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The map label for this gene is 116623216

Identifier: 116623216

GI number: 116623216

Start: 5235891

End: 5237108

Strand: Reverse

Name: 116623216

Synonym: Acid_4123

Alternate gene names: NA

Gene position: 5237108-5235891 (Counterclockwise)

Preceding gene: 116623218

Following gene: 116623197

Centisome position: 52.55

GC content: 59.11

Gene sequence:

>1218_bases
ATGAACCCTTCTGAATCCACTTTGTTGCGAGCGGCCCGCTGGCTGGCGTTCGGATCGGGCACTGCGATTATGGTGGGAAT
CGCGCCCTCGCAGATTTTCCTCGCGCTGGCCTTTGCGGCCCTCCTGGCATGCGGCGAGCCGTTGCGCCTGCCACGCATCA
AGCTCCCATTGGGGCTCTTTCTTTTGGGGACCATCATCTCACTGGCGTTCTCCGACAATCCTGCCGCGGGACTCCCGCAG
ATTCGGAAATTCTATGTCTTTCTCGAACTGCTGGTGATTTTCTCGCTACTGCGAAGCGTTGAGATGGTGCGGCTGCTGTT
TCTCAGTTGGGCTGGGATCGGTGCCGTGACCGCGGTTCGCGGCTTCGTACAATTCGCCTCCAAGGTGCAGGAAGCTCACC
GCCTCGGGCGCAATTTCTATGATTTTTACGTCGGCGAACGCATCACCGGCTTCACCAGCCACTGGAACACATACTCGGCC
GAGGAGATGTTCGCGTTCATCATGCTGGTTGCGTTCCTACTTTTTGCTCCGGGTACGCGCAAGCGGTTGTGGCTCTGGCT
CATCTGCGGTGCGCTGATATTGATTGCTATCGTGCTTGGCGAAACGCGCGGCATTTGGATCGCACTGGCGGTCGCGGGAC
TGTATCTCGTCTGGTTCTGGAAGCGTTGGATGGTGATTGCCGCGCCGGCGGTTGCGTTGTTGGGAATCGCGCTCGCGCCG
AGCGCCATGCAGGAGCGGTTCACTTCCATATTCAAGCCGAAGAGCGTCGATTCCAACCAGTTTCGCGTAGTGACGTGGCG
CACTGGCCTGCGCATGGTGAAAGCGCATCCGTGGCTTGGGCTCGGCCCCGAGGAGCCGCATCTTCAATTCGAAAAATACG
TCCCCGAGGATATCCCGCGCCCGCTGCCGTCCGGATGGTATGGCCATCTGCACAATATATATCTGCACTACGCCGCCGAG
CGCGGAATCCCAACGATGCTCGTGCTGCTGTGGATGCTGCTTCAAATTCTGTACGATTTCTGGCGCGGCCTTCGCATCCT
GCCGCCGGGGCCTTCCAACCGTCGATTCCTGTTGCACGGTGGAATTGCCGCCGTGCTGGCGACGATGGCCGAGGGTTTTG
TCGAACTGAACCTCGGGGATAGCGAAGTGCTCACCATGTTCCTGGTGATTGTGGCTTGCGGCTACCTTGCGCTGGAAAAG
GACCTCGCGTTCGATTGA

Upstream 100 bases:

>100_bases
AAGGCTTGGTGTGCAAGGAGTAAGAGGCAGAGGGCGCCGAGCGGGCGCGTTTGCAGGAACACAGGCTTTGAACGTCCTTC
CCTAGTATGATCGAATTGGA

Downstream 100 bases:

>100_bases
GCTTAACTTCCCATGTACTGCGACCGGCGCGACCCGCGATCCAACGGCAGGGCATATCCAATCAGGCAGAATTGATCGAG
CGCAAACAACACTACGGATT

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNPSESTLLRAARWLAFGSGTAIMVGIAPSQIFLALAFAALLACGEPLRLPRIKLPLGLFLLGTIISLAFSDNPAAGLPQ
IRKFYVFLELLVIFSLLRSVEMVRLLFLSWAGIGAVTAVRGFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSA
EEMFAFIMLVAFLLFAPGTRKRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKRWMVIAAPAVALLGIALAP
SAMQERFTSIFKPKSVDSNQFRVVTWRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPRPLPSGWYGHLHNIYLHYAAE
RGIPTMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHGGIAAVLATMAEGFVELNLGDSEVLTMFLVIVACGYLALEK
DLAFD

Sequences:

>Translated_405_residues
MNPSESTLLRAARWLAFGSGTAIMVGIAPSQIFLALAFAALLACGEPLRLPRIKLPLGLFLLGTIISLAFSDNPAAGLPQ
IRKFYVFLELLVIFSLLRSVEMVRLLFLSWAGIGAVTAVRGFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSA
EEMFAFIMLVAFLLFAPGTRKRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKRWMVIAAPAVALLGIALAP
SAMQERFTSIFKPKSVDSNQFRVVTWRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPRPLPSGWYGHLHNIYLHYAAE
RGIPTMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHGGIAAVLATMAEGFVELNLGDSEVLTMFLVIVACGYLALEK
DLAFD
>Mature_405_residues
MNPSESTLLRAARWLAFGSGTAIMVGIAPSQIFLALAFAALLACGEPLRLPRIKLPLGLFLLGTIISLAFSDNPAAGLPQ
IRKFYVFLELLVIFSLLRSVEMVRLLFLSWAGIGAVTAVRGFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSA
EEMFAFIMLVAFLLFAPGTRKRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKRWMVIAAPAVALLGIALAP
SAMQERFTSIFKPKSVDSNQFRVVTWRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPRPLPSGWYGHLHNIYLHYAAE
RGIPTMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHGGIAAVLATMAEGFVELNLGDSEVLTMFLVIVACGYLALEK
DLAFD

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45369; Mature: 45369

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSESTLLRAARWLAFGSGTAIMVGIAPSQIFLALAFAALLACGEPLRLPRIKLPLGLF
CCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHH
LLGTIISLAFSDNPAAGLPQIRKFYVFLELLVIFSLLRSVEMVRLLFLSWAGIGAVTAVR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSAEEMFAFIMLVAFLLFAPGTR
HHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
KRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKRWMVIAAPAVALLGIALAP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SAMQERFTSIFKPKSVDSNQFRVVTWRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPR
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCHHCCC
PLPSGWYGHLHNIYLHYAAERGIPTMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEC
GIAAVLATMAEGFVELNLGDSEVLTMFLVIVACGYLALEKDLAFD
CHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPSESTLLRAARWLAFGSGTAIMVGIAPSQIFLALAFAALLACGEPLRLPRIKLPLGLF
CCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHH
LLGTIISLAFSDNPAAGLPQIRKFYVFLELLVIFSLLRSVEMVRLLFLSWAGIGAVTAVR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSAEEMFAFIMLVAFLLFAPGTR
HHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
KRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKRWMVIAAPAVALLGIALAP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SAMQERFTSIFKPKSVDSNQFRVVTWRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPR
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCHHCCC
PLPSGWYGHLHNIYLHYAAERGIPTMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEC
GIAAVLATMAEGFVELNLGDSEVLTMFLVIVACGYLALEKDLAFD
CHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA