| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623305
Identifier: 116623305
GI number: 116623305
Start: 5338012
End: 5338791
Strand: Direct
Name: 116623305
Synonym: Acid_4212
Alternate gene names: NA
Gene position: 5338012-5338791 (Clockwise)
Preceding gene: 116623304
Following gene: 116623309
Centisome position: 53.56
GC content: 63.72
Gene sequence:
>780_bases ATGGCCTTCTGCACAAGCTGCGGCGCCACCGTTCAGGGCGCCTTTTGTCCGCAATGCGGCACCGCGGTAAGTTCCTCCGC GAGTCAATCCGTACCCCCGCAGGCGGCTTACGCGCAAGCTGCGGCTCCCGCCGCGGTTCCGGGGAAGCGCAGGACCAGCC CGTGGGTCTGGATCCTGGTCGGGGTTCTCGGCCTCTTCTTGCTCTGCGTCATCGGCCTGATCAGCGCCGGAATCTTCGTG GCCCGCAATCCGGGAATGGTGATGGGCAAGTTGATCACTGCCGCCAATCCGAACGCCGAGGTCTTGAGCACCGATATGGG CTCCAAGACCATGCGACTTCGCGACAAACGCACCGGCAAGGAAATCACCGTCTCCTTCGATGATGTCAAGAATGGCAGGA TCCGCTTCAGCGCCACCGGCGACGATGGCCAGGAGGCCACCGTCGAAATCGGCGGTGGCGCCGGCCAGATGCCCCGGTGG GTGCCCGCCTACCCCGGCGCCAAAGCCCAGGGCAACATGACCGCAAAGGGCGAGGGCGCGGACGGCATGGGCGAAGGCGG CATGATCAGTTTCTCCACCGCCGACCCGGCTTCCAAAGTCATCGACTTCTACACCTCGAAATGCAAGGAAATGGGAATGA ACGTAGATGTGTCCGCGGTCACAACCGATGGCGGCACGCTCGTCGCCACCGATGAATCGGGCAATCGCGCGATCCACGTG ATGGTCGGAGGGCACGGAGACAACACCACCTTCGCGTTGACCTTCGGCCGGAAGCGGTAA
Upstream 100 bases:
>100_bases CGATCAAGTCGCTCGAGTTGACCTATAACGACGTGGTGATTAAACTCCGCTAGCTCCTCCCGTTTGCTTCCGGGATCGCG GTGGCGTAGGCTGTTGCATT
Downstream 100 bases:
>100_bases CGCTCAGCCGTGGCCCAGATACATGAGCCAGCCGATTCCGAATAAGGCCAGCATGAAGCACGCGAAGGTGTAAACGCCGT AGTGCAGGCGGTCGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAFCTSCGATVQGAFCPQCGTAVSSSASQSVPPQAAYAQAAAPAAVPGKRRTSPWVWILVGVLGLFLLCVIGLISAGIFV ARNPGMVMGKLITAANPNAEVLSTDMGSKTMRLRDKRTGKEITVSFDDVKNGRIRFSATGDDGQEATVEIGGGAGQMPRW VPAYPGAKAQGNMTAKGEGADGMGEGGMISFSTADPASKVIDFYTSKCKEMGMNVDVSAVTTDGGTLVATDESGNRAIHV MVGGHGDNTTFALTFGRKR
Sequences:
>Translated_259_residues MAFCTSCGATVQGAFCPQCGTAVSSSASQSVPPQAAYAQAAAPAAVPGKRRTSPWVWILVGVLGLFLLCVIGLISAGIFV ARNPGMVMGKLITAANPNAEVLSTDMGSKTMRLRDKRTGKEITVSFDDVKNGRIRFSATGDDGQEATVEIGGGAGQMPRW VPAYPGAKAQGNMTAKGEGADGMGEGGMISFSTADPASKVIDFYTSKCKEMGMNVDVSAVTTDGGTLVATDESGNRAIHV MVGGHGDNTTFALTFGRKR >Mature_258_residues AFCTSCGATVQGAFCPQCGTAVSSSASQSVPPQAAYAQAAAPAAVPGKRRTSPWVWILVGVLGLFLLCVIGLISAGIFVA RNPGMVMGKLITAANPNAEVLSTDMGSKTMRLRDKRTGKEITVSFDDVKNGRIRFSATGDDGQEATVEIGGGAGQMPRWV PAYPGAKAQGNMTAKGEGADGMGEGGMISFSTADPASKVIDFYTSKCKEMGMNVDVSAVTTDGGTLVATDESGNRAIHVM VGGHGDNTTFALTFGRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26683; Mature: 26552
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFCTSCGATVQGAFCPQCGTAVSSSASQSVPPQAAYAQAAAPAAVPGKRRTSPWVWILV CCEECCCCCEECCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH GVLGLFLLCVIGLISAGIFVARNPGMVMGKLITAANPNAEVLSTDMGSKTMRLRDKRTGK HHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCEEEECCCCCCEEEEHHCCCCC EITVSFDDVKNGRIRFSATGDDGQEATVEIGGGAGQMPRWVPAYPGAKAQGNMTAKGEGA EEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCC DGMGEGGMISFSTADPASKVIDFYTSKCKEMGMNVDVSAVTTDGGTLVATDESGNRAIHV CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCEEEEE MVGGHGDNTTFALTFGRKR EEECCCCCEEEEEEECCCC >Mature Secondary Structure AFCTSCGATVQGAFCPQCGTAVSSSASQSVPPQAAYAQAAAPAAVPGKRRTSPWVWILV CEECCCCCEECCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH GVLGLFLLCVIGLISAGIFVARNPGMVMGKLITAANPNAEVLSTDMGSKTMRLRDKRTGK HHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCEEEECCCCCCEEEEHHCCCCC EITVSFDDVKNGRIRFSATGDDGQEATVEIGGGAGQMPRWVPAYPGAKAQGNMTAKGEGA EEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCC DGMGEGGMISFSTADPASKVIDFYTSKCKEMGMNVDVSAVTTDGGTLVATDESGNRAIHV CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCEEEEE MVGGHGDNTTFALTFGRKR EEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA