| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is afsK [H]
Identifier: 116623623
GI number: 116623623
Start: 5732633
End: 5733919
Strand: Direct
Name: afsK [H]
Synonym: Acid_4533
Alternate gene names: 116623623
Gene position: 5732633-5733919 (Clockwise)
Preceding gene: 116623622
Following gene: 116623635
Centisome position: 57.52
GC content: 64.41
Gene sequence:
>1287_bases ATGCGCCTCTCCCTCACCGTACTGGCTGCGGCGGCCTGCTTCGGGCAAGCGACATTCCGCGGTGATGCGGCGCACTCCGG CGCGTTCTCCGGCGAAGGGCCGCGCGCGTTCCATGGCGTGAAGTGGAAGTTCGCGACCGGAGGCCGGGTTGTCTCTTCGG CGGTGGCAAGCAACGGCGCCATCTACTTCGGCAGCGACGATGGCAACATCTACGCGGTCGATCCCGCGAGCGGCAGGCAA CTCTGGCAATTCACTACCGGCGGACCCATCGATTCCACTCCCGCGATTGCCGGCGGCGTGGTCTATTTCGGCAGCTACGA TGCCAAGTTTTACGCCGTGGACGCCAAATCGGGCGCGCTGCGGTGGAAGTTCGCAGCTGGCAGTGAGCGGCGCTTCGAAG CCAGGGGCCTGCACGGCATGCAGCCCTTAACGCAGACCTTCCTCGATCCTTACGACGTTTTTCTGTCCAGCCCGGTGGTG GCCGAAGGCGCAGTCTACTTCGGCTCCGGCGATGGCAACCTCTACGCGCTTGACGCCGCCTCGGGCGCCCTGCGGTGGAA GTTCCATACCGGCGACGTAGTTCACGCCTCCCCCGCCTACGCCGCCGGGACCCTCTTCTTCGGCAGTTGGGACAGCCGCT TCTACGCCGTCGAGGCCACCACCGGGAAGGAGAAGTGGCGCTTCCAGGCCGGCACAGACGACCTGACCCACAACCAGATT GGCTTTCAATCTTCACCGGCCGTGGTGGATGGCGTGGTTTACACCGGCTGCCGCGATTCCAACGTCTACGCGCTCGATGC CGCCACCGGCAAGGAGAAATGGCGCGTCAACAATCAGGGCAGCTGGGTGAACAGCTCGCCCGCCGTCGCCGAGGGCAAAG TGTACTTCGCGACGGCGGACTCCAGCCTCTTCCACGCGGTGGATGCGGCCACGGGCAAGTCCGCATTCAAGCACCAGCTG AAGGGCTACGTCTTTTCCTCGCCCTCGGTCGCGGGAGACGTGGTCTACCTGGGGATTCTCAACGGCACGATGGAAGCGCG CGATCGCAAGACCGGCGAGTTACTGTGGACCTTCCAGACCGAGACGTCCAAACAGAATCGCGACTGGGTGCTGACCGCGG AGGGCAAGCTGAATCCCGCGATGTTCTTCCGTTCGAACTGGCTGGAGGGTGGAATTCTGGCCGCCAATCGCGAGTTCGCG ATCGGCTCTATTTTCAGCGCGCCGCTGATCTCGGACGGCACGGTCTACGTGGGCAGCGCCGACGGCTATCTCTACGCCCT GCAGTAG
Upstream 100 bases:
>100_bases GCATCAGCTTCGAAGGGCGGTGGCAGAAAGACGAATTGAACGGCACGTTCGCGCAGGGTCCGATCGAAAGCCCGCTGAGC TTACGGAGGGCGCGGTGAGG
Downstream 100 bases:
>100_bases CGCGGGGCCGGCTTCTTCCGCCCGCCCCGTCCGCCGCAAATTTGGCAGGCCGGAGGAGCCTGCCCAACGCAGTCCGGGGT TGTGCTGGCGTCATCCCGCG
Product: pyrrolo-quinoline quinone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRLSLTVLAAAACFGQATFRGDAAHSGAFSGEGPRAFHGVKWKFATGGRVVSSAVASNGAIYFGSDDGNIYAVDPASGRQ LWQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGALRWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPVV AEGAVYFGSGDGNLYALDAASGALRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWRFQAGTDDLTHNQI GFQSSPAVVDGVVYTGCRDSNVYALDAATGKEKWRVNNQGSWVNSSPAVAEGKVYFATADSSLFHAVDAATGKSAFKHQL KGYVFSSPSVAGDVVYLGILNGTMEARDRKTGELLWTFQTETSKQNRDWVLTAEGKLNPAMFFRSNWLEGGILAANREFA IGSIFSAPLISDGTVYVGSADGYLYALQ
Sequences:
>Translated_428_residues MRLSLTVLAAAACFGQATFRGDAAHSGAFSGEGPRAFHGVKWKFATGGRVVSSAVASNGAIYFGSDDGNIYAVDPASGRQ LWQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGALRWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPVV AEGAVYFGSGDGNLYALDAASGALRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWRFQAGTDDLTHNQI GFQSSPAVVDGVVYTGCRDSNVYALDAATGKEKWRVNNQGSWVNSSPAVAEGKVYFATADSSLFHAVDAATGKSAFKHQL KGYVFSSPSVAGDVVYLGILNGTMEARDRKTGELLWTFQTETSKQNRDWVLTAEGKLNPAMFFRSNWLEGGILAANREFA IGSIFSAPLISDGTVYVGSADGYLYALQ >Mature_428_residues MRLSLTVLAAAACFGQATFRGDAAHSGAFSGEGPRAFHGVKWKFATGGRVVSSAVASNGAIYFGSDDGNIYAVDPASGRQ LWQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGALRWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPVV AEGAVYFGSGDGNLYALDAASGALRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWRFQAGTDDLTHNQI GFQSSPAVVDGVVYTGCRDSNVYALDAATGKEKWRVNNQGSWVNSSPAVAEGKVYFATADSSLFHAVDAATGKSAFKHQL KGYVFSSPSVAGDVVYLGILNGTMEARDRKTGELLWTFQTETSKQNRDWVLTAEGKLNPAMFFRSNWLEGGILAANREFA IGSIFSAPLISDGTVYVGSADGYLYALQ
Specific function: Involved in the regulation of secondary metabolism by phosphorylating, on both Ser and Thr, the AfsR global regulatory protein involved in the control of secondary metabolism [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=401, Percent_Identity=23.1920199501247, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1788859, Length=281, Percent_Identity=21.7081850533808, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR011047 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase; PF01011 PQQ [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 45710; Mature: 45710
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSLTVLAAAACFGQATFRGDAAHSGAFSGEGPRAFHGVKWKFATGGRVVSSAVASNGA CEEEEHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCCHHHHHHHHCCCE IYFGSDDGNIYAVDPASGRQLWQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGAL EEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCE RWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPVVAEGAVYFGSGDGNLYALDAA EEEEECCCCCEEHHCCCCCCCHHHHHHCCHHHHHHCCCCEECCEEEEECCCCCEEEEECC SGALRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWRFQAGTDDLTHNQI CCEEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCC GFQSSPAVVDGVVYTGCRDSNVYALDAATGKEKWRVNNQGSWVNSSPAVAEGKVYFATAD CCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEECCEEEEEECC SSLFHAVDAATGKSAFKHQLKGYVFSSPSVAGDVVYLGILNGTMEARDRKTGELLWTFQT CCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCHHCCCCCCEEEEEEEC ETSKQNRDWVLTAEGKLNPAMFFRSNWLEGGILAANREFAIGSIFSAPLISDGTVYVGSA CCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCCEECCCEEEEECC DGYLYALQ CCEEEEEC >Mature Secondary Structure MRLSLTVLAAAACFGQATFRGDAAHSGAFSGEGPRAFHGVKWKFATGGRVVSSAVASNGA CEEEEHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCCHHHHHHHHCCCE IYFGSDDGNIYAVDPASGRQLWQFTTGGPIDSTPAIAGGVVYFGSYDAKFYAVDAKSGAL EEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCE RWKFAAGSERRFEARGLHGMQPLTQTFLDPYDVFLSSPVVAEGAVYFGSGDGNLYALDAA EEEEECCCCCEEHHCCCCCCCHHHHHHCCHHHHHHCCCCEECCEEEEECCCCCEEEEECC SGALRWKFHTGDVVHASPAYAAGTLFFGSWDSRFYAVEATTGKEKWRFQAGTDDLTHNQI CCEEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCC GFQSSPAVVDGVVYTGCRDSNVYALDAATGKEKWRVNNQGSWVNSSPAVAEGKVYFATAD CCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEECCEEEEEECC SSLFHAVDAATGKSAFKHQLKGYVFSSPSVAGDVVYLGILNGTMEARDRKTGELLWTFQT CCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCHHCCCCCCEEEEEEEC ETSKQNRDWVLTAEGKLNPAMFFRSNWLEGGILAANREFAIGSIFSAPLISDGTVYVGSA CCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCCEECCCEEEEECC DGYLYALQ CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8063104; 8635757; 12000953 [H]