| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623366
Identifier: 116623366
GI number: 116623366
Start: 5415826
End: 5417082
Strand: Direct
Name: 116623366
Synonym: Acid_4275
Alternate gene names: NA
Gene position: 5415826-5417082 (Clockwise)
Preceding gene: 116623358
Following gene: 116623368
Centisome position: 54.34
GC content: 63.64
Gene sequence:
>1257_bases ATGCGGAAATCCATTGGCCTGCTGCTGACCCTCTGCTGGTGCGCGTCGGCGCAAAAGACGGAGGCGATCACGGACGAGGC GAAAGTTCCTGCCTACACCCTGCCCGCGGTACTGGCTCTAAAGAGCGGTCAACCCGTCACCGACGCGAAGAGCTGGACGA CCAAACGGCGGCCCGAAATTCTGGCGATCTACGAGGCGGAAGTCTACGGCAAGAGCCCGGCCAGGCCGCCCAAGCTCAAC TACGAGGTCAAATCGGTCGAGAAGCAGGCGCTGGGTGGAAAAGCGACCCGCAAGATCGTCACCATTTTCTTCAGCGACAA GCCGGATGCGCCGAAGATGGACCTGTTGCTCTACCTCCCCGCGGCCGCCGCCAAACCGGCGCCCGTGATCCTGGGACTGA GTTTCGGCGGCATCCACACAGTGGCCAATGACCCCGGAGTTCCGCTGGCCGAGCAGTGGACGCGCGACAACAGGAAGCAG CCTTCGGCGGAGAAATCGCGCGGCGGCGAAGCGTCGCGGTGGCAAGTTGAGAAGATCCTGGCGGCGGGCTACGGACTGGC GACGGTCTACTACGAGCAGATCGAGCCGGATTTCGCGGGCGGCATGAAGTACGGCATCCGGCCGCTGTTCTTCAAACCGG GGCAGACCGAACCGGAGCCGGGCGATTGGGGAGCGGTCGCGGCCTGGGCCTGGGGCGCAAGCCGCGCGATGGATTATCTG GAGAAGGATAAGGACGTGGACGCCAGGCGGGTGGGCCTGATCGGACACTCGCGGCTCGGCAAAGCGGCAATCTGGGCGGG GGCGCAGGATGCGCGATTCACCTTCATCATCTCTAATGAGAGCGGTGAAGGCGGCGCCGCGATCAGCCGCCGCGACTACG GCGAGCGCACCACCGCGCTGAATACACGCTTCCCCCACTGGTTCGACGGCAATTACAAGAAGTACAACGACCGCGAGAAT GAAATGCCGTTCGATTCCCACATGGCGCTGGCATTGATGGCGCCCCGCGGGCTCTACGTCGCCAGCGCGGAAGGCGACCA ATGGAGCGATCCGAAGGGTGAGTTCCTGGGCGCTGCAAACGCGTCGCCGGTGTGGGAACTGTTCGGCAAAAAGGGTATCG GCACGATGACGATGCCAGACCTTCACGAGCCGGTGGGCGATAGCGTGCGCTATCACATCCGCGCCGGCAAACACGATGTC ACCGAGTACGACTGGGAGCAGTACCTGAAGTTCGCAAAAGCCCAATGGGGCCGCTGA
Upstream 100 bases:
>100_bases AGGTCGCCTTATTGTCAATCCCCGTTACGACAGCGGGCGCACCACTCCTTTCACACACCGTGCGCCCGCATTCTTCTTTG CATCGCATTACAATCAGTCC
Downstream 100 bases:
>100_bases CGGCTTACGCCGGAGTACGGCACCAGGCGGCAACCAGGGCCAGCGACATCATGGCATAGCCCAGGGATTCGCGTTCCGCG CTGAGGCGCGCGGCGAGTGT
Product: putative acetyl xylan esterase
Products: NA
Alternate protein names: GDSL Family Lipase; Glycoside Hydrolase Family Protein; Xylanase / Methyl-Glucuronoyl Esterase; Acetyl Xylan Esterase Homolog; Cellulose 1 4-Beta-Cellobiosidase; Acetyl Xylan Esterase Domain-Containing Protein; Carbohydrate Esterase Family
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRKSIGLLLTLCWCASAQKTEAITDEAKVPAYTLPAVLALKSGQPVTDAKSWTTKRRPEILAIYEAEVYGKSPARPPKLN YEVKSVEKQALGGKATRKIVTIFFSDKPDAPKMDLLLYLPAAAAKPAPVILGLSFGGIHTVANDPGVPLAEQWTRDNRKQ PSAEKSRGGEASRWQVEKILAAGYGLATVYYEQIEPDFAGGMKYGIRPLFFKPGQTEPEPGDWGAVAAWAWGASRAMDYL EKDKDVDARRVGLIGHSRLGKAAIWAGAQDARFTFIISNESGEGGAAISRRDYGERTTALNTRFPHWFDGNYKKYNDREN EMPFDSHMALALMAPRGLYVASAEGDQWSDPKGEFLGAANASPVWELFGKKGIGTMTMPDLHEPVGDSVRYHIRAGKHDV TEYDWEQYLKFAKAQWGR
Sequences:
>Translated_418_residues MRKSIGLLLTLCWCASAQKTEAITDEAKVPAYTLPAVLALKSGQPVTDAKSWTTKRRPEILAIYEAEVYGKSPARPPKLN YEVKSVEKQALGGKATRKIVTIFFSDKPDAPKMDLLLYLPAAAAKPAPVILGLSFGGIHTVANDPGVPLAEQWTRDNRKQ PSAEKSRGGEASRWQVEKILAAGYGLATVYYEQIEPDFAGGMKYGIRPLFFKPGQTEPEPGDWGAVAAWAWGASRAMDYL EKDKDVDARRVGLIGHSRLGKAAIWAGAQDARFTFIISNESGEGGAAISRRDYGERTTALNTRFPHWFDGNYKKYNDREN EMPFDSHMALALMAPRGLYVASAEGDQWSDPKGEFLGAANASPVWELFGKKGIGTMTMPDLHEPVGDSVRYHIRAGKHDV TEYDWEQYLKFAKAQWGR >Mature_418_residues MRKSIGLLLTLCWCASAQKTEAITDEAKVPAYTLPAVLALKSGQPVTDAKSWTTKRRPEILAIYEAEVYGKSPARPPKLN YEVKSVEKQALGGKATRKIVTIFFSDKPDAPKMDLLLYLPAAAAKPAPVILGLSFGGIHTVANDPGVPLAEQWTRDNRKQ PSAEKSRGGEASRWQVEKILAAGYGLATVYYEQIEPDFAGGMKYGIRPLFFKPGQTEPEPGDWGAVAAWAWGASRAMDYL EKDKDVDARRVGLIGHSRLGKAAIWAGAQDARFTFIISNESGEGGAAISRRDYGERTTALNTRFPHWFDGNYKKYNDREN EMPFDSHMALALMAPRGLYVASAEGDQWSDPKGEFLGAANASPVWELFGKKGIGTMTMPDLHEPVGDSVRYHIRAGKHDV TEYDWEQYLKFAKAQWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46148; Mature: 46148
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSIGLLLTLCWCASAQKTEAITDEAKVPAYTLPAVLALKSGQPVTDAKSWTTKRRPEI CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECCHHEEECCCCCCCCCHHCCCCCCCCE LAIYEAEVYGKSPARPPKLNYEVKSVEKQALGGKATRKIVTIFFSDKPDAPKMDLLLYLP EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEC AAAAKPAPVILGLSFGGIHTVANDPGVPLAEQWTRDNRKQPSAEKSRGGEASRWQVEKIL CCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHH AAGYGLATVYYEQIEPDFAGGMKYGIRPLFFKPGQTEPEPGDWGAVAAWAWGASRAMDYL HCCCCHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCEEHHHHCHHHHHHHH EKDKDVDARRVGLIGHSRLGKAAIWAGAQDARFTFIISNESGEGGAAISRRDYGERTTAL HCCCCCCHHHEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCCHHCEE NTRFPHWFDGNYKKYNDRENEMPFDSHMALALMAPRGLYVASAEGDQWSDPKGEFLGAAN CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEECCC ASPVWELFGKKGIGTMTMPDLHEPVGDSVRYHIRAGKHDVTEYDWEQYLKFAKAQWGR CCHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRKSIGLLLTLCWCASAQKTEAITDEAKVPAYTLPAVLALKSGQPVTDAKSWTTKRRPEI CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECCHHEEECCCCCCCCCHHCCCCCCCCE LAIYEAEVYGKSPARPPKLNYEVKSVEKQALGGKATRKIVTIFFSDKPDAPKMDLLLYLP EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEC AAAAKPAPVILGLSFGGIHTVANDPGVPLAEQWTRDNRKQPSAEKSRGGEASRWQVEKIL CCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHH AAGYGLATVYYEQIEPDFAGGMKYGIRPLFFKPGQTEPEPGDWGAVAAWAWGASRAMDYL HCCCCHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCEEHHHHCHHHHHHHH EKDKDVDARRVGLIGHSRLGKAAIWAGAQDARFTFIISNESGEGGAAISRRDYGERTTAL HCCCCCCHHHEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCCHHCEE NTRFPHWFDGNYKKYNDRENEMPFDSHMALALMAPRGLYVASAEGDQWSDPKGEFLGAAN CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEECCC ASPVWELFGKKGIGTMTMPDLHEPVGDSVRYHIRAGKHDVTEYDWEQYLKFAKAQWGR CCHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA