| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623707
Identifier: 116623707
GI number: 116623707
Start: 5838427
End: 5840658
Strand: Direct
Name: 116623707
Synonym: Acid_4619
Alternate gene names: NA
Gene position: 5838427-5840658 (Clockwise)
Preceding gene: 116623704
Following gene: 116623708
Centisome position: 58.59
GC content: 60.75
Gene sequence:
>2232_bases GTGACATCCGAACAACGGCCCGCGGCCGTTAAAGTAGTTGTGGCGACAACAGTAATGTTGTCCTTCATTTCGTTCTGGCG GGCCGCCGCCATTGTGCTCAGCGATCTGGCATCGAGCGCGTATTACGTCGGGGGAATCGCGGAAGGGGCAATCGGGAAGG CCGCGCCATGGTTCATCCTGGCGATCATGTTGTTCTCCTACGCGGTACGCGCGATTTACATCGAGAGCTGCTCGATGTTC GTGCGGGGCGGCGTATATAAGGTAGTCCACGAGGCCATGGGCGGAACGCTCGCCAAGTTCTCGGTTTCGGCGTTGATGTT CGACTATGTGTTGACCGGCCCGATCAGCGGCGTCAGCGCCGGCCTGTACCTGGGCGGACTGATCAACGAGATTGGCGAGA ACATGCACATGCCTTCCGTGCACGTTTACCCGCCATACTTCGCAGCGGTCTTCGCGATTGGCGTGACGCTTTACTTCTGG CGCAAGAACATCATCGGCATGCACGAATCCAGCGAGAAGGCGCTGCGCATTATGCAGATCACCACGGTGATGGTGGTGAT CCTGATTGTGTGGTGCGTGGTCACGATCCTTAAGGTGGGTTACCAGCCGGTGCCGCTGCCGGTGCCGGAAAATTTGAAAT TCAATCCTGACGCGCTGGGCTGGTTGAAGGGTACGGTGGCGCCTTCGATCACGGTGATTGCGATCCTGATCGGGCTGGGC CACTCGCTGCTGGCGATGAGCGGCGAAGAGAGCCTCGCGCAGGTAAATCGCGAGATCGCGCATCCGAAACTGAAGAACCT GGAGCGCGCGGGGTTCGTGATTTTCATCTACAGCATGATGTTTACGTCGCTGGTCTCGTTCTTCGCAGTGATGATCATTC CCGACGGACCGCGGCAGGGTTTTCTGGACAACCTGATCGGCGGGCTTTCGATGTACCTGGTGGGACCGCTGCCGCTGCGA CTGCTGTTCCACGGCTTCGTCGTGCTGGTGGGCACGCTGATTCTCTCGGGCGCCGTGAACACCGCGATCATCGGCTCCAA CGGCGTGCTCAATCGCGTGGCCGAGGACGGCGTGCTGCCGGACTGGTTCCGGCATCCGCACCACAAGTTCGGGACCACGT CACGCCTTATCAACCTGATCGTCATCCTGCAGGTGCTCACGATCGTGATCAGCCGCGGCGATATGGTAATGCTGGGGGAG GCCTATGCTTTCGGCGTGGTCTGGAGTTTCGCGATGAAGTCGCTGAGCGTGCTGATGCTGCGGTACAAGCAGCCGGGCGC GCGCGAATGGAAGGTGCCGTTGAACTTCCACATCGGCAAGACCGAGATCCCACTGGGGCTGATGATGATTACGGTGGCGC TGTTCGCGCTCGCGATCATCAACGTGCTCACCAAGAAAGTAGCCACGATTTCGGGCGTGACGTTCACGATCGCGTTTTTC ATTGTTTTCGAATGCAGCGATATCTACAATCGCAAACGCAAAGCCGGTCATTCGCAGGAGATGGAAAAGTTCCGGTTGGA TACGCATGCGGAGGTCTCCACCGAGAGCCTGAGCGTGCGGCCAGGCAACGTGCTGGTGGCGGTGCGGAATCCCAACCGGC TGCAGCACCTGGCGCGGATTCTGAAGAAGACCGACACGCGCAAGATGGATATCGTGGTGCTCTCGGTGCGCAACACGACG CAGGCCGGCAGCGGCGAACACTCGCTGGATGCGGCGCAGATTTTCTCCGACGCCGAGACAACAGTGTTCAGCAAAGTGGT GATGCTGGCGGAGAAGGCCGGCAAGCACGTGGAATTAATGGTGGTGCCGGGCAACGATCCCTACGAGGCGGTGGTGCAGA CGGCGGGACTGCTGCAATCCTCGCGCATCGTGATGGGGCTCTCGCCGAAGCTGACGCCGAGCGAGCAGGGCGCGCAGGTC GGGGAATATTGGGAGAAGCTGCCGGAGCCGCGGCCATCGCTATCGCTGGAGCTGGTGCTGGAGAATCAGAAGGACGTGGT GTTCTTCAACCTGGGCCCGCATCCGCCGCGGCTGTGGCCAGAGGATATCGATCTTACGCACAGGCTCTGGCTGGATCTGA GCGCACGCGGTCCGGGGGCGAAGCTGCATCATCGCGATGTGATCAGCGTGGCGCTGCGGCGGATGGCGACGGAGTTGCAG TCGCCCCGCGCGGGCGAGGTGGTGGACGATATCGTGCGGGAAGCGATCGGGCACCCGTCGCCGGATGAGTAA
Upstream 100 bases:
>100_bases GCAGTCCGCAAGGACGGAGTACTTTCAAGCTCTAGCCCGACAGCTAACCCCGTAGGCGGATTTGAGAGTCACCCTGATGG GTGATCGAGGAGCTATTTCC
Downstream 100 bases:
>100_bases GAGATCGCTCCCTCACGGTCGCGGTTCGCGTGTGGCGCAATTAGAATAGGAAAGTGAACGCTTTGACGCGCGAGCTGCTG GTCTGGGTCGCGGCGCGGCC
Product: amino acid transporter
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease Family Protein; Amino Acid Permease-Associated Region
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MTSEQRPAAVKVVVATTVMLSFISFWRAAAIVLSDLASSAYYVGGIAEGAIGKAAPWFILAIMLFSYAVRAIYIESCSMF VRGGVYKVVHEAMGGTLAKFSVSALMFDYVLTGPISGVSAGLYLGGLINEIGENMHMPSVHVYPPYFAAVFAIGVTLYFW RKNIIGMHESSEKALRIMQITTVMVVILIVWCVVTILKVGYQPVPLPVPENLKFNPDALGWLKGTVAPSITVIAILIGLG HSLLAMSGEESLAQVNREIAHPKLKNLERAGFVIFIYSMMFTSLVSFFAVMIIPDGPRQGFLDNLIGGLSMYLVGPLPLR LLFHGFVVLVGTLILSGAVNTAIIGSNGVLNRVAEDGVLPDWFRHPHHKFGTTSRLINLIVILQVLTIVISRGDMVMLGE AYAFGVVWSFAMKSLSVLMLRYKQPGAREWKVPLNFHIGKTEIPLGLMMITVALFALAIINVLTKKVATISGVTFTIAFF IVFECSDIYNRKRKAGHSQEMEKFRLDTHAEVSTESLSVRPGNVLVAVRNPNRLQHLARILKKTDTRKMDIVVLSVRNTT QAGSGEHSLDAAQIFSDAETTVFSKVVMLAEKAGKHVELMVVPGNDPYEAVVQTAGLLQSSRIVMGLSPKLTPSEQGAQV GEYWEKLPEPRPSLSLELVLENQKDVVFFNLGPHPPRLWPEDIDLTHRLWLDLSARGPGAKLHHRDVISVALRRMATELQ SPRAGEVVDDIVREAIGHPSPDE
Sequences:
>Translated_743_residues MTSEQRPAAVKVVVATTVMLSFISFWRAAAIVLSDLASSAYYVGGIAEGAIGKAAPWFILAIMLFSYAVRAIYIESCSMF VRGGVYKVVHEAMGGTLAKFSVSALMFDYVLTGPISGVSAGLYLGGLINEIGENMHMPSVHVYPPYFAAVFAIGVTLYFW RKNIIGMHESSEKALRIMQITTVMVVILIVWCVVTILKVGYQPVPLPVPENLKFNPDALGWLKGTVAPSITVIAILIGLG HSLLAMSGEESLAQVNREIAHPKLKNLERAGFVIFIYSMMFTSLVSFFAVMIIPDGPRQGFLDNLIGGLSMYLVGPLPLR LLFHGFVVLVGTLILSGAVNTAIIGSNGVLNRVAEDGVLPDWFRHPHHKFGTTSRLINLIVILQVLTIVISRGDMVMLGE AYAFGVVWSFAMKSLSVLMLRYKQPGAREWKVPLNFHIGKTEIPLGLMMITVALFALAIINVLTKKVATISGVTFTIAFF IVFECSDIYNRKRKAGHSQEMEKFRLDTHAEVSTESLSVRPGNVLVAVRNPNRLQHLARILKKTDTRKMDIVVLSVRNTT QAGSGEHSLDAAQIFSDAETTVFSKVVMLAEKAGKHVELMVVPGNDPYEAVVQTAGLLQSSRIVMGLSPKLTPSEQGAQV GEYWEKLPEPRPSLSLELVLENQKDVVFFNLGPHPPRLWPEDIDLTHRLWLDLSARGPGAKLHHRDVISVALRRMATELQ SPRAGEVVDDIVREAIGHPSPDE >Mature_742_residues TSEQRPAAVKVVVATTVMLSFISFWRAAAIVLSDLASSAYYVGGIAEGAIGKAAPWFILAIMLFSYAVRAIYIESCSMFV RGGVYKVVHEAMGGTLAKFSVSALMFDYVLTGPISGVSAGLYLGGLINEIGENMHMPSVHVYPPYFAAVFAIGVTLYFWR KNIIGMHESSEKALRIMQITTVMVVILIVWCVVTILKVGYQPVPLPVPENLKFNPDALGWLKGTVAPSITVIAILIGLGH SLLAMSGEESLAQVNREIAHPKLKNLERAGFVIFIYSMMFTSLVSFFAVMIIPDGPRQGFLDNLIGGLSMYLVGPLPLRL LFHGFVVLVGTLILSGAVNTAIIGSNGVLNRVAEDGVLPDWFRHPHHKFGTTSRLINLIVILQVLTIVISRGDMVMLGEA YAFGVVWSFAMKSLSVLMLRYKQPGAREWKVPLNFHIGKTEIPLGLMMITVALFALAIINVLTKKVATISGVTFTIAFFI VFECSDIYNRKRKAGHSQEMEKFRLDTHAEVSTESLSVRPGNVLVAVRNPNRLQHLARILKKTDTRKMDIVVLSVRNTTQ AGSGEHSLDAAQIFSDAETTVFSKVVMLAEKAGKHVELMVVPGNDPYEAVVQTAGLLQSSRIVMGLSPKLTPSEQGAQVG EYWEKLPEPRPSLSLELVLENQKDVVFFNLGPHPPRLWPEDIDLTHRLWLDLSARGPGAKLHHRDVISVALRRMATELQS PRAGEVVDDIVREAIGHPSPDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81486; Mature: 81355
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEQRPAAVKVVVATTVMLSFISFWRAAAIVLSDLASSAYYVGGIAEGAIGKAAPWFIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHH AIMLFSYAVRAIYIESCSMFVRGGVYKVVHEAMGGTLAKFSVSALMFDYVLTGPISGVSA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHH GLYLGGLINEIGENMHMPSVHVYPPYFAAVFAIGVTLYFWRKNIIGMHESSEKALRIMQI HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TTVMVVILIVWCVVTILKVGYQPVPLPVPENLKFNPDALGWLKGTVAPSITVIAILIGLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCC HSLLAMSGEESLAQVNREIAHPKLKNLERAGFVIFIYSMMFTSLVSFFAVMIIPDGPRQG HHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC FLDNLIGGLSMYLVGPLPLRLLFHGFVVLVGTLILSGAVNTAIIGSNGVLNRVAEDGVLP HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCC DWFRHPHHKFGTTSRLINLIVILQVLTIVISRGDMVMLGEAYAFGVVWSFAMKSLSVLML HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHH RYKQPGAREWKVPLNFHIGKTEIPLGLMMITVALFALAIINVLTKKVATISGVTFTIAFF HHCCCCCCCEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IVFECSDIYNRKRKAGHSQEMEKFRLDTHAEVSTESLSVRPGNVLVAVRNPNRLQHLARI HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHH LKKTDTRKMDIVVLSVRNTTQAGSGEHSLDAAQIFSDAETTVFSKVVMLAEKAGKHVELM HHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE VVPGNDPYEAVVQTAGLLQSSRIVMGLSPKLTPSEQGAQVGEYWEKLPEPRPSLSLELVL EECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE ENQKDVVFFNLGPHPPRLWPEDIDLTHRLWLDLSARGPGAKLHHRDVISVALRRMATELQ ECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC SPRAGEVVDDIVREAIGHPSPDE CCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSEQRPAAVKVVVATTVMLSFISFWRAAAIVLSDLASSAYYVGGIAEGAIGKAAPWFIL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHH AIMLFSYAVRAIYIESCSMFVRGGVYKVVHEAMGGTLAKFSVSALMFDYVLTGPISGVSA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHH GLYLGGLINEIGENMHMPSVHVYPPYFAAVFAIGVTLYFWRKNIIGMHESSEKALRIMQI HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TTVMVVILIVWCVVTILKVGYQPVPLPVPENLKFNPDALGWLKGTVAPSITVIAILIGLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCC HSLLAMSGEESLAQVNREIAHPKLKNLERAGFVIFIYSMMFTSLVSFFAVMIIPDGPRQG HHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC FLDNLIGGLSMYLVGPLPLRLLFHGFVVLVGTLILSGAVNTAIIGSNGVLNRVAEDGVLP HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCC DWFRHPHHKFGTTSRLINLIVILQVLTIVISRGDMVMLGEAYAFGVVWSFAMKSLSVLML HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHH RYKQPGAREWKVPLNFHIGKTEIPLGLMMITVALFALAIINVLTKKVATISGVTFTIAFF HHCCCCCCCEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IVFECSDIYNRKRKAGHSQEMEKFRLDTHAEVSTESLSVRPGNVLVAVRNPNRLQHLARI HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHH LKKTDTRKMDIVVLSVRNTTQAGSGEHSLDAAQIFSDAETTVFSKVVMLAEKAGKHVELM HHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE VVPGNDPYEAVVQTAGLLQSSRIVMGLSPKLTPSEQGAQVGEYWEKLPEPRPSLSLELVL EECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE ENQKDVVFFNLGPHPPRLWPEDIDLTHRLWLDLSARGPGAKLHHRDVISVALRRMATELQ ECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC SPRAGEVVDDIVREAIGHPSPDE CCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA