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The map label for this gene is 116623875

Identifier: 116623875

GI number: 116623875

Start: 6056085

End: 6056429

Strand: Direct

Name: 116623875

Synonym: Acid_4787

Alternate gene names: NA

Gene position: 6056085-6056429 (Clockwise)

Preceding gene: 116623873

Following gene: 116623877

Centisome position: 60.77

GC content: 60.29

Gene sequence:

>345_bases
ATGCCACTTTATGATTATCGGTGTCACCGCTGCGGGGAAGTTTTCGAGGTCCGGCAGAAGTTCTCCGATCCGCTGCTGAC
CGAACACGAAGCCTGCGGAGGCGAGGTGGAGCGCCTGATCTCGGCTCCCGCACTCCAGTTCAAGGGAACCGGCTGGTACG
TCACGGATTACGCGAAGAACGGCAAATCGCCCTCCACCGGAACCAACGCGAAATCCGAGGGTAAGGCGGATTCCGGCGCA
GGCAAATCCGAGAGCGCAAGCGAGAGCAAGAGCGAGGCGAAATCGGAGTCCAAATCAGACTCCAAGCCCTCCCCTGCCCC
TGCGTCCACCAGCAGCGAGAAGTAA

Upstream 100 bases:

>100_bases
TTGCTGGAATATCCCCCATCACAGGCAGGCTGCAACGGGAGGCCATATTCGATCATCTGATACACTGAGAATAGATATCC
AGTAGAGAAATTCCGTAAAT

Downstream 100 bases:

>100_bases
GCACCCGCGCGACTATGCGCGGGCGCCGGCAGCCTTCAGCGATTCCTTGCGAATGCCATCGACCCAACGCTGCAGCATGG
CATCCGAACGTGGGGGCGAG

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: Regulatory Protein FmdB Family; Type I Antifreeze Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPLYDYRCHRCGEVFEVRQKFSDPLLTEHEACGGEVERLISAPALQFKGTGWYVTDYAKNGKSPSTGTNAKSEGKADSGA
GKSESASESKSEAKSESKSDSKPSPAPASTSSEK

Sequences:

>Translated_114_residues
MPLYDYRCHRCGEVFEVRQKFSDPLLTEHEACGGEVERLISAPALQFKGTGWYVTDYAKNGKSPSTGTNAKSEGKADSGA
GKSESASESKSEAKSESKSDSKPSPAPASTSSEK
>Mature_113_residues
PLYDYRCHRCGEVFEVRQKFSDPLLTEHEACGGEVERLISAPALQFKGTGWYVTDYAKNGKSPSTGTNAKSEGKADSGAG
KSESASESKSEAKSESKSDSKPSPAPASTSSEK

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12154; Mature: 12023

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYDYRCHRCGEVFEVRQKFSDPLLTEHEACGGEVERLISAPALQFKGTGWYVTDYAKN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCEECCCCEEEECCCCC
GKSPSTGTNAKSEGKADSGAGKSESASESKSEAKSESKSDSKPSPAPASTSSEK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLYDYRCHRCGEVFEVRQKFSDPLLTEHEACGGEVERLISAPALQFKGTGWYVTDYAKN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCEECCCCEEEECCCCC
GKSPSTGTNAKSEGKADSGAGKSESASESKSEAKSESKSDSKPSPAPASTSSEK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA