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The map label for this gene is atoS [C]

Identifier: 116623716

GI number: 116623716

Start: 5855189

End: 5857657

Strand: Direct

Name: atoS [C]

Synonym: Acid_4628

Alternate gene names: 116623716

Gene position: 5855189-5857657 (Clockwise)

Preceding gene: 116623715

Following gene: 116623718

Centisome position: 58.75

GC content: 61.85

Gene sequence:

>2469_bases
ATGAAACGCATCTGTACCGACCCGGCCGAAGATCGCCATGCCAGGGCCCTCCGATACGGCTGCGCGGCGCTCGCGCTCGC
CTTGTGTCTGGCGTTGGTTCGGTCTGCTCTCGTGACTCACGCGCTCCACATCCCCCTGTTCTTTAACCTGCTCGTGGTCC
TTGGAGCGCTGGTGTTGAACCTTGCCGGCAATACAATCTGGCCAGCCAGGCTAATCGCTTTCGGCACGCTGCTCTCCACC
GCGCTGATGGTGACGCTGGCGCGCGACGGCTTCCGCAGCATCGTCATGCTGATCTTTCCAGGAGTCTTGCTGATCGGCGT
GATGATGTTCAATTGTCTCGACTATTCCCTGGTGTCGCTGGCAACCCTGTTGACCGTAACTTGCCTCGGCATCGCGGAGA
TGCACGGTGTGATCCCGCTGGTGCCGATCGTGCGGACTACTACCGACCCACCCACCATCTTCATGGTGGATTTGATTCTT
GCGGTGCTGGCGTTCTTCGGCCGGCGGCTGACACTTGATGCAAGGCGCAATCTTGCAGAACTCCGCGCCTCCGCGGCGCG
GCTGGCGGAAGCCAACCAGGAGTTGAAATTCTCCGAGGCAAGATATCGCCGCTTTATCGAGCTGGCTGTAGAAGCGATTT
TTGTCGTGGATTCGAAAGGCGCCATCATCGAAGTAAACCGAGAGGCTACGGCGCTCACGGGAATCGCGCGTGAAAGGCTG
CTCGGCTCCTCCATGATGTCTCTCTTCGCGGCCGGCGAATCGTCTGAGGACGCCTTTCCGCTGGACGTGCTGGCCCAGGG
CGTTCCGATCATGCGGCTCTGCCGTATCCACCGGCCGGATGGCGCGGTAGTGGAGGCCGAAGCGCATTCCGCCATGCTGC
CCGAAGGCATGATCCTCTGCTTCTGCCGCGACTTGAAGGAACGCAAGCAGGCTGAGGACGATCGCAAGAAATTGGAAGAG
CAGCTGGTGCAGGCGCAGAAGATGGAATCGATCGGACGTCTGGCCGGCGGTGTAGCGCACGATTTCAACAATCTGTTGAC
AGTGATCAACGGTTACAGCCGGATGCTGCTGGATGCACCGCCCTCGGAGCCACCGGAGCGCGACAGCCTGGAAGAGATCC
ACCGCGCCGGAGAGCGCGCCGCCGGCCTGACCCAGCAACTGCTGGCATTCAGCCGCAAGCAGATTCTGCAGCCGCGCGTG
CTTGATTGCAGTCGCGTGGTGCGGGAGATTCAATCGATGCTGGTACGGCTGGTGGGGGAAGACATCGACCTGAAAGTCAC
TTTATGTGACGCCCCGGCCACTGTGTGCGCCGATCGTCATCAGTTGGAGCAGGTGATTATGAACTTGGCAGTGAACGCCC
GGGATGCCATGCCGCGCGGCGGGACGATGCACATCGAGACGTCCATGATGGAAGGCTCCGTGTCCCACGTGACGCTTGCG
GTCAGCGACAGCGGAGCGGGCATGGGTGAGGAGCAGCAGCGCCGGATTTTCGAGCCATTCTTTACCACCAAAGAGATCGG
CAAGGGAACCGGACTGGGTCTCTCCATCATCCAGGGCATTGTGCAGCAGAGCGGAGGCTCGATCGAAGTGGAGAGTGAAC
CGGGGTGCGGGTCGACCTTCCGGATCTTCCTGCCGAAGGTAGCGGCTGTGGACGGCGACGCAGACCCGGAGTTCCCGCGG
TTCGAAGAGGTCCGGGGGAGCGAGACCGTGCTGGTGGTGGAGGATCAGGAAGAAGTCCGCCGGTTTGCGGCCGGCGCCCT
GCGGACATACGGCTACCGGGTAATCGCGGTGGAGAGCGGCGCGGAGGCACTGGCAGTCTGCGAACGGGAAGCCATCGACC
TGCTCCTCACCGATATCGTGATGCCGAATCTCAACGGCAGAGAGTTGGCGGAGCTGGTATCCAAACGCTGGCCTGGAATC
AAGGTCCTGTTCATGTCGGCCTACGCCGGCGGCACCGACATGAATGGCGGCGTCCTACGGAACGGGACGGCGTTCATCCA
AAAGCCGTTCCTGGCAGTCCAACTCGCGGAGAAGGTGCGGCGTACGCTGGCGGCTCCAGCCCGGCAGGCTCGTATCCTGA
TCGCCGACGATGAGGCCGGAGTCAGGGGCTTTCTGCGCGCGGCGTTGGAGCAGCAAGGCTACGAGGTGATGGAGGCCGCG
GACGGCAAGCAGGCGATCCGCCAGATTCAGGACAACGCGGTGGATCTTCTCATCACCGACCTGGTGATGCCCGAACAGGA
GGGAATCGAAACGATCCGGGCACTTCATAAGGAGATGGCAGGTATCGGCATCATCGCGATCTCAGGAGCTTTCGGCGGCC
AGTTCCTCCGGTCGGCACGGTTGCTGGGCGCTCACGCTGTGCTCTCGAAGCCGGTGGCTGTGAATGCGCTGCTGAGCACC
GTTGCGGACGTGCTGAAACAAGTGAACCCTACTTCTTCTCTCCAGCCGCTGGTTCCGGGTACTTCGTAG

Upstream 100 bases:

>100_bases
TCTGGCAGGGCGGAGAGAGCATGGCGGAGTTGTTCGCGCGCGCCGACCGGGACATGTACCAGGAGAAGAATGCCGTCAGG
CAGCGGGAGGCGAAACCGGC

Downstream 100 bases:

>100_bases
CCTGGCGGGCTACGAGTTGCCAGCCGGCGGGCGCTTTCACCAGGACGTGGAGCACGTGCAGGTGCGTCGAGCTTACTGCT
CCGCCGTTGTTGCTGCGCGA

Product: PAS/PAC sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MKRICTDPAEDRHARALRYGCAALALALCLALVRSALVTHALHIPLFFNLLVVLGALVLNLAGNTIWPARLIAFGTLLST
ALMVTLARDGFRSIVMLIFPGVLLIGVMMFNCLDYSLVSLATLLTVTCLGIAEMHGVIPLVPIVRTTTDPPTIFMVDLIL
AVLAFFGRRLTLDARRNLAELRASAARLAEANQELKFSEARYRRFIELAVEAIFVVDSKGAIIEVNREATALTGIARERL
LGSSMMSLFAAGESSEDAFPLDVLAQGVPIMRLCRIHRPDGAVVEAEAHSAMLPEGMILCFCRDLKERKQAEDDRKKLEE
QLVQAQKMESIGRLAGGVAHDFNNLLTVINGYSRMLLDAPPSEPPERDSLEEIHRAGERAAGLTQQLLAFSRKQILQPRV
LDCSRVVREIQSMLVRLVGEDIDLKVTLCDAPATVCADRHQLEQVIMNLAVNARDAMPRGGTMHIETSMMEGSVSHVTLA
VSDSGAGMGEEQQRRIFEPFFTTKEIGKGTGLGLSIIQGIVQQSGGSIEVESEPGCGSTFRIFLPKVAAVDGDADPEFPR
FEEVRGSETVLVVEDQEEVRRFAAGALRTYGYRVIAVESGAEALAVCEREAIDLLLTDIVMPNLNGRELAELVSKRWPGI
KVLFMSAYAGGTDMNGGVLRNGTAFIQKPFLAVQLAEKVRRTLAAPARQARILIADDEAGVRGFLRAALEQQGYEVMEAA
DGKQAIRQIQDNAVDLLITDLVMPEQEGIETIRALHKEMAGIGIIAISGAFGGQFLRSARLLGAHAVLSKPVAVNALLST
VADVLKQVNPTSSLQPLVPGTS

Sequences:

>Translated_822_residues
MKRICTDPAEDRHARALRYGCAALALALCLALVRSALVTHALHIPLFFNLLVVLGALVLNLAGNTIWPARLIAFGTLLST
ALMVTLARDGFRSIVMLIFPGVLLIGVMMFNCLDYSLVSLATLLTVTCLGIAEMHGVIPLVPIVRTTTDPPTIFMVDLIL
AVLAFFGRRLTLDARRNLAELRASAARLAEANQELKFSEARYRRFIELAVEAIFVVDSKGAIIEVNREATALTGIARERL
LGSSMMSLFAAGESSEDAFPLDVLAQGVPIMRLCRIHRPDGAVVEAEAHSAMLPEGMILCFCRDLKERKQAEDDRKKLEE
QLVQAQKMESIGRLAGGVAHDFNNLLTVINGYSRMLLDAPPSEPPERDSLEEIHRAGERAAGLTQQLLAFSRKQILQPRV
LDCSRVVREIQSMLVRLVGEDIDLKVTLCDAPATVCADRHQLEQVIMNLAVNARDAMPRGGTMHIETSMMEGSVSHVTLA
VSDSGAGMGEEQQRRIFEPFFTTKEIGKGTGLGLSIIQGIVQQSGGSIEVESEPGCGSTFRIFLPKVAAVDGDADPEFPR
FEEVRGSETVLVVEDQEEVRRFAAGALRTYGYRVIAVESGAEALAVCEREAIDLLLTDIVMPNLNGRELAELVSKRWPGI
KVLFMSAYAGGTDMNGGVLRNGTAFIQKPFLAVQLAEKVRRTLAAPARQARILIADDEAGVRGFLRAALEQQGYEVMEAA
DGKQAIRQIQDNAVDLLITDLVMPEQEGIETIRALHKEMAGIGIIAISGAFGGQFLRSARLLGAHAVLSKPVAVNALLST
VADVLKQVNPTSSLQPLVPGTS
>Mature_822_residues
MKRICTDPAEDRHARALRYGCAALALALCLALVRSALVTHALHIPLFFNLLVVLGALVLNLAGNTIWPARLIAFGTLLST
ALMVTLARDGFRSIVMLIFPGVLLIGVMMFNCLDYSLVSLATLLTVTCLGIAEMHGVIPLVPIVRTTTDPPTIFMVDLIL
AVLAFFGRRLTLDARRNLAELRASAARLAEANQELKFSEARYRRFIELAVEAIFVVDSKGAIIEVNREATALTGIARERL
LGSSMMSLFAAGESSEDAFPLDVLAQGVPIMRLCRIHRPDGAVVEAEAHSAMLPEGMILCFCRDLKERKQAEDDRKKLEE
QLVQAQKMESIGRLAGGVAHDFNNLLTVINGYSRMLLDAPPSEPPERDSLEEIHRAGERAAGLTQQLLAFSRKQILQPRV
LDCSRVVREIQSMLVRLVGEDIDLKVTLCDAPATVCADRHQLEQVIMNLAVNARDAMPRGGTMHIETSMMEGSVSHVTLA
VSDSGAGMGEEQQRRIFEPFFTTKEIGKGTGLGLSIIQGIVQQSGGSIEVESEPGCGSTFRIFLPKVAAVDGDADPEFPR
FEEVRGSETVLVVEDQEEVRRFAAGALRTYGYRVIAVESGAEALAVCEREAIDLLLTDIVMPNLNGRELAELVSKRWPGI
KVLFMSAYAGGTDMNGGVLRNGTAFIQKPFLAVQLAEKVRRTLAAPARQARILIADDEAGVRGFLRAALEQQGYEVMEAA
DGKQAIRQIQDNAVDLLITDLVMPEQEGIETIRALHKEMAGIGIIAISGAFGGQFLRSARLLGAHAVLSKPVAVNALLST
VADVLKQVNPTSSLQPLVPGTS

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=388, Percent_Identity=29.3814432989691, Blast_Score=142, Evalue=9e-35,
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=31.2252964426877, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI145693157, Length=544, Percent_Identity=25, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI48994928, Length=643, Percent_Identity=22.2395023328149, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=28.3261802575107, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI87081816, Length=329, Percent_Identity=27.355623100304, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1789149, Length=251, Percent_Identity=28.2868525896414, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1790300, Length=358, Percent_Identity=25.6983240223464, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786600, Length=371, Percent_Identity=23.1805929919137, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790861, Length=235, Percent_Identity=27.2340425531915, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=30.0395256916996, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 89149; Mature: 89149

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRICTDPAEDRHARALRYGCAALALALCLALVRSALVTHALHIPLFFNLLVVLGALVLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGNTIWPARLIAFGTLLSTALMVTLARDGFRSIVMLIFPGVLLIGVMMFNCLDYSLVSL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLLTVTCLGIAEMHGVIPLVPIVRTTTDPPTIFMVDLILAVLAFFGRRLTLDARRNLAE
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
LRASAARLAEANQELKFSEARYRRFIELAVEAIFVVDSKGAIIEVNREATALTGIARERL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHHHHHHHHH
LGSSMMSLFAAGESSEDAFPLDVLAQGVPIMRLCRIHRPDGAVVEAEAHSAMLPEGMILC
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEECCCHHHCCCCHHHHH
FCRDLKERKQAEDDRKKLEEQLVQAQKMESIGRLAGGVAHDFNNLLTVINGYSRMLLDAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PSEPPERDSLEEIHRAGERAAGLTQQLLAFSRKQILQPRVLDCSRVVREIQSMLVRLVGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DIDLKVTLCDAPATVCADRHQLEQVIMNLAVNARDAMPRGGTMHIETSMMEGSVSHVTLA
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHCCCCCEEEEE
VSDSGAGMGEEQQRRIFEPFFTTKEIGKGTGLGLSIIQGIVQQSGGSIEVESEPGCGSTF
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCH
RIFLPKVAAVDGDADPEFPRFEEVRGSETVLVVEDQEEVRRFAAGALRTYGYRVIAVESG
HEECCHHHCCCCCCCCCCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECC
AEALAVCEREAIDLLLTDIVMPNLNGRELAELVSKRWPGIKVLFMSAYAGGTDMNGGVLR
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEE
NGTAFIQKPFLAVQLAEKVRRTLAAPARQARILIADDEAGVRGFLRAALEQQGYEVMEAA
CCHHHHHCHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCHHHHHHHHHHHHCCHHHHHHC
DGKQAIRQIQDNAVDLLITDLVMPEQEGIETIRALHKEMAGIGIIAISGAFGGQFLRSAR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LLGAHAVLSKPVAVNALLSTVADVLKQVNPTSSLQPLVPGTS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRICTDPAEDRHARALRYGCAALALALCLALVRSALVTHALHIPLFFNLLVVLGALVLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGNTIWPARLIAFGTLLSTALMVTLARDGFRSIVMLIFPGVLLIGVMMFNCLDYSLVSL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLLTVTCLGIAEMHGVIPLVPIVRTTTDPPTIFMVDLILAVLAFFGRRLTLDARRNLAE
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
LRASAARLAEANQELKFSEARYRRFIELAVEAIFVVDSKGAIIEVNREATALTGIARERL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHHHHHHHHH
LGSSMMSLFAAGESSEDAFPLDVLAQGVPIMRLCRIHRPDGAVVEAEAHSAMLPEGMILC
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEECCCHHHCCCCHHHHH
FCRDLKERKQAEDDRKKLEEQLVQAQKMESIGRLAGGVAHDFNNLLTVINGYSRMLLDAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PSEPPERDSLEEIHRAGERAAGLTQQLLAFSRKQILQPRVLDCSRVVREIQSMLVRLVGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DIDLKVTLCDAPATVCADRHQLEQVIMNLAVNARDAMPRGGTMHIETSMMEGSVSHVTLA
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHCCCCCEEEEE
VSDSGAGMGEEQQRRIFEPFFTTKEIGKGTGLGLSIIQGIVQQSGGSIEVESEPGCGSTF
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCH
RIFLPKVAAVDGDADPEFPRFEEVRGSETVLVVEDQEEVRRFAAGALRTYGYRVIAVESG
HEECCHHHCCCCCCCCCCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECC
AEALAVCEREAIDLLLTDIVMPNLNGRELAELVSKRWPGIKVLFMSAYAGGTDMNGGVLR
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEE
NGTAFIQKPFLAVQLAEKVRRTLAAPARQARILIADDEAGVRGFLRAALEQQGYEVMEAA
CCHHHHHCHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCHHHHHHHHHHHHCCHHHHHHC
DGKQAIRQIQDNAVDLLITDLVMPEQEGIETIRALHKEMAGIGIIAISGAFGGQFLRSAR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LLGAHAVLSKPVAVNALLSTVADVLKQVNPTSSLQPLVPGTS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA