| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623368
Identifier: 116623368
GI number: 116623368
Start: 5417958
End: 5418626
Strand: Direct
Name: 116623368
Synonym: Acid_4277
Alternate gene names: NA
Gene position: 5417958-5418626 (Clockwise)
Preceding gene: 116623366
Following gene: 116623372
Centisome position: 54.37
GC content: 63.68
Gene sequence:
>669_bases ATGGCAATCATGCGATCGGCGGCGTGGCTGGTCTTCGCGACCCTCCTTCACGGGCATCTTTACGCACAGGAAGCGCCAGG CGCCTGGCACTCCATGTTCGACGGCAAAACTCTCGGGTCCTGGCGCGAAACGGCGTTCACCGGCCACGGCAAAGCGCGGA TCGAAAACGAAGCCATCTTGCTCGGCCCGGGCGCGCCGATGACGGGAGTGACGTGGACCGGCGAGTTCCCGAAATCCGGC TATGAGGTTCGGTTCGAAGCCGCGCGGATCGACGGCAACGATTTCTTCGCGAGCCTGACATTCCCGGTCGGCGATTCCTT CTGCACGTGGGTCTTGGGCGGATGGGGCGGCGACATCGTCGGGCTCTCCAGCATCGATGGCTGGGACGCGTCGGACAACG AGACGCGCACTTACGTGGATTTCGAGAAGGGGCACTGGTACCGGTTCCGCGTCAAGGTAACGGCGGAGCGGATCACGGGC TGGGTTGACGACCGGCAGATAGTGGATGTCGCGATCGCCGGACGCAAGGTGGGGCTTCGCTACGGCGAGATCAAACTCTC GGCGCCGTTCGGCTTCGCATCGTACGGAACGGCGGGCGGCGTAAGAAAGATCGAATATCGCGCGGACCCTTCAATCCCGG TCAAGTTCGTACCGGCGCCCGTCCGCTAA
Upstream 100 bases:
>100_bases TTCGCGCGGCGTACGGCCCAGGGCATAATCACGGTTCGGCGCAGACATCGGCTTCAAATTTTATCAACAGCGGGGCGTCG CGTGCTATTCTCCGGGCTGG
Downstream 100 bases:
>100_bases ACACGGTATGCACATTTTGGCGGTCAGACCGGCGCCCGAGCGTATTTCATGTGGCGTAATCTTGCGGCAGACTTTACAAA ATCGAAGCGTGCTCGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide And Transmembrane Prediction
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAIMRSAAWLVFATLLHGHLYAQEAPGAWHSMFDGKTLGSWRETAFTGHGKARIENEAILLGPGAPMTGVTWTGEFPKSG YEVRFEAARIDGNDFFASLTFPVGDSFCTWVLGGWGGDIVGLSSIDGWDASDNETRTYVDFEKGHWYRFRVKVTAERITG WVDDRQIVDVAIAGRKVGLRYGEIKLSAPFGFASYGTAGGVRKIEYRADPSIPVKFVPAPVR
Sequences:
>Translated_222_residues MAIMRSAAWLVFATLLHGHLYAQEAPGAWHSMFDGKTLGSWRETAFTGHGKARIENEAILLGPGAPMTGVTWTGEFPKSG YEVRFEAARIDGNDFFASLTFPVGDSFCTWVLGGWGGDIVGLSSIDGWDASDNETRTYVDFEKGHWYRFRVKVTAERITG WVDDRQIVDVAIAGRKVGLRYGEIKLSAPFGFASYGTAGGVRKIEYRADPSIPVKFVPAPVR >Mature_221_residues AIMRSAAWLVFATLLHGHLYAQEAPGAWHSMFDGKTLGSWRETAFTGHGKARIENEAILLGPGAPMTGVTWTGEFPKSGY EVRFEAARIDGNDFFASLTFPVGDSFCTWVLGGWGGDIVGLSSIDGWDASDNETRTYVDFEKGHWYRFRVKVTAERITGW VDDRQIVDVAIAGRKVGLRYGEIKLSAPFGFASYGTAGGVRKIEYRADPSIPVKFVPAPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24416; Mature: 24285
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIMRSAAWLVFATLLHGHLYAQEAPGAWHSMFDGKTLGSWRETAFTGHGKARIENEAIL CCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCCCCCHHHEECCCCCEEECCCEEE LGPGAPMTGVTWTGEFPKSGYEVRFEAARIDGNDFFASLTFPVGDSFCTWVLGGWGGDIV EECCCCCCCEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEE GLSSIDGWDASDNETRTYVDFEKGHWYRFRVKVTAERITGWVDDRQIVDVAIAGRKVGLR EECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHCCCCCCCEEEEEEECCEEECEE YGEIKLSAPFGFASYGTAGGVRKIEYRADPSIPVKFVPAPVR EEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCC >Mature Secondary Structure AIMRSAAWLVFATLLHGHLYAQEAPGAWHSMFDGKTLGSWRETAFTGHGKARIENEAIL CCHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCCCCCHHHEECCCCCEEECCCEEE LGPGAPMTGVTWTGEFPKSGYEVRFEAARIDGNDFFASLTFPVGDSFCTWVLGGWGGDIV EECCCCCCCEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEE GLSSIDGWDASDNETRTYVDFEKGHWYRFRVKVTAERITGWVDDRQIVDVAIAGRKVGLR EECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHCCCCCCCEEEEEEECCEEECEE YGEIKLSAPFGFASYGTAGGVRKIEYRADPSIPVKFVPAPVR EEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA