_509_residues MRVVRLYSARAHPSKVEAVSHARFAKADQQPKSCSLESENMQEAHVHYIYRTFQRIAAVAVIGAVVITGTAQFAQAQAAP EKKVKDQGEYDIFNQTIKDASNPAQQIKDLDTWTQKYPDSDYKDDRLYYYIQAYNATNQPAKVLEIGSQLMSRDLKQVFK DPKTGPQQILTVLYLMSVNTLKLPNATPDQLATGEKAARALQDFAGEYFTAANKPPSSSDADWAKTKNDVLSLAKALLMN VAQRPGAEAMTKYRADKNVDNCKAAEAAYQKAQQQFPDGAAIAFGLGTAQVCLYKVQPDKISSGLYEVARAVALDPTLGG TADPKAIESYLTNTYTQYHGGDDAGLKELKETAKANPMPPAGFKIKSATEIATEKEEEFKKSNPQLALWMGIKKQLADTG GEQYFEGTLKNAAVPKLKGTVVEGKPSCRSKELLVALSDATHAEVALKLDAALTGKPEAGVEIQWEGVPSAFTKDPFMLT MDTEKAKIENLKVTPCAAAPAKKAAPRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55465; Mature: 55465
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVRLYSARAHPSKVEAVSHARFAKADQQPKSCSLESENMQEAHVHYIYRTFQRIAAVA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIGAVVITGTAQFAQAQAAPEKKVKDQGEYDIFNQTIKDASNPAQQIKDLDTWTQKYPDS HHHHHHHHCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC DYKDDRLYYYIQAYNATNQPAKVLEIGSQLMSRDLKQVFKDPKTGPQQILTVLYLMSVNT CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCE LKLPNATPDQLATGEKAARALQDFAGEYFTAANKPPSSSDADWAKTKNDVLSLAKALLMN EECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAQRPGAEAMTKYRADKNVDNCKAAEAAYQKAQQQFPDGAAIAFGLGTAQVCLYKVQPDK HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHH ISSGLYEVARAVALDPTLGGTADPKAIESYLTNTYTQYHGGDDAGLKELKETAKANPMPP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC AGFKIKSATEIATEKEEEFKKSNPQLALWMGIKKQLADTGGEQYFEGTLKNAAVPKLKGT CCEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE VVEGKPSCRSKELLVALSDATHAEVALKLDAALTGKPEAGVEIQWEGVPSAFTKDPFMLT EECCCCCCCCCEEEEEECCCCCCEEEEEECHHCCCCCCCCCEEEECCCCCCCCCCCEEEE MDTEKAKIENLKVTPCAAAPAKKAAPRKK ECCCHHHHCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRVVRLYSARAHPSKVEAVSHARFAKADQQPKSCSLESENMQEAHVHYIYRTFQRIAAVA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIGAVVITGTAQFAQAQAAPEKKVKDQGEYDIFNQTIKDASNPAQQIKDLDTWTQKYPDS HHHHHHHHCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC DYKDDRLYYYIQAYNATNQPAKVLEIGSQLMSRDLKQVFKDPKTGPQQILTVLYLMSVNT CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCE LKLPNATPDQLATGEKAARALQDFAGEYFTAANKPPSSSDADWAKTKNDVLSLAKALLMN EECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAQRPGAEAMTKYRADKNVDNCKAAEAAYQKAQQQFPDGAAIAFGLGTAQVCLYKVQPDK HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHH ISSGLYEVARAVALDPTLGGTADPKAIESYLTNTYTQYHGGDDAGLKELKETAKANPMPP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC AGFKIKSATEIATEKEEEFKKSNPQLALWMGIKKQLADTGGEQYFEGTLKNAAVPKLKGT CCEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE VVEGKPSCRSKELLVALSDATHAEVALKLDAALTGKPEAGVEIQWEGVPSAFTKDPFMLT EECCCCCCCCCEEEEEECCCCCCEEEEEECHHCCCCCCCCCEEEECCCCCCCCCCCEEEE MDTEKAKIENLKVTPCAAAPAKKAAPRKK ECCCHHHHCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA