| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623838
Identifier: 116623838
GI number: 116623838
Start: 6009591
End: 6010016
Strand: Direct
Name: 116623838
Synonym: Acid_4750
Alternate gene names: NA
Gene position: 6009591-6010016 (Clockwise)
Preceding gene: 116623837
Following gene: 116623842
Centisome position: 60.3
GC content: 61.03
Gene sequence:
>426_bases ATGAAGCTTTCGCGAAGACAGATGGCGGGCCTGCTGCCCGCGCTGGCGGCAGCGCAGACTGCGGAGAAGAAGGCCAAGCC GGTGTTGACGTCCAAGACCTATCTATACGAAGACATGCCGGTGAAGCCGAACGGGACGAACGCGACGCGCGCGGTGTTCG ACGGGAAAAACCACTCGGGCTTCGGCGTGGAGCTGCACATTACCGAACTGGGTCCGGGGATGGCACCGCACGCTCCGCAC CATCACGTGAATGAAGAGGCGCTGATGCTGCGCTCGGGGCAGCTGGATGTGACGATTGAAGGCAAGACCATGCGGGTGAC GGCGGGCAGCGTGGTGTATGTGAATTCGAACGAGGAGCACGGCTGGAAAAATCCGGGGCCGGAGAAGGCGCAGTACTTTG TAATCGCGTTGGGGAAGGAAAGCTAA
Upstream 100 bases:
>100_bases CGGTGAGCGCTCCGCACCTGGCGAATGTGGCATTCCACGGTAACAAGCGCGCGTACCTGAGCGCGGACGGGACTAAGGTA AGTTAAACAGGGGGGACACG
Downstream 100 bases:
>100_bases AGACAAGGAGTACCGTGCCCTTAGAACCCGTAATCAGTTCCGTGGCACGGATGGGATTGGCGGCGAAGCCTGTACCATAG AGCGGACCTGGATCCGGGTT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKLSRRQMAGLLPALAAAQTAEKKAKPVLTSKTYLYEDMPVKPNGTNATRAVFDGKNHSGFGVELHITELGPGMAPHAPH HHVNEEALMLRSGQLDVTIEGKTMRVTAGSVVYVNSNEEHGWKNPGPEKAQYFVIALGKES
Sequences:
>Translated_141_residues MKLSRRQMAGLLPALAAAQTAEKKAKPVLTSKTYLYEDMPVKPNGTNATRAVFDGKNHSGFGVELHITELGPGMAPHAPH HHVNEEALMLRSGQLDVTIEGKTMRVTAGSVVYVNSNEEHGWKNPGPEKAQYFVIALGKES >Mature_141_residues MKLSRRQMAGLLPALAAAQTAEKKAKPVLTSKTYLYEDMPVKPNGTNATRAVFDGKNHSGFGVELHITELGPGMAPHAPH HHVNEEALMLRSGQLDVTIEGKTMRVTAGSVVYVNSNEEHGWKNPGPEKAQYFVIALGKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15303; Mature: 15303
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSRRQMAGLLPALAAAQTAEKKAKPVLTSKTYLYEDMPVKPNGTNATRAVFDGKNHSG CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCCCC FGVELHITELGPGMAPHAPHHHVNEEALMLRSGQLDVTIEGKTMRVTAGSVVYVNSNEEH CEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCEEEEEECCCCC GWKNPGPEKAQYFVIALGKES CCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKLSRRQMAGLLPALAAAQTAEKKAKPVLTSKTYLYEDMPVKPNGTNATRAVFDGKNHSG CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCCCC FGVELHITELGPGMAPHAPHHHVNEEALMLRSGQLDVTIEGKTMRVTAGSVVYVNSNEEH CEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCEEEEEECCCCC GWKNPGPEKAQYFVIALGKES CCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA