| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ptk [H]
Identifier: 116623727
GI number: 116623727
Start: 5867604
End: 5869922
Strand: Direct
Name: ptk [H]
Synonym: Acid_4639
Alternate gene names: 116623727
Gene position: 5867604-5869922 (Clockwise)
Preceding gene: 116623726
Following gene: 116623728
Centisome position: 58.88
GC content: 58.43
Gene sequence:
>2319_bases ATGAACGATCATTACGAGCCCGAGTCGAACGGCTCAGGGCCGCATGGACTCCCTGTCGGGCCTGATGTTCGCATGCTCCC GAGCCCGAGCGACGGGTGGGTGCCGGAACCGACCAAGATCTCGTATTGGAAGATTGCCTGGGGGCACAAGTTCATTCTCC TTCTCTGTATATTCGCCGGAGCGCTCGGAGGTACCGCATACGTCATTCTAAAGACTCCGGAGTATGCGGCTGCGAGCACG GTCGAACTGATCGGCTTCAATCAGAGCTTCATGAATATGAGCCAGGTTGATCCCCAAGCCGGCACCGATATGACGACAGC TTCGGCCTCGAATATCCAGACGCAGACCCGTATTCTGACCAGTCGCAGCATGCTTGCTCGGGTAGCGGAGCGGATGAGCC TGGAGATGACCCCGATAGCGTCAACGCCCACGACGTTTTTTACCAAGCTGCGGGCACACATTCCTTTTGCGCAGAAAGAA CCGCTAGAACAGATGAAGGAGGCAGTGCGTACTGCCGCTTTCACTGTTTCGGCTCGAGGGGTAGGAGCAACCCGCCTGAT CGAACTTCGGTGCCAGTCGCCCTCGCCCGAAGTTGCCGCCAACTTCTTGAACACGCTGGCGGCGGAGCACATTTCGCAAA ACCTCGCCATCCGTTCAAGTGCGACTCAGCGAACCTCGCAGTGGATGGATTCACAGATGGAGGAAGCGAAGAGTCGGCTA CAGACGGCGGGGGAGAAGCTTCGGGACTTTGTGCGGCAGTCGGGGATGGATTTCTTTCCCGAGCAATCGACGCTGGCCGA CAGCAAGATGAAGGTGTTGCAGGGTGACTTGGCTGCGATCCAGGCTGACCGAATTGCGAAGCAGGCTCGCTGGGAGATGG CAAAGAATACTCCCATAGATAGTTTGCCGGATGTCTTGAGCGATCCTACGCTCCTGGGACTGAAATCACGGATCGTCGAC CTGCGTCGCGAGATGGCGCAACTAACTGCGACCTTGACCCCGGAGCACTACAAGGTGCAGAAGATCCAGGCGCAGATTTC GGAGTTGCAGCAAACGCTGGACAAAGAGAAGACTGGCTTACTTAAGCGACTGGATAACGATTACCAGGAAGCCCTTCGCC GTGAGAAGTTGCTGAGTGGCGCATACAACGCGCAGACGCATGCCGTCGGGGCCCAGGCGGACAAGGCGTCCCAGTACGCG ATGTTGAAGCGCGATGCTGAGATGGCACAGCAGGTCTACAATGGCCTCTTGCAACAGGCCAATCAGGCAGCGCTGATTGC TCTGGTGCCCGCTAGCAACATCCGGGTGGTGGATGCCGCGGTGGCGGACAATATCCCGTCCAGTCCGACGCCAATGCGCG ACATTCCTACTTGGTCGCTTTTCGGCGGAGCCTTATGCTATGGGTTGCTGTGGTTCCGCGAAGTGCTACGCCGTAAGCGA CTGACGCAACTCTTTGAGTCTCCAGGCCACACCAGGACGATTCTGGGCGTACCGGAATTGGGCGTGATTCCTTCCGCGAC GATTGATCGGCCAAAGAAACTCGCCGCCGCGCAGCGCGCGCTGAACGGCGCCACAAGTATTCATCCCCTCGGAACATTAG TCGAAGACGGGCAGAAAACACTCGAATTCGCGACGTGGCAGAACAAATCGTCGATTCTGGCCGAGTCATTCCGACAGACG CTGACTTCGATTCTGCGGGCCCAGCCCAAGGGCGAATGCCCGGTTTACGTAATCACGAGCGGCGGACCCGGCGAAGGCAA GACGACGCTCAGCGCAAATCTGGCAATCGCGATGGCCATGATCGGACAGCGTGTATTGCTGATTGATGCCGACTTGCGGC GGGCGCGTCTCCATTCGGTATTCGGGTTGGATAACTGCCCTGGCCTGAGCGATCTGCTGACATCCACGGAATCGTTGGAG GAAGCGGATCTGGCTCCGTATCTCAGTCCAACTAAGGTGGACAATCTGCGCGTCATGACGCACGGTTTGGCGCAGGTCGG CACACCCGCCACGTTGTTCTTTTCGCCGCGAGTGAAAGAACTAGTCAAGAAACTGCGGGGGCAGTTCGACTACATCCTGC TGGACACCGCGCCAGTTCTGTTATTCCCCGATGCCCGGCTGTGGGGAAGGCACTCGGACGGAGTGGTCCTCGTGGTCAGG GCGGGCGTAACGACGCGCGAGGGCGCGACGAGCGCCTGTCAGCGATTCGCCGAGGATGGCATCGCAGTGCTGGGAACGAT CCTGAATGACTGGACGCCGAAGGAAGGGTCGCCCAGCCACTATTACTATCACAGTTATGAGGCCTACGGGCAAAAATAG
Upstream 100 bases:
>100_bases GGACTGAAGCACAACCTGGGCAAGACCATGCTAGTGGTGCTGCCGGTGGCAGGCACGATCGCCAGCCTTGCTATCGCGTT TACACGTTAGGATCTCTAGA
Downstream 100 bases:
>100_bases CGCTCGAGTGGAAACGGCTTCGTCGGAAAACTCAGATCGGTAGAGGGTGGCGGCCGGGACCGTAGAGGCCGATTAGAATT GGCTCAGGGAACAGCGAATA
Product: lipopolysaccharide biosynthesis
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MNDHYEPESNGSGPHGLPVGPDVRMLPSPSDGWVPEPTKISYWKIAWGHKFILLLCIFAGALGGTAYVILKTPEYAAAST VELIGFNQSFMNMSQVDPQAGTDMTTASASNIQTQTRILTSRSMLARVAERMSLEMTPIASTPTTFFTKLRAHIPFAQKE PLEQMKEAVRTAAFTVSARGVGATRLIELRCQSPSPEVAANFLNTLAAEHISQNLAIRSSATQRTSQWMDSQMEEAKSRL QTAGEKLRDFVRQSGMDFFPEQSTLADSKMKVLQGDLAAIQADRIAKQARWEMAKNTPIDSLPDVLSDPTLLGLKSRIVD LRREMAQLTATLTPEHYKVQKIQAQISELQQTLDKEKTGLLKRLDNDYQEALRREKLLSGAYNAQTHAVGAQADKASQYA MLKRDAEMAQQVYNGLLQQANQAALIALVPASNIRVVDAAVADNIPSSPTPMRDIPTWSLFGGALCYGLLWFREVLRRKR LTQLFESPGHTRTILGVPELGVIPSATIDRPKKLAAAQRALNGATSIHPLGTLVEDGQKTLEFATWQNKSSILAESFRQT LTSILRAQPKGECPVYVITSGGPGEGKTTLSANLAIAMAMIGQRVLLIDADLRRARLHSVFGLDNCPGLSDLLTSTESLE EADLAPYLSPTKVDNLRVMTHGLAQVGTPATLFFSPRVKELVKKLRGQFDYILLDTAPVLLFPDARLWGRHSDGVVLVVR AGVTTREGATSACQRFAEDGIAVLGTILNDWTPKEGSPSHYYYHSYEAYGQK
Sequences:
>Translated_772_residues MNDHYEPESNGSGPHGLPVGPDVRMLPSPSDGWVPEPTKISYWKIAWGHKFILLLCIFAGALGGTAYVILKTPEYAAAST VELIGFNQSFMNMSQVDPQAGTDMTTASASNIQTQTRILTSRSMLARVAERMSLEMTPIASTPTTFFTKLRAHIPFAQKE PLEQMKEAVRTAAFTVSARGVGATRLIELRCQSPSPEVAANFLNTLAAEHISQNLAIRSSATQRTSQWMDSQMEEAKSRL QTAGEKLRDFVRQSGMDFFPEQSTLADSKMKVLQGDLAAIQADRIAKQARWEMAKNTPIDSLPDVLSDPTLLGLKSRIVD LRREMAQLTATLTPEHYKVQKIQAQISELQQTLDKEKTGLLKRLDNDYQEALRREKLLSGAYNAQTHAVGAQADKASQYA MLKRDAEMAQQVYNGLLQQANQAALIALVPASNIRVVDAAVADNIPSSPTPMRDIPTWSLFGGALCYGLLWFREVLRRKR LTQLFESPGHTRTILGVPELGVIPSATIDRPKKLAAAQRALNGATSIHPLGTLVEDGQKTLEFATWQNKSSILAESFRQT LTSILRAQPKGECPVYVITSGGPGEGKTTLSANLAIAMAMIGQRVLLIDADLRRARLHSVFGLDNCPGLSDLLTSTESLE EADLAPYLSPTKVDNLRVMTHGLAQVGTPATLFFSPRVKELVKKLRGQFDYILLDTAPVLLFPDARLWGRHSDGVVLVVR AGVTTREGATSACQRFAEDGIAVLGTILNDWTPKEGSPSHYYYHSYEAYGQK >Mature_772_residues MNDHYEPESNGSGPHGLPVGPDVRMLPSPSDGWVPEPTKISYWKIAWGHKFILLLCIFAGALGGTAYVILKTPEYAAAST VELIGFNQSFMNMSQVDPQAGTDMTTASASNIQTQTRILTSRSMLARVAERMSLEMTPIASTPTTFFTKLRAHIPFAQKE PLEQMKEAVRTAAFTVSARGVGATRLIELRCQSPSPEVAANFLNTLAAEHISQNLAIRSSATQRTSQWMDSQMEEAKSRL QTAGEKLRDFVRQSGMDFFPEQSTLADSKMKVLQGDLAAIQADRIAKQARWEMAKNTPIDSLPDVLSDPTLLGLKSRIVD LRREMAQLTATLTPEHYKVQKIQAQISELQQTLDKEKTGLLKRLDNDYQEALRREKLLSGAYNAQTHAVGAQADKASQYA MLKRDAEMAQQVYNGLLQQANQAALIALVPASNIRVVDAAVADNIPSSPTPMRDIPTWSLFGGALCYGLLWFREVLRRKR LTQLFESPGHTRTILGVPELGVIPSATIDRPKKLAAAQRALNGATSIHPLGTLVEDGQKTLEFATWQNKSSILAESFRQT LTSILRAQPKGECPVYVITSGGPGEGKTTLSANLAIAMAMIGQRVLLIDADLRRARLHSVFGLDNCPGLSDLLTSTESLE EADLAPYLSPTKVDNLRVMTHGLAQVGTPATLFFSPRVKELVKKLRGQFDYILLDTAPVLLFPDARLWGRHSDGVVLVVR AGVTTREGATSACQRFAEDGIAVLGTILNDWTPKEGSPSHYYYHSYEAYGQK
Specific function: May be involved in the production and the transport of exopolysaccharides [H]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=429, Percent_Identity=27.972027972028, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1787216, Length=672, Percent_Identity=24.1071428571429, Blast_Score=134, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 84675; Mature: 84675
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHYEPESNGSGPHGLPVGPDVRMLPSPSDGWVPEPTKISYWKIAWGHKFILLLCIFAG CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH ALGGTAYVILKTPEYAAASTVELIGFNQSFMNMSQVDPQAGTDMTTASASNIQTQTRILT HCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH SRSMLARVAERMSLEMTPIASTPTTFFTKLRAHIPFAQKEPLEQMKEAVRTAAFTVSARG HHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCC VGATRLIELRCQSPSPEVAANFLNTLAAEHISQNLAIRSSATQRTSQWMDSQMEEAKSRL CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QTAGEKLRDFVRQSGMDFFPEQSTLADSKMKVLQGDLAAIQADRIAKQARWEMAKNTPID HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLPDVLSDPTLLGLKSRIVDLRREMAQLTATLTPEHYKVQKIQAQISELQQTLDKEKTGL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKRLDNDYQEALRREKLLSGAYNAQTHAVGAQADKASQYAMLKRDAEMAQQVYNGLLQQA HHHHCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NQAALIALVPASNIRVVDAAVADNIPSSPTPMRDIPTWSLFGGALCYGLLWFREVLRRKR CCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTQLFESPGHTRTILGVPELGVIPSATIDRPKKLAAAQRALNGATSIHPLGTLVEDGQKT HHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHH LEFATWQNKSSILAESFRQTLTSILRAQPKGECPVYVITSGGPGEGKTTLSANLAIAMAM HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHH IGQRVLLIDADLRRARLHSVFGLDNCPGLSDLLTSTESLEEADLAPYLSPTKVDNLRVMT HCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH HGLAQVGTPATLFFSPRVKELVKKLRGQFDYILLDTAPVLLFPDARLWGRHSDGVVLVVR HHHHHCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCCEEEECCCHHCCCCCCCEEEEEE AGVTTREGATSACQRFAEDGIAVLGTILNDWTPKEGSPSHYYYHSYEAYGQK CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECHHHCCCC >Mature Secondary Structure MNDHYEPESNGSGPHGLPVGPDVRMLPSPSDGWVPEPTKISYWKIAWGHKFILLLCIFAG CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH ALGGTAYVILKTPEYAAASTVELIGFNQSFMNMSQVDPQAGTDMTTASASNIQTQTRILT HCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH SRSMLARVAERMSLEMTPIASTPTTFFTKLRAHIPFAQKEPLEQMKEAVRTAAFTVSARG HHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCC VGATRLIELRCQSPSPEVAANFLNTLAAEHISQNLAIRSSATQRTSQWMDSQMEEAKSRL CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QTAGEKLRDFVRQSGMDFFPEQSTLADSKMKVLQGDLAAIQADRIAKQARWEMAKNTPID HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLPDVLSDPTLLGLKSRIVDLRREMAQLTATLTPEHYKVQKIQAQISELQQTLDKEKTGL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKRLDNDYQEALRREKLLSGAYNAQTHAVGAQADKASQYAMLKRDAEMAQQVYNGLLQQA HHHHCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NQAALIALVPASNIRVVDAAVADNIPSSPTPMRDIPTWSLFGGALCYGLLWFREVLRRKR CCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTQLFESPGHTRTILGVPELGVIPSATIDRPKKLAAAQRALNGATSIHPLGTLVEDGQKT HHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHH LEFATWQNKSSILAESFRQTLTSILRAQPKGECPVYVITSGGPGEGKTTLSANLAIAMAM HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHH IGQRVLLIDADLRRARLHSVFGLDNCPGLSDLLTSTESLEEADLAPYLSPTKVDNLRVMT HCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH HGLAQVGTPATLFFSPRVKELVKKLRGQFDYILLDTAPVLLFPDARLWGRHSDGVVLVVR HHHHHCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCCEEEECCCHHCCCCCCCEEEEEE AGVTTREGATSACQRFAEDGIAVLGTILNDWTPKEGSPSHYYYHSYEAYGQK CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9434192; 8683591; 10069388 [H]