| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623304
Identifier: 116623304
GI number: 116623304
Start: 5337317
End: 5337964
Strand: Direct
Name: 116623304
Synonym: Acid_4211
Alternate gene names: NA
Gene position: 5337317-5337964 (Clockwise)
Preceding gene: 116623302
Following gene: 116623305
Centisome position: 53.56
GC content: 62.5
Gene sequence:
>648_bases ATGGTGCGTTATCTAGTTCTTCTGGCCGCCGCGGTCGCGGCCTACGCCCAGGGCAGTTCTCCTAAACCCTCCGCCGACGA TTACCCCGTACAGGCCAAAAGCGGCGCCACCCGAATCGGCGCCGACTTCATGGTGCACAGCTTCGCTAGCGGCGAGGAGA TGTTTATCGCCGAGAAGTACCTGGTGGTGGAAGTAGCCTTCTACCCGCCCAAAGGCGGCAGCGTAGACGTTGCCACCAGC AATTTCACCCTGACCGTCAACGGCAAGAAAGCGCTGGCCACGCAGAACCCCGCGATGGTCGCGTCCTCGCTCAAGCATCG CGATTGGCAGTTTCCGCATGGACCCATGGGCAATCTCGGGGTGGGCGGTGTCAATGTCGGCGGCGGCCAACCGCGAACCC AGTCGCCCTTCCCCGGCGCGCCCGATCCGAACCGGCTTCCCAATCCGCCGCGCGCTCCGGATGGCGATTCGAACACCCCA ACCCGCGAGACCCCCAAGGCGGAGGAAGTGCTGGTCAAGACTGCGCTGCCCGAGGGTAAGTTTACCGAACCCGTGAGCGG CTTCATCTTTTTCCCTTGGACCGGCAAGGTCAGCGCGATCAAGTCGCTCGAGTTGACCTATAACGACGTGGTGATTAAAC TCCGCTAG
Upstream 100 bases:
>100_bases GTCGCGTCATCGCTTTCTTTCGCTCCTGACGCAACAGCATAACACGCCATTGTTTAGCGGTAAAGTAAAGTTACGCAAAT GCTTGCCGGTACAATGAAGT
Downstream 100 bases:
>100_bases CTCCTCCCGTTTGCTTCCGGGATCGCGGTGGCGTAGGCTGTTGCATTATGGCCTTCTGCACAAGCTGCGGCGCCACCGTT CAGGGCGCCTTTTGTCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVRYLVLLAAAVAAYAQGSSPKPSADDYPVQAKSGATRIGADFMVHSFASGEEMFIAEKYLVVEVAFYPPKGGSVDVATS NFTLTVNGKKALATQNPAMVASSLKHRDWQFPHGPMGNLGVGGVNVGGGQPRTQSPFPGAPDPNRLPNPPRAPDGDSNTP TRETPKAEEVLVKTALPEGKFTEPVSGFIFFPWTGKVSAIKSLELTYNDVVIKLR
Sequences:
>Translated_215_residues MVRYLVLLAAAVAAYAQGSSPKPSADDYPVQAKSGATRIGADFMVHSFASGEEMFIAEKYLVVEVAFYPPKGGSVDVATS NFTLTVNGKKALATQNPAMVASSLKHRDWQFPHGPMGNLGVGGVNVGGGQPRTQSPFPGAPDPNRLPNPPRAPDGDSNTP TRETPKAEEVLVKTALPEGKFTEPVSGFIFFPWTGKVSAIKSLELTYNDVVIKLR >Mature_215_residues MVRYLVLLAAAVAAYAQGSSPKPSADDYPVQAKSGATRIGADFMVHSFASGEEMFIAEKYLVVEVAFYPPKGGSVDVATS NFTLTVNGKKALATQNPAMVASSLKHRDWQFPHGPMGNLGVGGVNVGGGQPRTQSPFPGAPDPNRLPNPPRAPDGDSNTP TRETPKAEEVLVKTALPEGKFTEPVSGFIFFPWTGKVSAIKSLELTYNDVVIKLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22859; Mature: 22859
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRYLVLLAAAVAAYAQGSSPKPSADDYPVQAKSGATRIGADFMVHSFASGEEMFIAEKY CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHEEECCCCCCEEEEEEEE LVVEVAFYPPKGGSVDVATSNFTLTVNGKKALATQNPAMVASSLKHRDWQFPHGPMGNLG EEEEEEEECCCCCEEEEEECCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC VGGVNVGGGQPRTQSPFPGAPDPNRLPNPPRAPDGDSNTPTRETPKAEEVLVKTALPEGK CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCC FTEPVSGFIFFPWTGKVSAIKSLELTYNDVVIKLR CCCCCCCEEEECCCCCEEEEEEEEEEEEEEEEEEC >Mature Secondary Structure MVRYLVLLAAAVAAYAQGSSPKPSADDYPVQAKSGATRIGADFMVHSFASGEEMFIAEKY CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHEEECCCCCCEEEEEEEE LVVEVAFYPPKGGSVDVATSNFTLTVNGKKALATQNPAMVASSLKHRDWQFPHGPMGNLG EEEEEEEECCCCCEEEEEECCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC VGGVNVGGGQPRTQSPFPGAPDPNRLPNPPRAPDGDSNTPTRETPKAEEVLVKTALPEGK CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCC FTEPVSGFIFFPWTGKVSAIKSLELTYNDVVIKLR CCCCCCCEEEECCCCCEEEEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA