| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623107
Identifier: 116623107
GI number: 116623107
Start: 5082999
End: 5084144
Strand: Direct
Name: 116623107
Synonym: Acid_4011
Alternate gene names: NA
Gene position: 5082999-5084144 (Clockwise)
Preceding gene: 116623106
Following gene: 116623108
Centisome position: 51.01
GC content: 61.17
Gene sequence:
>1146_bases TTGAACAAACCTTCGCGTTTGTATTCGCTCGACGCGCTGCGCGGCTTAGTCATGATCATCATGGCGCTGGACCACGTGCG CGATTTCGTGCATTCGCAGGCGATGCTGTTCCCTCCGGAAAACCTGGCGCGAACCACGCCGATCCTCTTCTTCACCCGCT GGATCACGCATTTCTGCGCCCCCGTATTCATGTTCGCGAGCGGCATGGGCGCTTTCCTTTGGGCGCAGCGCAATACCGGG CTCTCGAGATTCTTGTGGACGCGCGGCTTGTGGCTGATCGTGCTCGAGCTCACCGTAATGCGCGTTTCATACTTCTTCAG CTTTTCCCTCGCGTACCCGGTCATGCTGGTCGTACTGTGGGCGCTGGGCGCCTCCATGATCGCGCTCGCGTTATTGAGCA AACTGCCGCTTCGCATGCTGGCGGTTGTCAGCATATTGACGATGGTCCTGCACAATCTGCTGGATGGCGTGAAGGACGGC GCCTTGTGGACGGTGCTCCACAGGCCGGGAGCGATTCCGATGGCCGGTACCGTGGTCTTCGTTGCCTATCCGCTGGTGCC GTGGATCGCGGTGATGGCGGCGGGCCACTGCTTCGGACAAGTTTTCCTGCTGACTCCCGAGCAGCGGCGCAGGATTCTGG CGAGGACGGGCACGGCATTGACACTCGCCTTCCTCGTGCTGCGCGCCATCAATATCTATGGCGACCCTTCGCGATGGTCG CCGACGATCTATCCGGTGCTTTCGTTCCTCAATTGCACGAAGTACCCGCCGTCGCTGGACTACCTGCTGATGACGCTGGG GCCGGCGATGCTTTGCCTGGCGTGGTTCGACGGCCTCTCGTGGAAGAAGGAGAATCCCCTGATCGTCTTCGGCCGCGTGC CGCTGTTTTACTTCGTGGTGCATTTTTACGCGGCCCACGCGATTGCCTCGGTGATGGCCGGCCTCCGCTACGGAAAGCTC TCGCTGATGTTCGGGCCGCTGCCCAACATGGGCGGTCCGCGGTCACGATTCCCCAACGGATTCGGCTACGATCTCTGGGT GGTGTACCTGATCTGGGCGCTGCTGGTGATCGCGATGTACCCGCTGTGCCGCTGGTACGCGGGCGTGAAAGCTCGACGGC AGGACTGGTGGTTGAGTTACCTTTGA
Upstream 100 bases:
>100_bases ATCAGGATCAGCCCAACGTTTTCGCGGAAAAGGAGTCGCCGCTGACCGGCAGCTGGCGCTTCCCGGCGGGCGCGGTGGCG GCGGTGGAGTTGGAGGTGGC
Downstream 100 bases:
>100_bases CGTTTATGAAACACCTTGCTGTGTTCTTGTACGCGGTCGCGAGCTTCGCGCAATCCGCGGATTTGCAGTACGATCCCGCG TCCCCGCAGGCCGCCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNKPSRLYSLDALRGLVMIIMALDHVRDFVHSQAMLFPPENLARTTPILFFTRWITHFCAPVFMFASGMGAFLWAQRNTG LSRFLWTRGLWLIVLELTVMRVSYFFSFSLAYPVMLVVLWALGASMIALALLSKLPLRMLAVVSILTMVLHNLLDGVKDG ALWTVLHRPGAIPMAGTVVFVAYPLVPWIAVMAAGHCFGQVFLLTPEQRRRILARTGTALTLAFLVLRAINIYGDPSRWS PTIYPVLSFLNCTKYPPSLDYLLMTLGPAMLCLAWFDGLSWKKENPLIVFGRVPLFYFVVHFYAAHAIASVMAGLRYGKL SLMFGPLPNMGGPRSRFPNGFGYDLWVVYLIWALLVIAMYPLCRWYAGVKARRQDWWLSYL
Sequences:
>Translated_381_residues MNKPSRLYSLDALRGLVMIIMALDHVRDFVHSQAMLFPPENLARTTPILFFTRWITHFCAPVFMFASGMGAFLWAQRNTG LSRFLWTRGLWLIVLELTVMRVSYFFSFSLAYPVMLVVLWALGASMIALALLSKLPLRMLAVVSILTMVLHNLLDGVKDG ALWTVLHRPGAIPMAGTVVFVAYPLVPWIAVMAAGHCFGQVFLLTPEQRRRILARTGTALTLAFLVLRAINIYGDPSRWS PTIYPVLSFLNCTKYPPSLDYLLMTLGPAMLCLAWFDGLSWKKENPLIVFGRVPLFYFVVHFYAAHAIASVMAGLRYGKL SLMFGPLPNMGGPRSRFPNGFGYDLWVVYLIWALLVIAMYPLCRWYAGVKARRQDWWLSYL >Mature_381_residues MNKPSRLYSLDALRGLVMIIMALDHVRDFVHSQAMLFPPENLARTTPILFFTRWITHFCAPVFMFASGMGAFLWAQRNTG LSRFLWTRGLWLIVLELTVMRVSYFFSFSLAYPVMLVVLWALGASMIALALLSKLPLRMLAVVSILTMVLHNLLDGVKDG ALWTVLHRPGAIPMAGTVVFVAYPLVPWIAVMAAGHCFGQVFLLTPEQRRRILARTGTALTLAFLVLRAINIYGDPSRWS PTIYPVLSFLNCTKYPPSLDYLLMTLGPAMLCLAWFDGLSWKKENPLIVFGRVPLFYFVVHFYAAHAIASVMAGLRYGKL SLMFGPLPNMGGPRSRFPNGFGYDLWVVYLIWALLVIAMYPLCRWYAGVKARRQDWWLSYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43188; Mature: 43188
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPSRLYSLDALRGLVMIIMALDHVRDFVHSQAMLFPPENLARTTPILFFTRWITHFCA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHH PVFMFASGMGAFLWAQRNTGLSRFLWTRGLWLIVLELTVMRVSYFFSFSLAYPVMLVVLW HHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGASMIALALLSKLPLRMLAVVSILTMVLHNLLDGVKDGALWTVLHRPGAIPMAGTVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH VAYPLVPWIAVMAAGHCFGQVFLLTPEQRRRILARTGTALTLAFLVLRAINIYGDPSRWS HHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC PTIYPVLSFLNCTKYPPSLDYLLMTLGPAMLCLAWFDGLSWKKENPLIVFGRVPLFYFVV CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHH HFYAAHAIASVMAGLRYGKLSLMFGPLPNMGGPRSRFPNGFGYDLWVVYLIWALLVIAMY HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PLCRWYAGVKARRQDWWLSYL HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKPSRLYSLDALRGLVMIIMALDHVRDFVHSQAMLFPPENLARTTPILFFTRWITHFCA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHH PVFMFASGMGAFLWAQRNTGLSRFLWTRGLWLIVLELTVMRVSYFFSFSLAYPVMLVVLW HHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGASMIALALLSKLPLRMLAVVSILTMVLHNLLDGVKDGALWTVLHRPGAIPMAGTVVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH VAYPLVPWIAVMAAGHCFGQVFLLTPEQRRRILARTGTALTLAFLVLRAINIYGDPSRWS HHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC PTIYPVLSFLNCTKYPPSLDYLLMTLGPAMLCLAWFDGLSWKKENPLIVFGRVPLFYFVV CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHH HFYAAHAIASVMAGLRYGKLSLMFGPLPNMGGPRSRFPNGFGYDLWVVYLIWALLVIAMY HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PLCRWYAGVKARRQDWWLSYL HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA