| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623399
Identifier: 116623399
GI number: 116623399
Start: 5456483
End: 5457415
Strand: Reverse
Name: 116623399
Synonym: Acid_4308
Alternate gene names: NA
Gene position: 5457415-5456483 (Counterclockwise)
Preceding gene: 116623400
Following gene: 116623398
Centisome position: 54.76
GC content: 64.2
Gene sequence:
>933_bases GTGCAGTTTCAACCCACGGGAAAGCCGCCGGCCGGAGTTGTCTTCGACGCCGACTTCGGGAACAACATCGAGAGCGCGCT CGCACTGGCCATGCTGTATGGCTTACAAGGGAAGAATGAAACGCGCGTCATCTCCGTCAGCAGTACGAAGAGCAGTCTGA AGTCCGCGATCTTTGCGGATATCCTGGTGCGCTTTTACACCGGCGAGCCTAACGCCTTCAGCGGTGTCACTCCGATCGGG CTCTCGCTCTCCGGCGCCATGGCTGCCGACACGCCGTTGCTCGACGCAGTCACGGGCAGGACGCAGTACCCCCGCTCAAT CGTCCGCATGAACGATACCGCCGACCCGCTGGCGCTGATCCGCAACGCGCTCTCCGCGCAGGCCGATCAGAACGCGATGG TCGTGCTCGCCGGGCCTGCCACCAATCTCGCGGCACTCCTCGCGCTCCCCGGAAGCAGCGAGCTCATCGCGAAGAAAGTG CGCTGCCTGGCCATCGCGGCCGATGGAGAGTTCGCCTCTGACGCCGGGGGGCTCACTCGCCTGCTGAGCGATTGGCCCAC CGAGATCGTGATCGCCGGCGCCGTTGTGGGCAACGCGCTGCCGTTCCCCGCCGGCTCGCTTGAGAAGGACTTTGCCTGGG CGCCGGCCCATCCGGTAGTGGACGCCTACCGAGCGTATCGTCCCATGCCTTACGACGCGCCGGCCGCCGCAATGGCGGCA GCGCTGTACGCCGTTCGTCCGCAGGAAGGGTACTTCAAACTCTCCGCTCCGGGTACGACATCCCCCGGTCTGGCAGGGGG GAAACACCGTATGCTGGAGCTTGATCCGGAGCAAAAAGATCGAATCTTAAAGGTGTACGCGGAGATGGCCTCCACCCATC CGGTCGGCAGGCCGCAACGTTTTCGCCCGCCGCAGAAAAAGCAGGAAGAATAA
Upstream 100 bases:
>100_bases GCGGAAAAGGCCTGGAGTGATTCTTATGAGCATTTCTTTGCGTGACTCTGCGGCTCTGCGGCTTTGCGAGAAATGTGTTT GATTGTGATACGTTATCAAC
Downstream 100 bases:
>100_bases GACCTCAAATGATGTAACATTCTTACGAGGGGAATCGGCGAAATGGGCTGTCGGACTTGTAAGATTGCTGTCATTGCGTT CGCTTGCGGCGCGATGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Hydrolase
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MQFQPTGKPPAGVVFDADFGNNIESALALAMLYGLQGKNETRVISVSSTKSSLKSAIFADILVRFYTGEPNAFSGVTPIG LSLSGAMAADTPLLDAVTGRTQYPRSIVRMNDTADPLALIRNALSAQADQNAMVVLAGPATNLAALLALPGSSELIAKKV RCLAIAADGEFASDAGGLTRLLSDWPTEIVIAGAVVGNALPFPAGSLEKDFAWAPAHPVVDAYRAYRPMPYDAPAAAMAA ALYAVRPQEGYFKLSAPGTTSPGLAGGKHRMLELDPEQKDRILKVYAEMASTHPVGRPQRFRPPQKKQEE
Sequences:
>Translated_310_residues MQFQPTGKPPAGVVFDADFGNNIESALALAMLYGLQGKNETRVISVSSTKSSLKSAIFADILVRFYTGEPNAFSGVTPIG LSLSGAMAADTPLLDAVTGRTQYPRSIVRMNDTADPLALIRNALSAQADQNAMVVLAGPATNLAALLALPGSSELIAKKV RCLAIAADGEFASDAGGLTRLLSDWPTEIVIAGAVVGNALPFPAGSLEKDFAWAPAHPVVDAYRAYRPMPYDAPAAAMAA ALYAVRPQEGYFKLSAPGTTSPGLAGGKHRMLELDPEQKDRILKVYAEMASTHPVGRPQRFRPPQKKQEE >Mature_310_residues MQFQPTGKPPAGVVFDADFGNNIESALALAMLYGLQGKNETRVISVSSTKSSLKSAIFADILVRFYTGEPNAFSGVTPIG LSLSGAMAADTPLLDAVTGRTQYPRSIVRMNDTADPLALIRNALSAQADQNAMVVLAGPATNLAALLALPGSSELIAKKV RCLAIAADGEFASDAGGLTRLLSDWPTEIVIAGAVVGNALPFPAGSLEKDFAWAPAHPVVDAYRAYRPMPYDAPAAAMAA ALYAVRPQEGYFKLSAPGTTSPGLAGGKHRMLELDPEQKDRILKVYAEMASTHPVGRPQRFRPPQKKQEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32751; Mature: 32751
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFQPTGKPPAGVVFDADFGNNIESALALAMLYGLQGKNETRVISVSSTKSSLKSAIFAD CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ILVRFYTGEPNAFSGVTPIGLSLSGAMAADTPLLDAVTGRTQYPRSIVRMNDTADPLALI HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCHHHEECCCCCCHHHHH RNALSAQADQNAMVVLAGPATNLAALLALPGSSELIAKKVRCLAIAADGEFASDAGGLTR HHHHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHEEEEEEEECCCCCCCHHHHHH LLSDWPTEIVIAGAVVGNALPFPAGSLEKDFAWAPAHPVVDAYRAYRPMPYDAPAAAMAA HHHCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH ALYAVRPQEGYFKLSAPGTTSPGLAGGKHRMLELDPEQKDRILKVYAEMASTHPVGRPQR HHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC FRPPQKKQEE CCCCCCCCCC >Mature Secondary Structure MQFQPTGKPPAGVVFDADFGNNIESALALAMLYGLQGKNETRVISVSSTKSSLKSAIFAD CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ILVRFYTGEPNAFSGVTPIGLSLSGAMAADTPLLDAVTGRTQYPRSIVRMNDTADPLALI HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCHHHEECCCCCCHHHHH RNALSAQADQNAMVVLAGPATNLAALLALPGSSELIAKKVRCLAIAADGEFASDAGGLTR HHHHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHEEEEEEEECCCCCCCHHHHHH LLSDWPTEIVIAGAVVGNALPFPAGSLEKDFAWAPAHPVVDAYRAYRPMPYDAPAAAMAA HHHCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH ALYAVRPQEGYFKLSAPGTTSPGLAGGKHRMLELDPEQKDRILKVYAEMASTHPVGRPQR HHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC FRPPQKKQEE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA