| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623398
Identifier: 116623398
GI number: 116623398
Start: 5454167
End: 5456440
Strand: Reverse
Name: 116623398
Synonym: Acid_4307
Alternate gene names: NA
Gene position: 5456440-5454167 (Counterclockwise)
Preceding gene: 116623399
Following gene: 116623397
Centisome position: 54.75
GC content: 62.84
Gene sequence:
>2274_bases ATGGGCTGTCGGACTTGTAAGATTGCTGTCATTGCGTTCGCTTGCGGCGCGATGCAGGCTGCCGACGTTCCCAGTTTCGA GAAGACCGTCGCGCCGATGCTCACCCGCACCTGCGCTCCCTGCCACAACGAGAATTTCTCATCCGGCGGCGTCGATATCG CGGTCTTCACGCAGGCCGCGTCACTGACCAAGAGCCGCGAAGGCTGGGACATCATCCTGCGCAAGATCCGCGCCGGCGAA ATGCCGCCCAAGGGCGTGCCGCGTCCCGCGGAAATGGACGCTGCGATTCAATTTCTCACCGGCGAATTCGAGAAGGCCGA TCGCGGCGTAAAGCCCGACCCCGGCCGCGTCACCGCGCGCCGCCTCAACCGCAGCGAGTACTCGAACACGATCCGCGACC TGCTCGCGGTGGAGTTCCACGCCGAGCAGAGCTTCCCCACGGATGATCTCGGCAACGGTTTCGATAACATCGGCGATGTC CTGACCGTCTCGCCCGTGCTCATGGAGCGCTATATGAGCGCCGCCGCGCGGGTCGCCTCGCGGGCCGTTGGCGCCGACCC GCTGCCCAAGCCGCTCGAAGCGCAGTACGCCAACAAGGACAAGAAAATCCGGCGCGTCGATTTCAGCACCATCGAAGTCC ACGCGCGCGTCGAGTTCGATGGCGAATACATCGTTCGTTTTGGCCTGCCCGGGGAGCGCGCCGCGGATGCCAAGCCGGTA ACGCTCGCGCTCTGGATGGATGGCAAGCTGCTGAACTCGATGCCGGTGGAGACCAAGCCCTCCAAGCTGGTTTACTTCGA TCCCTATTCCGAAGAGCAGATGCGCCTCTTCCTGCCCGAGGGCAATCACGTCTTCCGCGCGGCGTTTCTGGATGACGAGT TCGTTAAGACAGTCGCTCCGGCCGACGCGTATAACCGAAAGAAGAATAAGTTCATCGATTCGATGGTGTTCGTCGGCCCC TACGCCTCTAGTGCGGAGCGGCCCAGCCGCAAGAAGATTTTCATCTGCGACCCCAAGAGCGGTCCGGTCTGCGTGGAGAA GATCGTCGCCAGCCTCGCCCACCGCGCCTATCGCCGCCCGGTGACCAAGGCGGAGACCGCGTCGCTGATGAAATTCGTCG GCATCGCCAAGGCCAACGGCCAATCCACGGAGCAGGGAATTCAACTCGCGCTCCAGGCCATATTGGTGTCGCCGAACTTC CTCTTCCGCATCGAGCACGATCCGCGCCCAACGGACTCCGCCGGCGCCCACCCGGTCAGCCAGCTCGAACTGGCTTCGCG GCTCAGCTATTTCCTGTGGAGCAGCATGCCGGACGATGAACTGCTGGCGCTGGCCGAAGCCGGGAAGCTGCGCGAACCCG GCGCAATGGACGCGCAAGTGAAGCGCATGCTCACCGATGAACGCTCCTCCGCCATCGCGGATAACTTTGCGGGACAGTGG CTCGAGCTGCGCAATCTCGACGTGGTCAAGCCCGACCCGCAGAAGTTCCCCGACTGGAGTCCCGAACTGCGCGACGCCAT GAAAATGGAATCGCGCCTGTTCTTCGACCACATCCTGCGCGAGAACCGTCCGCTTTCCGAGTTCCTGGATGCGCGGTACA GCTACCTCAATGAGCGCCTCGCCAAACACTACGGCATCGCCGGCGTGAAGGGCCCCGAGTTTCGCCGCGTCGAGCTGGAT ACCGATCAGCGCGGCGGGATTCTCAGCCACGCCAGCGTGCTCACGGTCTCCAGTTACCCCACGCGCACCAGCGTGGTGCT GCGCGGCCAGTATATCCTGAACAACATTCTCGGCAGCCCCGCACCTCCGCCGCCGCCCGACGTTCCCAAGCTCGACGAAA AATCGGTGGGCACGTCCGCTTCTTTGCGCCAGCAGATGGAGGCGCATCGCGCCGACGCCATGTGCGCCTCCTGCCATAAC AAAATGGACCCGCTGGGTTTCGGCCTGGAGAACTACGACGGCATCGGCAAGTGGCGGACGCTGGATGGGAAATTTCCCGT GGACGCCTCGGGCGTGATGCCCAATGGCAAGAGTTTTACCACCCCGGCGGAAATGCGGACCGTGCTCAAGAGCCAGCTCC CGCAGTTCTCCCGTTGCATGGTGCAAAAGATGTTGACATACTCTTTAGGCAGAGGGTTGGCGCCCTACGACTCGCGGGTC GTGGACGAGATCGATGCCAAACTGGCCGCTTCGGCCTACGGGTTCCAAACGCTGATTTACCAGATTGTGCGCAGTCTGCC GTTCCAATCGCGCAGAGGGGAGCAGTTACCATGA
Upstream 100 bases:
>100_bases CCATCCGGTCGGCAGGCCGCAACGTTTTCGCCCGCCGCAGAAAAAGCAGGAAGAATAAGACCTCAAATGATGTAACATTC TTACGAGGGGAATCGGCGAA
Downstream 100 bases:
>100_bases CCTTCAAATCGATTCCGCGCCGCGCCTTCCTGCGCGGCATGGGCACCGCCGTCGCGCTGCCGTTCCTGGATGCCATGGTG CCTGCGTTCGCTCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MGCRTCKIAVIAFACGAMQAADVPSFEKTVAPMLTRTCAPCHNENFSSGGVDIAVFTQAASLTKSREGWDIILRKIRAGE MPPKGVPRPAEMDAAIQFLTGEFEKADRGVKPDPGRVTARRLNRSEYSNTIRDLLAVEFHAEQSFPTDDLGNGFDNIGDV LTVSPVLMERYMSAAARVASRAVGADPLPKPLEAQYANKDKKIRRVDFSTIEVHARVEFDGEYIVRFGLPGERAADAKPV TLALWMDGKLLNSMPVETKPSKLVYFDPYSEEQMRLFLPEGNHVFRAAFLDDEFVKTVAPADAYNRKKNKFIDSMVFVGP YASSAERPSRKKIFICDPKSGPVCVEKIVASLAHRAYRRPVTKAETASLMKFVGIAKANGQSTEQGIQLALQAILVSPNF LFRIEHDPRPTDSAGAHPVSQLELASRLSYFLWSSMPDDELLALAEAGKLREPGAMDAQVKRMLTDERSSAIADNFAGQW LELRNLDVVKPDPQKFPDWSPELRDAMKMESRLFFDHILRENRPLSEFLDARYSYLNERLAKHYGIAGVKGPEFRRVELD TDQRGGILSHASVLTVSSYPTRTSVVLRGQYILNNILGSPAPPPPPDVPKLDEKSVGTSASLRQQMEAHRADAMCASCHN KMDPLGFGLENYDGIGKWRTLDGKFPVDASGVMPNGKSFTTPAEMRTVLKSQLPQFSRCMVQKMLTYSLGRGLAPYDSRV VDEIDAKLAASAYGFQTLIYQIVRSLPFQSRRGEQLP
Sequences:
>Translated_757_residues MGCRTCKIAVIAFACGAMQAADVPSFEKTVAPMLTRTCAPCHNENFSSGGVDIAVFTQAASLTKSREGWDIILRKIRAGE MPPKGVPRPAEMDAAIQFLTGEFEKADRGVKPDPGRVTARRLNRSEYSNTIRDLLAVEFHAEQSFPTDDLGNGFDNIGDV LTVSPVLMERYMSAAARVASRAVGADPLPKPLEAQYANKDKKIRRVDFSTIEVHARVEFDGEYIVRFGLPGERAADAKPV TLALWMDGKLLNSMPVETKPSKLVYFDPYSEEQMRLFLPEGNHVFRAAFLDDEFVKTVAPADAYNRKKNKFIDSMVFVGP YASSAERPSRKKIFICDPKSGPVCVEKIVASLAHRAYRRPVTKAETASLMKFVGIAKANGQSTEQGIQLALQAILVSPNF LFRIEHDPRPTDSAGAHPVSQLELASRLSYFLWSSMPDDELLALAEAGKLREPGAMDAQVKRMLTDERSSAIADNFAGQW LELRNLDVVKPDPQKFPDWSPELRDAMKMESRLFFDHILRENRPLSEFLDARYSYLNERLAKHYGIAGVKGPEFRRVELD TDQRGGILSHASVLTVSSYPTRTSVVLRGQYILNNILGSPAPPPPPDVPKLDEKSVGTSASLRQQMEAHRADAMCASCHN KMDPLGFGLENYDGIGKWRTLDGKFPVDASGVMPNGKSFTTPAEMRTVLKSQLPQFSRCMVQKMLTYSLGRGLAPYDSRV VDEIDAKLAASAYGFQTLIYQIVRSLPFQSRRGEQLP >Mature_756_residues GCRTCKIAVIAFACGAMQAADVPSFEKTVAPMLTRTCAPCHNENFSSGGVDIAVFTQAASLTKSREGWDIILRKIRAGEM PPKGVPRPAEMDAAIQFLTGEFEKADRGVKPDPGRVTARRLNRSEYSNTIRDLLAVEFHAEQSFPTDDLGNGFDNIGDVL TVSPVLMERYMSAAARVASRAVGADPLPKPLEAQYANKDKKIRRVDFSTIEVHARVEFDGEYIVRFGLPGERAADAKPVT LALWMDGKLLNSMPVETKPSKLVYFDPYSEEQMRLFLPEGNHVFRAAFLDDEFVKTVAPADAYNRKKNKFIDSMVFVGPY ASSAERPSRKKIFICDPKSGPVCVEKIVASLAHRAYRRPVTKAETASLMKFVGIAKANGQSTEQGIQLALQAILVSPNFL FRIEHDPRPTDSAGAHPVSQLELASRLSYFLWSSMPDDELLALAEAGKLREPGAMDAQVKRMLTDERSSAIADNFAGQWL ELRNLDVVKPDPQKFPDWSPELRDAMKMESRLFFDHILRENRPLSEFLDARYSYLNERLAKHYGIAGVKGPEFRRVELDT DQRGGILSHASVLTVSSYPTRTSVVLRGQYILNNILGSPAPPPPPDVPKLDEKSVGTSASLRQQMEAHRADAMCASCHNK MDPLGFGLENYDGIGKWRTLDGKFPVDASGVMPNGKSFTTPAEMRTVLKSQLPQFSRCMVQKMLTYSLGRGLAPYDSRVV DEIDAKLAASAYGFQTLIYQIVRSLPFQSRRGEQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83943; Mature: 83812
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCRTCKIAVIAFACGAMQAADVPSFEKTVAPMLTRTCAPCHNENFSSGGVDIAVFTQAA CCCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHH SLTKSREGWDIILRKIRAGEMPPKGVPRPAEMDAAIQFLTGEFEKADRGVKPDPGRVTAR HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHH RLNRSEYSNTIRDLLAVEFHAEQSFPTDDLGNGFDNIGDVLTVSPVLMERYMSAAARVAS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVGADPLPKPLEAQYANKDKKIRRVDFSTIEVHARVEFDGEYIVRFGLPGERAADAKPV HHCCCCCCCCCCHHHHCCCCCCEEEECCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCE TLALWMDGKLLNSMPVETKPSKLVYFDPYSEEQMRLFLPEGNHVFRAAFLDDEFVKTVAP EEEEEECCHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCC ADAYNRKKNKFIDSMVFVGPYASSAERPSRKKIFICDPKSGPVCVEKIVASLAHRAYRRP CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC VTKAETASLMKFVGIAKANGQSTEQGIQLALQAILVSPNFLFRIEHDPRPTDSAGAHPVS CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHH QLELASRLSYFLWSSMPDDELLALAEAGKLREPGAMDAQVKRMLTDERSSAIADNFAGQW HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LELRNLDVVKPDPQKFPDWSPELRDAMKMESRLFFDHILRENRPLSEFLDARYSYLNERL EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKHYGIAGVKGPEFRRVELDTDQRGGILSHASVLTVSSYPTRTSVVLRGQYILNNILGSP HHHCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCEEEEEEHHHHHHHHCCCC APPPPPDVPKLDEKSVGTSASLRQQMEAHRADAMCASCHNKMDPLGFGLENYDGIGKWRT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE LDGKFPVDASGVMPNGKSFTTPAEMRTVLKSQLPQFSRCMVQKMLTYSLGRGLAPYDSRV ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH VDEIDAKLAASAYGFQTLIYQIVRSLPFQSRRGEQLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GCRTCKIAVIAFACGAMQAADVPSFEKTVAPMLTRTCAPCHNENFSSGGVDIAVFTQAA CCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHH SLTKSREGWDIILRKIRAGEMPPKGVPRPAEMDAAIQFLTGEFEKADRGVKPDPGRVTAR HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHH RLNRSEYSNTIRDLLAVEFHAEQSFPTDDLGNGFDNIGDVLTVSPVLMERYMSAAARVAS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVGADPLPKPLEAQYANKDKKIRRVDFSTIEVHARVEFDGEYIVRFGLPGERAADAKPV HHCCCCCCCCCCHHHHCCCCCCEEEECCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCE TLALWMDGKLLNSMPVETKPSKLVYFDPYSEEQMRLFLPEGNHVFRAAFLDDEFVKTVAP EEEEEECCHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCC ADAYNRKKNKFIDSMVFVGPYASSAERPSRKKIFICDPKSGPVCVEKIVASLAHRAYRRP CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC VTKAETASLMKFVGIAKANGQSTEQGIQLALQAILVSPNFLFRIEHDPRPTDSAGAHPVS CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHH QLELASRLSYFLWSSMPDDELLALAEAGKLREPGAMDAQVKRMLTDERSSAIADNFAGQW HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LELRNLDVVKPDPQKFPDWSPELRDAMKMESRLFFDHILRENRPLSEFLDARYSYLNERL EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKHYGIAGVKGPEFRRVELDTDQRGGILSHASVLTVSSYPTRTSVVLRGQYILNNILGSP HHHCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCEEEEEEHHHHHHHHCCCC APPPPPDVPKLDEKSVGTSASLRQQMEAHRADAMCASCHNKMDPLGFGLENYDGIGKWRT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE LDGKFPVDASGVMPNGKSFTTPAEMRTVLKSQLPQFSRCMVQKMLTYSLGRGLAPYDSRV ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH VDEIDAKLAASAYGFQTLIYQIVRSLPFQSRRGEQLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA