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The map label for this gene is 116623082

Identifier: 116623082

GI number: 116623082

Start: 5054758

End: 5055771

Strand: Direct

Name: 116623082

Synonym: Acid_3986

Alternate gene names: NA

Gene position: 5054758-5055771 (Clockwise)

Preceding gene: 116623076

Following gene: 116623084

Centisome position: 50.72

GC content: 59.37

Gene sequence:

>1014_bases
GTGGACCGGCCGGGCACCACGTTCAAGATTTTCCAATTCCCGGCCGACCGGATTCCGCGCATCGACGGCAATACGGACGA
TTGGAAAATGGTGCCGGAGAGCTACGCGATCGGCATGGATCAATTGGTGGACGATACGAATAAGGACCGCAAGCCCGACC
CGAAGGATCTCGACGTCAAGGTCAAAGTTGGCTGGGTGAAGGGGCTCAACCGCCTCTACTTCCTGTATGAGGCTTACGAC
AACTACTGGGATTTCGCGCGTCCCGGCCTGCACAACGATATCTTCGAGGTGGTGGTGGATGGTGATCTCTCCGGCGGTCC
ATTGATCGAGCGGTTTCAGCCGACGAAGGAATTGAGCGAGCGCGACGCGCATTTTTCGATGCATGGCGTTCACGCGCAGA
ACTATCACATCATGACGCCGCCGCTCGGCAAGGACTGGGCGCTGGCATGGGGTTGCAACGCGTACGTCAAGAACCTGCCC
TATGCCAACGCCGCTTACGACTATCATTTCAAACCTGGCGAATCGGGAAAACTCGTGCTCGAGTTCTGGATTACGCCCTT
CGATTACGCCGGCTGCGAGGGGCCGCAGCGCGCCGTGGAATCGGTGTTGACCGAGGATAAGCTGATCGGCCTGGCCTGGG
CGGTGCTCGATTACGACAACGCCAACAGCGAGCAGCACGCCTTCTGGAATCTCTCGCGGCAGCACACGATGTACGGCAAG
GCCGATGAGCTGGTGGCCTTCCGGCTGATGCCGCTGGAGCCGGAGTTCCGCAGGTTCGAGGCGAACTGGAGTTTTCAGGT
GCTCGATATGCCGCGCCGCCGCGTGGCCTTCCATGACGAGACCACCGGGAAGGCGACCTCGTGGAAATGGAATTTTGGCG
ACGGCGCGACATCGGTGGAACAGAATCCCGTCCACGAGTATGCGAAGGGCGGCGATTTCATCGTAACCCTGGAAGTGGAA
GGTCCCGAGGGAAAATCGCAGCGCGAGAAGATTTGGGACGTTTCGTTGAGGTAG

Upstream 100 bases:

>100_bases
ATGTTCCATCGGGTCGGTCAAACCGATACTATACACGGTGTACAAACCTATGAGATACGTTCTCCTTCTGGCTTTCGCCC
TGAGTCTGCCGGCGTTTGCC

Downstream 100 bases:

>100_bases
GCTACAAGCCGTTCTCGGCTTCGATGCGGGCGAGCTCGGTGCGGACGCGGGTCAGGACACTGGTGAACTGAAGCCAGTTT
TCACCGGCACTTTCCTTGCG

Product: PKD domain-containing protein

Products: NA

Alternate protein names: Cell Surface Protein; PKD Domain Protein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MDRPGTTFKIFQFPADRIPRIDGNTDDWKMVPESYAIGMDQLVDDTNKDRKPDPKDLDVKVKVGWVKGLNRLYFLYEAYD
NYWDFARPGLHNDIFEVVVDGDLSGGPLIERFQPTKELSERDAHFSMHGVHAQNYHIMTPPLGKDWALAWGCNAYVKNLP
YANAAYDYHFKPGESGKLVLEFWITPFDYAGCEGPQRAVESVLTEDKLIGLAWAVLDYDNANSEQHAFWNLSRQHTMYGK
ADELVAFRLMPLEPEFRRFEANWSFQVLDMPRRRVAFHDETTGKATSWKWNFGDGATSVEQNPVHEYAKGGDFIVTLEVE
GPEGKSQREKIWDVSLR

Sequences:

>Translated_337_residues
MDRPGTTFKIFQFPADRIPRIDGNTDDWKMVPESYAIGMDQLVDDTNKDRKPDPKDLDVKVKVGWVKGLNRLYFLYEAYD
NYWDFARPGLHNDIFEVVVDGDLSGGPLIERFQPTKELSERDAHFSMHGVHAQNYHIMTPPLGKDWALAWGCNAYVKNLP
YANAAYDYHFKPGESGKLVLEFWITPFDYAGCEGPQRAVESVLTEDKLIGLAWAVLDYDNANSEQHAFWNLSRQHTMYGK
ADELVAFRLMPLEPEFRRFEANWSFQVLDMPRRRVAFHDETTGKATSWKWNFGDGATSVEQNPVHEYAKGGDFIVTLEVE
GPEGKSQREKIWDVSLR
>Mature_337_residues
MDRPGTTFKIFQFPADRIPRIDGNTDDWKMVPESYAIGMDQLVDDTNKDRKPDPKDLDVKVKVGWVKGLNRLYFLYEAYD
NYWDFARPGLHNDIFEVVVDGDLSGGPLIERFQPTKELSERDAHFSMHGVHAQNYHIMTPPLGKDWALAWGCNAYVKNLP
YANAAYDYHFKPGESGKLVLEFWITPFDYAGCEGPQRAVESVLTEDKLIGLAWAVLDYDNANSEQHAFWNLSRQHTMYGK
ADELVAFRLMPLEPEFRRFEANWSFQVLDMPRRRVAFHDETTGKATSWKWNFGDGATSVEQNPVHEYAKGGDFIVTLEVE
GPEGKSQREKIWDVSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38798; Mature: 38798

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPGTTFKIFQFPADRIPRIDGNTDDWKMVPESYAIGMDQLVDDTNKDRKPDPKDLDVK
CCCCCCEEEEEECCHHHCCCCCCCCCCCEECCHHHHCCHHHHHCCCCCCCCCCCCCCEEE
VKVGWVKGLNRLYFLYEAYDNYWDFARPGLHNDIFEVVVDGDLSGGPLIERFQPTKELSE
EEEEHHHCCCCEEEEEEHHCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHH
RDAHFSMHGVHAQNYHIMTPPLGKDWALAWGCNAYVKNLPYANAAYDYHFKPGESGKLVL
CCCCEEEECEEECCEEEECCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCEEE
EFWITPFDYAGCEGPQRAVESVLTEDKLIGLAWAVLDYDNANSEQHAFWNLSRQHTMYGK
EEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCCCC
ADELVAFRLMPLEPEFRRFEANWSFQVLDMPRRRVAFHDETTGKATSWKWNFGDGATSVE
CCCEEEEEEECCCHHHHEEECCCCEEEECCCCHHEEECCCCCCCEEEEEEECCCCCCCCC
QNPVHEYAKGGDFIVTLEVEGPEGKSQREKIWDVSLR
CCCHHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCC
>Mature Secondary Structure
MDRPGTTFKIFQFPADRIPRIDGNTDDWKMVPESYAIGMDQLVDDTNKDRKPDPKDLDVK
CCCCCCEEEEEECCHHHCCCCCCCCCCCEECCHHHHCCHHHHHCCCCCCCCCCCCCCEEE
VKVGWVKGLNRLYFLYEAYDNYWDFARPGLHNDIFEVVVDGDLSGGPLIERFQPTKELSE
EEEEHHHCCCCEEEEEEHHCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHH
RDAHFSMHGVHAQNYHIMTPPLGKDWALAWGCNAYVKNLPYANAAYDYHFKPGESGKLVL
CCCCEEEECEEECCEEEECCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCEEE
EFWITPFDYAGCEGPQRAVESVLTEDKLIGLAWAVLDYDNANSEQHAFWNLSRQHTMYGK
EEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCCCC
ADELVAFRLMPLEPEFRRFEANWSFQVLDMPRRRVAFHDETTGKATSWKWNFGDGATSVE
CCCEEEEEEECCCHHHHEEECCCCEEEECCCCHHEEECCCCCCCEEEEEEECCCCCCCCC
QNPVHEYAKGGDFIVTLEVEGPEGKSQREKIWDVSLR
CCCHHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA