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The map label for this gene is 116623635

Identifier: 116623635

GI number: 116623635

Start: 5748383

End: 5749150

Strand: Direct

Name: 116623635

Synonym: Acid_4547

Alternate gene names: NA

Gene position: 5748383-5749150 (Clockwise)

Preceding gene: 116623623

Following gene: 116623637

Centisome position: 57.68

GC content: 65.1

Gene sequence:

>768_bases
ATGCTGACCGAATCCGATCGCCGCCAGCTTGACCAGCAGGGCTACCTCGTGATCCCCGGCCTGATGCCCCCGGAGCAGCT
CGATTGCCTGCGCCGCCGGGTGGACGAACTCTTCCTTGAGGAAGGCGCCAATGCCGGCGGCGAATTCAAGCAGGAGCCCG
GCGCGCGCCGTCTCGCCAACCTGGTCAACAAAGGGCGAGTCTTCGAGGAAGTCATCCTCACGCCGCGCGTTCTGGAGTGC
ATGGCCCACGTGCTCGGTCCGCGCTTCAAGCTGAGCTCCGTCAACGTGCGCTCCACCGATCCCTACTGCGAGGCCGACCA
GCCGCTGCACGCCGATAGCGGCGCCATCGCCGACGATTCCGGCTACACCGTCTGCAACTCCGTCTGGATGCTGGACGATT
TCACCAGCCAAAACGGCGCCACCCGTTTCGTAGCCGGCTCGCACCTCTGGCGCCGCTTGCCCGAGCCCGGGTTCTATCAC
GCCCACCCCGAGCAGCAGCTGGTGCTCGGCAAAGCCGGCGACGTGGTGGTGATGAATGCCCACATGTGGCACGGGGGCAC
CGCCAATCGTACTGCCGCCCCGCGCCGCGCCATGCACGTTTATTACACCCGCTACGACCAGCCGCAACAGCAGTGGCAGA
AGCGCTGGCTCAGTCCCGAATTGCAGGCCCGCCTCGCTCCCGAAGCGCGCGAGATCCTGGCTCTCGATGACCCTCTTAAT
GACGAGCTAAGCTCCACCGGCTCCGGCAAAAGCGGATTTATGAAGTAA

Upstream 100 bases:

>100_bases
GCGCGCCCGATGCCGTGCCCTGCCCCGGTCACCACCACCACCTGCCGCTCGAACCGCTTGTGTGTTTTCATAGGCCAGCT
TTGATGCTATAACAAGCACC

Downstream 100 bases:

>100_bases
AACCAGCCGCGACCGTTAGTTCTCCCCGCCCTCCGGCGCCATGGCCTTTTGCAATTCCTCCGCCACAACCTCCAGCGGAG
TCTCTTCCGCCAATTCCTTC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLTESDRRQLDQQGYLVIPGLMPPEQLDCLRRRVDELFLEEGANAGGEFKQEPGARRLANLVNKGRVFEEVILTPRVLEC
MAHVLGPRFKLSSVNVRSTDPYCEADQPLHADSGAIADDSGYTVCNSVWMLDDFTSQNGATRFVAGSHLWRRLPEPGFYH
AHPEQQLVLGKAGDVVVMNAHMWHGGTANRTAAPRRAMHVYYTRYDQPQQQWQKRWLSPELQARLAPEAREILALDDPLN
DELSSTGSGKSGFMK

Sequences:

>Translated_255_residues
MLTESDRRQLDQQGYLVIPGLMPPEQLDCLRRRVDELFLEEGANAGGEFKQEPGARRLANLVNKGRVFEEVILTPRVLEC
MAHVLGPRFKLSSVNVRSTDPYCEADQPLHADSGAIADDSGYTVCNSVWMLDDFTSQNGATRFVAGSHLWRRLPEPGFYH
AHPEQQLVLGKAGDVVVMNAHMWHGGTANRTAAPRRAMHVYYTRYDQPQQQWQKRWLSPELQARLAPEAREILALDDPLN
DELSSTGSGKSGFMK
>Mature_255_residues
MLTESDRRQLDQQGYLVIPGLMPPEQLDCLRRRVDELFLEEGANAGGEFKQEPGARRLANLVNKGRVFEEVILTPRVLEC
MAHVLGPRFKLSSVNVRSTDPYCEADQPLHADSGAIADDSGYTVCNSVWMLDDFTSQNGATRFVAGSHLWRRLPEPGFYH
AHPEQQLVLGKAGDVVVMNAHMWHGGTANRTAAPRRAMHVYYTRYDQPQQQWQKRWLSPELQARLAPEAREILALDDPLN
DELSSTGSGKSGFMK

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 28673; Mature: 28673

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTESDRRQLDQQGYLVIPGLMPPEQLDCLRRRVDELFLEEGANAGGEFKQEPGARRLAN
CCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LVNKGRVFEEVILTPRVLECMAHVLGPRFKLSSVNVRSTDPYCEADQPLHADSGAIADDS
HHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GYTVCNSVWMLDDFTSQNGATRFVAGSHLWRRLPEPGFYHAHPEQQLVLGKAGDVVVMNA
CCEEHHEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEE
HMWHGGTANRTAAPRRAMHVYYTRYDQPQQQWQKRWLSPELQARLAPEAREILALDDPLN
EEECCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCHHHEEECCCCCC
DELSSTGSGKSGFMK
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MLTESDRRQLDQQGYLVIPGLMPPEQLDCLRRRVDELFLEEGANAGGEFKQEPGARRLAN
CCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LVNKGRVFEEVILTPRVLECMAHVLGPRFKLSSVNVRSTDPYCEADQPLHADSGAIADDS
HHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GYTVCNSVWMLDDFTSQNGATRFVAGSHLWRRLPEPGFYHAHPEQQLVLGKAGDVVVMNA
CCEEHHEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEE
HMWHGGTANRTAAPRRAMHVYYTRYDQPQQQWQKRWLSPELQARLAPEAREILALDDPLN
EEECCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCHHHEEECCCCCC
DELSSTGSGKSGFMK
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]