Click here to switch to the map view.

The map label for this gene is mhqR [H]

Identifier: 116623682

GI number: 116623682

Start: 5809612

End: 5810052

Strand: Reverse

Name: mhqR [H]

Synonym: Acid_4594

Alternate gene names: 116623682

Gene position: 5810052-5809612 (Counterclockwise)

Preceding gene: 116623684

Following gene: 116623680

Centisome position: 58.3

GC content: 64.17

Gene sequence:

>441_bases
ATGGATTCCTCCGGTGTCCACCTCTGGCTTGTGCTGTGGAAGGCGTACGAATCCTTGCATGCCCATGCCATCCGGCACAT
CCAGTCGCTCGGGTTGGGATTTTCCGATTTCAGCGTACTGGAAGTCCTGCTCCACAAAGGGCCGACTCCGGTGAATACCA
TCGGGGAAATGGTGCACTTGACGAGCGGGTCGATCACGGTGGCAGTGGACCGGATGGAGGCCAAAGGGCTGGTGCAGCGC
TGCAACCACCCGAGCGATCGCCGGACGCGCGTGGTGCACCTTACGGAGGCCGGGGCAAAGCTGATCCGGTGCGCGTTCGC
CGATCACGAGGCCGCGATGGAGCGGGCGGCGGCCGGACTGACGCTTGCCGAGCGGGAGCAGGCCATCGGGCTGCTCAAGA
AGTTAGGACTGCGGGCCCGGGCCGGTTTGGATCAGACCTGA

Upstream 100 bases:

>100_bases
TCCGTGCGCTCCAAGAGTTACCAGCGGCGTAAAACGAACATTCAACAGGGCCGAATTGACCTTGCCTTCACATCAAGATA
ATCGGTGATATAGTTGGCTC

Downstream 100 bases:

>100_bases
AGGCGCTTGCGCGCGTCCACCATCGTCCAGAGTACGGCGGAGATCAGGTAAAGTACGCCCATGATCACGAGCGGCGCCTG
CCAGTTGGAAAAGCGGCTCA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDSSGVHLWLVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHLTSGSITVAVDRMEAKGLVQR
CNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGLTLAEREQAIGLLKKLGLRARAGLDQT

Sequences:

>Translated_146_residues
MDSSGVHLWLVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHLTSGSITVAVDRMEAKGLVQR
CNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGLTLAEREQAIGLLKKLGLRARAGLDQT
>Mature_146_residues
MDSSGVHLWLVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHLTSGSITVAVDRMEAKGLVQR
CNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGLTLAEREQAIGLLKKLGLRARAGLDQT

Specific function: Negatively regulates mhqA, mhqED, mhqNOP, and azoR2 which may contribute to the degradation of aromatic compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15922; Mature: 15922

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSGVHLWLVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
TSGSITVAVDRMEAKGLVQRCNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGL
CCCCEEEEEECHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
TLAEREQAIGLLKKLGLRARAGLDQT
HHHHHHHHHHHHHHHCHHHCCCCCCC
>Mature Secondary Structure
MDSSGVHLWLVLWKAYESLHAHAIRHIQSLGLGFSDFSVLEVLLHKGPTPVNTIGEMVHL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
TSGSITVAVDRMEAKGLVQRCNHPSDRRTRVVHLTEAGAKLIRCAFADHEAAMERAAAGL
CCCCEEEEEECHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
TLAEREQAIGLLKKLGLRARAGLDQT
HHHHHHHHHHHHHHHCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]