| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB1 [H]
Identifier: 116623529
GI number: 116623529
Start: 5617868
End: 5620339
Strand: Direct
Name: macB1 [H]
Synonym: Acid_4439
Alternate gene names: 116623529
Gene position: 5617868-5620339 (Clockwise)
Preceding gene: 116623528
Following gene: 116623531
Centisome position: 56.37
GC content: 62.94
Gene sequence:
>2472_bases ATGCCGGCCTGGCTCGAAGAAAGATGGCGAGACCTGCGCTTCGCCGTACGGTCCCTGGCTCGAACACCTGGGTTCACCTC CATCGCGCTCCTGGTGATTGCGGCCGGTATCGGCGTAAATACCGCTGTGTTTTCGGTGGTGAATGCCGTGTTTCTCAAGC CCCTGGCCTATCCCGATCCGCGGACGCTGGTGCAACTGGTGACCACCGGGAATCGGGGGCCGATTCCGGTCGCGAACATC CCCGAGTACAGCGTCTGGAGACAGCAATCCGCTGTCTTCCGGCAGGTGGCGGCCTATGATTGGGGCGGAGCCGGCATAAA CCTCAACGGCGGAGAGCATCCGGAGCAGGTACGCGGCATGCATGTGACCAGCGAATATTTCGCGCTGTTCGGCGCCCCGT TGGCGGCGGGACGCACGTTCACGGCGGCGGAAGATCGCCCCAATGCCGGTCACTTTGTCGTGTTGAGTTACGGACTGTGG CAGAGGCGCTTCGGAGGGAACCGTGAAATCGTCGGCTCTACCATCCAGGTGGACGACCAGTCGTGGCTGGTTGTCGGCGT ATTAGGTCGCGGCTTCGCCAGCGACACCCCCACGGATCTATGGATTCCCTTTCAGTTTGATCTCACGTCGCGAGAGATGT TTCGCAACTTCAACGTGGCGGCGCGCCTGATACCGGGCGTCACCCCCGCCCAGGCAAATGCGCAGCTCGCGCTGGCCGCT GACCAGTTCCGCCGCGCCTATGGCAGCAACGCTCTGCCGCCCCAGGGCGGCTTTGGCGCAGTGCCGCTGCAGGATGCTCT GGTAGGCGATATCCGGTTCCCACTCATGATTTTGCTCGGAGCTGTGGTGTTCGTGCTTCTCATCGCCTGCGCTAATGTGG CCAACCTTCTGCTGGCGCGAGCCTCGGTCCGAAAACGCGAATTTGCAACGCGTGCCGCTCTGGGCGCCGGGCGTGGACAA ATCATTCGACAACTGCTGACCGAGAGCCTTGTGCTCTCCTCTTTCGGCGGCCTGCTGGGCCTGGCCATCGGGTTCAGCGG CGTGCGTCTGCTGTTGAGCGTCAGTAACGGCAACATTCCTCGAATCGGAGAGAATGGCTCGGCTGTGGGACTCGATTATC GGGTCTTGCTGTTCACCGTGGCCGTGTCGCTGCTGACCGGCATGCTCTTCGGATTGGCGCCCGCCCTCTCCGCCTCGCGC GCCGATCTCATCACCGCTCTCAAGGGTAGTTCCAGCCATTCCGGCACGGTCCTTCGGCATTCCAGGTTTCGCTCCCTGCT GGTGGTAAGCGAGTTTGCACTGGCTCTGGTTCTTGTCATCGGAGCCGCTCTACTCATCCGGACTTTTCTCAAGTTGGAGG ACGTCAATCCCGGTTTCACCACCGATAACGTTCTCAGCGCGTCGATGTCGATGACGGGTCGCCGCTTTCAGGCCACGGGA CCTGTGGCCCAGGTCGTTCGCGATGGCCGCGAGCGCCTGATGGCCGTCCCCGGAGTACTTGACGTGGGCGTAAGCAACTG CCTGCCGCTGCAGGGCTGTTTCGGCATGGGCTTTGACGTCTTGGGACGGGGGGCGGGAGAGACGCCGGCCAATGGCGTCG CCGGCTATTTCTCCATCTCGTGGAGCTATTTCTCGGCCTTGGAAATACCTTTGTTGCGCGGCCGCGCTTTCACCGCGATG GATGATGGCGCCGCGCCCGGAGTCGTCATCATCAACCAGGCGATGGCCCGGCGGTATTGGCCCCACGGCGACCCGATGAA AGACCGGATTCGAATCGGAGCGGGTGGTCCGGCGTTTGCCGAGCCGCCCCGCAAGATCATTGCCGTCGTGGGGGACACAC GCGATGCTGGCGTCAGTCGCGATCCTTTTCCGACGATGTACATTCCAATCGCGCAGATGCCGGACGCGCAGACTGCGCTC AATTCACGGGTTGCACCGCTCTGGTGGATCGTGCGCAGCCGCATGAATCCCTATACCTTGCGGGCTCCCATCGAAGCTGC GCTGCGTGATGCCAGCGGAGGCATGCCGGTCGCCCGTGTCCGGACTATGGCGGAGGTCGCGGCCCGCGACACAGCGCGCC AGCGTTTCAATATGCTCTTCCTCACTATCTTTGGAGCAGCCGGCCTGCTGATGGCCGCCATCGGTATTTACGGTGTCATC GCCTATTCCATCCAGCTCCGCACTCGGGAGCTCGGCGTGCGTATGGCGCTCGGGGCCGACCCTTCGAAGCTCCGCAATGC GGTTATCGGTCAGGGCATGATGCTGGCCGCCGCCGGTCTGGTCCTGGGCCTCGGTGGGTCTTTCTGGCTCACTCGCTTGC TGGCCAGCTTCCTCTTTGGTGTCACAGCCAGGGACCCGATCGCATTTGTGGTGACGCCGCTGGTTCTCGGCGCAACCGCG CTTTTCGCGGTTTGGCTTCCGGCGCAGAGAGTCACTCGCGTCGATCCGATGACTGCGCTTCGGCTCGAATAG
Upstream 100 bases:
>100_bases TTGAATTCACCGTGACTTTGAGGGACGACACACATGCCGAAATCCACCCGGCAGGAGCACCGGCAAACATGAAGCCGATA CCGGCCCGAAAGGTTCGCTA
Downstream 100 bases:
>100_bases CGGAGAGCGTTCGTAGGAAAGCCGGAGTCAACTCTGCCGTATGAAGTCCGCGCTAAGGCGCCGATAGGAATCTGAGGATC TCCTGCATCAACCGCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 823; Mature: 822
Protein sequence:
>823_residues MPAWLEERWRDLRFAVRSLARTPGFTSIALLVIAAGIGVNTAVFSVVNAVFLKPLAYPDPRTLVQLVTTGNRGPIPVANI PEYSVWRQQSAVFRQVAAYDWGGAGINLNGGEHPEQVRGMHVTSEYFALFGAPLAAGRTFTAAEDRPNAGHFVVLSYGLW QRRFGGNREIVGSTIQVDDQSWLVVGVLGRGFASDTPTDLWIPFQFDLTSREMFRNFNVAARLIPGVTPAQANAQLALAA DQFRRAYGSNALPPQGGFGAVPLQDALVGDIRFPLMILLGAVVFVLLIACANVANLLLARASVRKREFATRAALGAGRGQ IIRQLLTESLVLSSFGGLLGLAIGFSGVRLLLSVSNGNIPRIGENGSAVGLDYRVLLFTVAVSLLTGMLFGLAPALSASR ADLITALKGSSSHSGTVLRHSRFRSLLVVSEFALALVLVIGAALLIRTFLKLEDVNPGFTTDNVLSASMSMTGRRFQATG PVAQVVRDGRERLMAVPGVLDVGVSNCLPLQGCFGMGFDVLGRGAGETPANGVAGYFSISWSYFSALEIPLLRGRAFTAM DDGAAPGVVIINQAMARRYWPHGDPMKDRIRIGAGGPAFAEPPRKIIAVVGDTRDAGVSRDPFPTMYIPIAQMPDAQTAL NSRVAPLWWIVRSRMNPYTLRAPIEAALRDASGGMPVARVRTMAEVAARDTARQRFNMLFLTIFGAAGLLMAAIGIYGVI AYSIQLRTRELGVRMALGADPSKLRNAVIGQGMMLAAAGLVLGLGGSFWLTRLLASFLFGVTARDPIAFVVTPLVLGATA LFAVWLPAQRVTRVDPMTALRLE
Sequences:
>Translated_823_residues MPAWLEERWRDLRFAVRSLARTPGFTSIALLVIAAGIGVNTAVFSVVNAVFLKPLAYPDPRTLVQLVTTGNRGPIPVANI PEYSVWRQQSAVFRQVAAYDWGGAGINLNGGEHPEQVRGMHVTSEYFALFGAPLAAGRTFTAAEDRPNAGHFVVLSYGLW QRRFGGNREIVGSTIQVDDQSWLVVGVLGRGFASDTPTDLWIPFQFDLTSREMFRNFNVAARLIPGVTPAQANAQLALAA DQFRRAYGSNALPPQGGFGAVPLQDALVGDIRFPLMILLGAVVFVLLIACANVANLLLARASVRKREFATRAALGAGRGQ IIRQLLTESLVLSSFGGLLGLAIGFSGVRLLLSVSNGNIPRIGENGSAVGLDYRVLLFTVAVSLLTGMLFGLAPALSASR ADLITALKGSSSHSGTVLRHSRFRSLLVVSEFALALVLVIGAALLIRTFLKLEDVNPGFTTDNVLSASMSMTGRRFQATG PVAQVVRDGRERLMAVPGVLDVGVSNCLPLQGCFGMGFDVLGRGAGETPANGVAGYFSISWSYFSALEIPLLRGRAFTAM DDGAAPGVVIINQAMARRYWPHGDPMKDRIRIGAGGPAFAEPPRKIIAVVGDTRDAGVSRDPFPTMYIPIAQMPDAQTAL NSRVAPLWWIVRSRMNPYTLRAPIEAALRDASGGMPVARVRTMAEVAARDTARQRFNMLFLTIFGAAGLLMAAIGIYGVI AYSIQLRTRELGVRMALGADPSKLRNAVIGQGMMLAAAGLVLGLGGSFWLTRLLASFLFGVTARDPIAFVVTPLVLGATA LFAVWLPAQRVTRVDPMTALRLE >Mature_822_residues PAWLEERWRDLRFAVRSLARTPGFTSIALLVIAAGIGVNTAVFSVVNAVFLKPLAYPDPRTLVQLVTTGNRGPIPVANIP EYSVWRQQSAVFRQVAAYDWGGAGINLNGGEHPEQVRGMHVTSEYFALFGAPLAAGRTFTAAEDRPNAGHFVVLSYGLWQ RRFGGNREIVGSTIQVDDQSWLVVGVLGRGFASDTPTDLWIPFQFDLTSREMFRNFNVAARLIPGVTPAQANAQLALAAD QFRRAYGSNALPPQGGFGAVPLQDALVGDIRFPLMILLGAVVFVLLIACANVANLLLARASVRKREFATRAALGAGRGQI IRQLLTESLVLSSFGGLLGLAIGFSGVRLLLSVSNGNIPRIGENGSAVGLDYRVLLFTVAVSLLTGMLFGLAPALSASRA DLITALKGSSSHSGTVLRHSRFRSLLVVSEFALALVLVIGAALLIRTFLKLEDVNPGFTTDNVLSASMSMTGRRFQATGP VAQVVRDGRERLMAVPGVLDVGVSNCLPLQGCFGMGFDVLGRGAGETPANGVAGYFSISWSYFSALEIPLLRGRAFTAMD DGAAPGVVIINQAMARRYWPHGDPMKDRIRIGAGGPAFAEPPRKIIAVVGDTRDAGVSRDPFPTMYIPIAQMPDAQTALN SRVAPLWWIVRSRMNPYTLRAPIEAALRDASGGMPVARVRTMAEVAARDTARQRFNMLFLTIFGAAGLLMAAIGIYGVIA YSIQLRTRELGVRMALGADPSKLRNAVIGQGMMLAAAGLVLGLGGSFWLTRLLASFLFGVTARDPIAFVVTPLVLGATAL FAVWLPAQRVTRVDPMTALRLE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=295, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 88069; Mature: 87938
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWLEERWRDLRFAVRSLARTPGFTSIALLVIAAGIGVNTAVFSVVNAVFLKPLAYPDP CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH RTLVQLVTTGNRGPIPVANIPEYSVWRQQSAVFRQVAAYDWGGAGINLNGGEHPEQVRGM HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHCCC HVTSEYFALFGAPLAAGRTFTAAEDRPNAGHFVVLSYGLWQRRFGGNREIVGSTIQVDDQ EEHHHHHHHHCCHHHCCCEEECCCCCCCCCCEEEEECCHHHHHCCCCCEEECCEEEECCC SWLVVGVLGRGFASDTPTDLWIPFQFDLTSREMFRNFNVAARLIPGVTPAQANAQLALAA CEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEH DQFRRAYGSNALPPQGGFGAVPLQDALVGDIRFPLMILLGAVVFVLLIACANVANLLLAR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVRKREFATRAALGAGRGQIIRQLLTESLVLSSFGGLLGLAIGFSGVRLLLSVSNGNIP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC RIGENGSAVGLDYRVLLFTVAVSLLTGMLFGLAPALSASRADLITALKGSSSHSGTVLRH CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHH SRFRSLLVVSEFALALVLVIGAALLIRTFLKLEDVNPGFTTDNVLSASMSMTGRRFQATG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCC PVAQVVRDGRERLMAVPGVLDVGVSNCLPLQGCFGMGFDVLGRGAGETPANGVAGYFSIS HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCEEEEEEE WSYFSALEIPLLRGRAFTAMDDGAAPGVVIINQAMARRYWPHGDPMKDRIRIGAGGPAFA HHHHHHHCCHHCCCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCHHHCEEECCCCCCCC EPPRKIIAVVGDTRDAGVSRDPFPTMYIPIAQMPDAQTALNSRVAPLWWIVRSRMNPYTL CCCHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE RAPIEAALRDASGGMPVARVRTMAEVAARDTARQRFNMLFLTIFGAAGLLMAAIGIYGVI ECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSIQLRTRELGVRMALGADPSKLRNAVIGQGMMLAAAGLVLGLGGSFWLTRLLASFLFG HHHEEEEHHHHCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC VTARDPIAFVVTPLVLGATALFAVWLPAQRVTRVDPMTALRLE CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECC >Mature Secondary Structure PAWLEERWRDLRFAVRSLARTPGFTSIALLVIAAGIGVNTAVFSVVNAVFLKPLAYPDP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH RTLVQLVTTGNRGPIPVANIPEYSVWRQQSAVFRQVAAYDWGGAGINLNGGEHPEQVRGM HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHCCC HVTSEYFALFGAPLAAGRTFTAAEDRPNAGHFVVLSYGLWQRRFGGNREIVGSTIQVDDQ EEHHHHHHHHCCHHHCCCEEECCCCCCCCCCEEEEECCHHHHHCCCCCEEECCEEEECCC SWLVVGVLGRGFASDTPTDLWIPFQFDLTSREMFRNFNVAARLIPGVTPAQANAQLALAA CEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEH DQFRRAYGSNALPPQGGFGAVPLQDALVGDIRFPLMILLGAVVFVLLIACANVANLLLAR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVRKREFATRAALGAGRGQIIRQLLTESLVLSSFGGLLGLAIGFSGVRLLLSVSNGNIP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC RIGENGSAVGLDYRVLLFTVAVSLLTGMLFGLAPALSASRADLITALKGSSSHSGTVLRH CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHH SRFRSLLVVSEFALALVLVIGAALLIRTFLKLEDVNPGFTTDNVLSASMSMTGRRFQATG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCC PVAQVVRDGRERLMAVPGVLDVGVSNCLPLQGCFGMGFDVLGRGAGETPANGVAGYFSIS HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCEEEEEEE WSYFSALEIPLLRGRAFTAMDDGAAPGVVIINQAMARRYWPHGDPMKDRIRIGAGGPAFA HHHHHHHCCHHCCCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCHHHCEEECCCCCCCC EPPRKIIAVVGDTRDAGVSRDPFPTMYIPIAQMPDAQTALNSRVAPLWWIVRSRMNPYTL CCCHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE RAPIEAALRDASGGMPVARVRTMAEVAARDTARQRFNMLFLTIFGAAGLLMAAIGIYGVI ECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSIQLRTRELGVRMALGADPSKLRNAVIGQGMMLAAAGLVLGLGGSFWLTRLLASFLFG HHHEEEEHHHHCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC VTARDPIAFVVTPLVLGATALFAVWLPAQRVTRVDPMTALRLE CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA