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The map label for this gene is atoS [C]

Identifier: 116623028

GI number: 116623028

Start: 4972479

End: 4974533

Strand: Reverse

Name: atoS [C]

Synonym: Acid_3932

Alternate gene names: 116623028

Gene position: 4974533-4972479 (Counterclockwise)

Preceding gene: 116623032

Following gene: 116623027

Centisome position: 49.92

GC content: 63.07

Gene sequence:

>2055_bases
GTGAACAAAAGGCTGTGGGCAGGCATCGTCGCCTTGCTGGCCGCAGTAGCGGTCTTTACGTGGTATTGCATGCGGCCGCC
GGATTTCGGCAATCGCGTCTACCGCATTGGCTGGATGATCTCCCCTCCTTTCCAGTTGCGCGGCCCGGATGGCGGACCCT
CCGGCATCTCGGTCGAACTCGTGAAACAGGCGGCTCGCCGCGTCGGCATCAAGCTTGAATGGCGCTACTGGAATAGCACA
TCGGACTCGGCCCTCCTCAGCAACAGCGTGGACCTCTGGCCGCTGATCACGATCCGGCCGGAGCGGCTCAAGGTTCTTCA
CATCACCGACCCCTATCTGCAGCACGAACACTGCCTGCTGGTGCGCGACGACTCCTCCTTCACCCGCGCGGAAGACCTGG
CCACCGCGAACATCGGTATGGCCAATGTCAATATCGATGCGCGCCTTCTGCACACCATCCTGCCCCACGCCGTGCCGGTA
CCCAGCGATCTGATCGGCGGCGCCATAGATGACGTGTGCAACCGTGCCGCCGATGCCGCCTTCATGGACCGGTTCACGGC
CACGGCCGCCCTCCTGCAGCGGGGCGGTTGTGGCGGACACGCCCTGCGCTGGATCCCGGTCCCGCAACTTCACGTCCAAC
TCGGCGTTGGCTCCACCTTCGAGCATAAGGACGCGGCCGACGCTATTCGGCGGGAAATCGGAGCTCTCGCGCAGGAAGGC
AAACTCGCCAGCATCTTCGGGCAATGGGGCTACATGTCGGGTCAGGACGCCGCCATTATGGGCGTCATCGATTCAAGGCG
CCGCGAAGCCCGCCTTTTCACAATCGCGCTGGTCTTCGCCTTAATGTTCCTGCTCGCCGTCTGGCAGACGGTGCGTCTCA
CCCGCGAAAAGACACGCACCCTGGAGGCCGAAAAGGCGCTCCGTGAATCGCAGGAGCGCTACATGCAGTCCCAGAAAATG
GAAAGCATCGGCCGCCTGGCCGGCGGCGTCGCCCACGACTTCAATAACATCCTCACTGTCATTAATGGGTACAGCGACAT
CGTCTACCACCAGCTTTCCGAAGTGGACCCCAGGCGCGCGCAGGTCAACGAAATCCGCAAGGCAGGAGCTCATGCCGCCG
AACTCACGCAACAACTGCTGGCCTTCAGCCGCAAACAGGTAGGCCGTCCCAGGCCCGTTAATCTCAATAGCGTGGTGAGT
GAGGCCGAGAAAATGCTGCGCCGCATCCTCGGTGAAGACGTCCGCTTGATCACCCGCCTCGATCCCTCCACCGGCCTGAT
CCTCGCCGATCCCGGCTACGTTCACCAGATGCTGATGAACCTCGCCGTCAACGCGCGCGACGCGATGCCGGATGGCGGTT
CGCTGGTGATTGAAACCTCCGACGCGCAACGCCATGACGAGGAGGGCTCGCGAATTGCCGTTTGCCTCTCGGTGACCGAT
ACGGGCAGCGGCATGGACGAGGAGACCCGAAAAAATATCTTCGAGCCATTCTTTACCACCAAGGGCACCAAGGGCACAGG
CCTCGGTCTCGCCACCGTGTACGGCATCGTTCAACAGAGCCAGGGCAGCATTGAGGTCTTGACCGAGCCCGGCAAGGGCT
CGACCTTCCGCGTGTACCTGCCTCGCGTCGAAGGCGTCGATGAGTCACCCGTGCCCAAGCCTGCCGCCGCGGTTGCGGTC
CACGGCGCCGAGACCATCCTGGTGGTTGAGGACCAGGACGAAGTGCGCTGCTTCGTCGTCGATGTGCTCGCCCGCCGCGG
CTACCGCGTACTCCAGGCGGGCGATGGCCCGCAGGCGCTCGCCGTTGCCGAACAATGCACCGGAAAGATCGATGTCCTTC
TCACCGATGTCGTCCTTCCCGGGATGAACGGACGTGAACTCGCGGAGCGCTTTCGGGAACTCCGGCCCGCGACCAAAATC
ATCTACACCTCGGGCTATACGCAGGACCTCATCGCCGATCGCGGCATCCTCCACCGAGACGTGAACTATGTCCCCAAGCC
CTACACCGCCGACCAGATCACCGCCAAAGTCCGCGAAGCCATCGACGCCCCCTAG

Upstream 100 bases:

>100_bases
CAAGCGTGTTAACCCGAACAATTGGTGAGAGCATCTTTCCCTCCGATACACGAGTTAATTGTACGCGCCTTGCTGTATTC
TTGTTGATACTGGTGAACGG

Downstream 100 bases:

>100_bases
CCTGTCCACCTTGCTCTGCGCGTCACTGGTGGGGCATGCTTTACCTTGCCCGTCCGTTGTATCCTATCCTTTCCATGCAG
ATCTTACGTTGCCTCCTCCC

Product: integral membrane sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MNKRLWAGIVALLAAVAVFTWYCMRPPDFGNRVYRIGWMISPPFQLRGPDGGPSGISVELVKQAARRVGIKLEWRYWNST
SDSALLSNSVDLWPLITIRPERLKVLHITDPYLQHEHCLLVRDDSSFTRAEDLATANIGMANVNIDARLLHTILPHAVPV
PSDLIGGAIDDVCNRAADAAFMDRFTATAALLQRGGCGGHALRWIPVPQLHVQLGVGSTFEHKDAADAIRREIGALAQEG
KLASIFGQWGYMSGQDAAIMGVIDSRRREARLFTIALVFALMFLLAVWQTVRLTREKTRTLEAEKALRESQERYMQSQKM
ESIGRLAGGVAHDFNNILTVINGYSDIVYHQLSEVDPRRAQVNEIRKAGAHAAELTQQLLAFSRKQVGRPRPVNLNSVVS
EAEKMLRRILGEDVRLITRLDPSTGLILADPGYVHQMLMNLAVNARDAMPDGGSLVIETSDAQRHDEEGSRIAVCLSVTD
TGSGMDEETRKNIFEPFFTTKGTKGTGLGLATVYGIVQQSQGSIEVLTEPGKGSTFRVYLPRVEGVDESPVPKPAAAVAV
HGAETILVVEDQDEVRCFVVDVLARRGYRVLQAGDGPQALAVAEQCTGKIDVLLTDVVLPGMNGRELAERFRELRPATKI
IYTSGYTQDLIADRGILHRDVNYVPKPYTADQITAKVREAIDAP

Sequences:

>Translated_684_residues
MNKRLWAGIVALLAAVAVFTWYCMRPPDFGNRVYRIGWMISPPFQLRGPDGGPSGISVELVKQAARRVGIKLEWRYWNST
SDSALLSNSVDLWPLITIRPERLKVLHITDPYLQHEHCLLVRDDSSFTRAEDLATANIGMANVNIDARLLHTILPHAVPV
PSDLIGGAIDDVCNRAADAAFMDRFTATAALLQRGGCGGHALRWIPVPQLHVQLGVGSTFEHKDAADAIRREIGALAQEG
KLASIFGQWGYMSGQDAAIMGVIDSRRREARLFTIALVFALMFLLAVWQTVRLTREKTRTLEAEKALRESQERYMQSQKM
ESIGRLAGGVAHDFNNILTVINGYSDIVYHQLSEVDPRRAQVNEIRKAGAHAAELTQQLLAFSRKQVGRPRPVNLNSVVS
EAEKMLRRILGEDVRLITRLDPSTGLILADPGYVHQMLMNLAVNARDAMPDGGSLVIETSDAQRHDEEGSRIAVCLSVTD
TGSGMDEETRKNIFEPFFTTKGTKGTGLGLATVYGIVQQSQGSIEVLTEPGKGSTFRVYLPRVEGVDESPVPKPAAAVAV
HGAETILVVEDQDEVRCFVVDVLARRGYRVLQAGDGPQALAVAEQCTGKIDVLLTDVVLPGMNGRELAERFRELRPATKI
IYTSGYTQDLIADRGILHRDVNYVPKPYTADQITAKVREAIDAP
>Mature_684_residues
MNKRLWAGIVALLAAVAVFTWYCMRPPDFGNRVYRIGWMISPPFQLRGPDGGPSGISVELVKQAARRVGIKLEWRYWNST
SDSALLSNSVDLWPLITIRPERLKVLHITDPYLQHEHCLLVRDDSSFTRAEDLATANIGMANVNIDARLLHTILPHAVPV
PSDLIGGAIDDVCNRAADAAFMDRFTATAALLQRGGCGGHALRWIPVPQLHVQLGVGSTFEHKDAADAIRREIGALAQEG
KLASIFGQWGYMSGQDAAIMGVIDSRRREARLFTIALVFALMFLLAVWQTVRLTREKTRTLEAEKALRESQERYMQSQKM
ESIGRLAGGVAHDFNNILTVINGYSDIVYHQLSEVDPRRAQVNEIRKAGAHAAELTQQLLAFSRKQVGRPRPVNLNSVVS
EAEKMLRRILGEDVRLITRLDPSTGLILADPGYVHQMLMNLAVNARDAMPDGGSLVIETSDAQRHDEEGSRIAVCLSVTD
TGSGMDEETRKNIFEPFFTTKGTKGTGLGLATVYGIVQQSQGSIEVLTEPGKGSTFRVYLPRVEGVDESPVPKPAAAVAV
HGAETILVVEDQDEVRCFVVDVLARRGYRVLQAGDGPQALAVAEQCTGKIDVLLTDVVLPGMNGRELAERFRELRPATKI
IYTSGYTQDLIADRGILHRDVNYVPKPYTADQITAKVREAIDAP

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=241, Percent_Identity=36.0995850622407, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1790436, Length=275, Percent_Identity=29.8181818181818, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI1788713, Length=224, Percent_Identity=30.3571428571429, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI87081816, Length=388, Percent_Identity=24.4845360824742, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=27.6859504132231, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=30.7377049180328, Blast_Score=73, Evalue=8e-14,
Organism=Escherichia coli, GI48994928, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 75265; Mature: 75265

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLWAGIVALLAAVAVFTWYCMRPPDFGNRVYRIGWMISPPFQLRGPDGGPSGISVEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHH
VKQAARRVGIKLEWRYWNSTSDSALLSNSVDLWPLITIRPERLKVLHITDPYLQHEHCLL
HHHHHHHCCCEEEEEEECCCCCCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEEE
VRDDSSFTRAEDLATANIGMANVNIDARLLHTILPHAVPVPSDLIGGAIDDVCNRAADAA
EECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FMDRFTATAALLQRGGCGGHALRWIPVPQLHVQLGVGSTFEHKDAADAIRREIGALAQEG
HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
KLASIFGQWGYMSGQDAAIMGVIDSRRREARLFTIALVFALMFLLAVWQTVRLTREKTRT
CHHHHHHCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAEKALRESQERYMQSQKMESIGRLAGGVAHDFNNILTVINGYSDIVYHQLSEVDPRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHH
QVNEIRKAGAHAAELTQQLLAFSRKQVGRPRPVNLNSVVSEAEKMLRRILGEDVRLITRL
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
DPSTGLILADPGYVHQMLMNLAVNARDAMPDGGSLVIETSDAQRHDEEGSRIAVCLSVTD
CCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC
TGSGMDEETRKNIFEPFFTTKGTKGTGLGLATVYGIVQQSQGSIEVLTEPGKGSTFRVYL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEE
PRVEGVDESPVPKPAAAVAVHGAETILVVEDQDEVRCFVVDVLARRGYRVLQAGDGPQAL
CCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHH
AVAEQCTGKIDVLLTDVVLPGMNGRELAERFRELRPATKIIYTSGYTQDLIADRGILHRD
HHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHCCHHEEEEECCCCHHHHHCCCHHHCC
VNYVPKPYTADQITAKVREAIDAP
CCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRLWAGIVALLAAVAVFTWYCMRPPDFGNRVYRIGWMISPPFQLRGPDGGPSGISVEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHH
VKQAARRVGIKLEWRYWNSTSDSALLSNSVDLWPLITIRPERLKVLHITDPYLQHEHCLL
HHHHHHHCCCEEEEEEECCCCCCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEEE
VRDDSSFTRAEDLATANIGMANVNIDARLLHTILPHAVPVPSDLIGGAIDDVCNRAADAA
EECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FMDRFTATAALLQRGGCGGHALRWIPVPQLHVQLGVGSTFEHKDAADAIRREIGALAQEG
HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
KLASIFGQWGYMSGQDAAIMGVIDSRRREARLFTIALVFALMFLLAVWQTVRLTREKTRT
CHHHHHHCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAEKALRESQERYMQSQKMESIGRLAGGVAHDFNNILTVINGYSDIVYHQLSEVDPRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHH
QVNEIRKAGAHAAELTQQLLAFSRKQVGRPRPVNLNSVVSEAEKMLRRILGEDVRLITRL
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
DPSTGLILADPGYVHQMLMNLAVNARDAMPDGGSLVIETSDAQRHDEEGSRIAVCLSVTD
CCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC
TGSGMDEETRKNIFEPFFTTKGTKGTGLGLATVYGIVQQSQGSIEVLTEPGKGSTFRVYL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEE
PRVEGVDESPVPKPAAAVAVHGAETILVVEDQDEVRCFVVDVLARRGYRVLQAGDGPQAL
CCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHH
AVAEQCTGKIDVLLTDVVLPGMNGRELAERFRELRPATKIIYTSGYTQDLIADRGILHRD
HHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHCCHHEEEEECCCCHHHHHCCCHHHCC
VNYVPKPYTADQITAKVREAIDAP
CCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA