| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623014
Identifier: 116623014
GI number: 116623014
Start: 4951967
End: 4952845
Strand: Direct
Name: 116623014
Synonym: Acid_3918
Alternate gene names: NA
Gene position: 4951967-4952845 (Clockwise)
Preceding gene: 116623013
Following gene: 116623025
Centisome position: 49.69
GC content: 64.05
Gene sequence:
>879_bases GTGAAACCTGCACTATGGTGCCTCGCGTTCGGGATTCTTCCCCTGCCGGGCCAGGTCGCCGCCCTTGCGGTCTACACAGA ATTTCAGCACACGCCCAACGCGGCGGTAGTCGATTCCATGCATGCGGAAGTGGATTCGATCATCCTGCCCCTCGGCCTTG GCTTGGAGTGGAGGTCGCTCGACGGGCATGGCGATCAGGTCTCGGGCGAGCTGGCGGTAGTTTCTTTCAAGGGCACTTGC GACAGCGGCGCCCAGCCTTCACACGCCGACGATTCGCGCAGCCTGGGTTGGACGCACATCAGCGATGGGCAGATCCTTCC GTTCACGGACGTGGACTGCGACCGGATCCGAGCTTTCGTGCGAACCCGGATCAACGGCAGCGATCCCAACGACCGCGACC GGCTGCTCGGCCGGGCTGTGGGCCGCGTGTTGGCGCACGAGCTGTACCACATCCTGGCGAGAAGGTCCCACCATGGGTCC GGAAGCGTGGACCGGCCCGAGTACGCCTCCCGCGATCTGGTGAGCGACGACTTTCAGCTTCAGGAAACGGAATGCCGGAT CCTGCAGCTCGTGAACTCAGGGGCAATTCCGTCGGGGATTGCCGATATCGAAGGGGCTACCGGGTCGGCGAAGCAGGGCG AGGCCAAGTTTCTGAAGGAACGCTGCAGTGTGTGCCACGGTCCGCGGGGACAGGGAACGCGCAACGGTCCGCCGCTGCGC AAGGGGGCGCATGCAGTGAGCCCCGTTGTACTCGCGGCGCAGCTGGGCATCGATAGCGTGGCGATGTGCCGGCGCGCGAA GCAGCTGAAGTTACCGCCGCTCTCAATCAGTGCCGGCGATTTACCGGACCTCGTGCGATTTCTCAATGGCCTACTCTAA
Upstream 100 bases:
>100_bases ACCGAAGTCTGGGCGCTCGAGCCAGGCAAACCGGTGCAGTGGTAAAACGGTTGACTTAGGGCGTGCAGGCTGTTGTATTG AAACAGACGTTCACCTTGTC
Downstream 100 bases:
>100_bases TCGTGCCGGAGAGCCGTCAGCGGATCAATTCGGGATGCCCGCCGTGCCGGCGCATAGCCGGCGAGAATCACGGCGCTCAG GAGGACGACACCGGCCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKPALWCLAFGILPLPGQVAALAVYTEFQHTPNAAVVDSMHAEVDSIILPLGLGLEWRSLDGHGDQVSGELAVVSFKGTC DSGAQPSHADDSRSLGWTHISDGQILPFTDVDCDRIRAFVRTRINGSDPNDRDRLLGRAVGRVLAHELYHILARRSHHGS GSVDRPEYASRDLVSDDFQLQETECRILQLVNSGAIPSGIADIEGATGSAKQGEAKFLKERCSVCHGPRGQGTRNGPPLR KGAHAVSPVVLAAQLGIDSVAMCRRAKQLKLPPLSISAGDLPDLVRFLNGLL
Sequences:
>Translated_292_residues MKPALWCLAFGILPLPGQVAALAVYTEFQHTPNAAVVDSMHAEVDSIILPLGLGLEWRSLDGHGDQVSGELAVVSFKGTC DSGAQPSHADDSRSLGWTHISDGQILPFTDVDCDRIRAFVRTRINGSDPNDRDRLLGRAVGRVLAHELYHILARRSHHGS GSVDRPEYASRDLVSDDFQLQETECRILQLVNSGAIPSGIADIEGATGSAKQGEAKFLKERCSVCHGPRGQGTRNGPPLR KGAHAVSPVVLAAQLGIDSVAMCRRAKQLKLPPLSISAGDLPDLVRFLNGLL >Mature_292_residues MKPALWCLAFGILPLPGQVAALAVYTEFQHTPNAAVVDSMHAEVDSIILPLGLGLEWRSLDGHGDQVSGELAVVSFKGTC DSGAQPSHADDSRSLGWTHISDGQILPFTDVDCDRIRAFVRTRINGSDPNDRDRLLGRAVGRVLAHELYHILARRSHHGS GSVDRPEYASRDLVSDDFQLQETECRILQLVNSGAIPSGIADIEGATGSAKQGEAKFLKERCSVCHGPRGQGTRNGPPLR KGAHAVSPVVLAAQLGIDSVAMCRRAKQLKLPPLSISAGDLPDLVRFLNGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31313; Mature: 31313
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00142 ZINC_PROTEASE ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPALWCLAFGILPLPGQVAALAVYTEFQHTPNAAVVDSMHAEVDSIILPLGLGLEWRSL CCHHHHHHHHHCCCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DGHGDQVSGELAVVSFKGTCDSGAQPSHADDSRSLGWTHISDGQILPFTDVDCDRIRAFV CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHH RTRINGSDPNDRDRLLGRAVGRVLAHELYHILARRSHHGSGSVDRPEYASRDLVSDDFQL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHH QETECRILQLVNSGAIPSGIADIEGATGSAKQGEAKFLKERCSVCHGPRGQGTRNGPPLR HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC KGAHAVSPVVLAAQLGIDSVAMCRRAKQLKLPPLSISAGDLPDLVRFLNGLL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKPALWCLAFGILPLPGQVAALAVYTEFQHTPNAAVVDSMHAEVDSIILPLGLGLEWRSL CCHHHHHHHHHCCCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DGHGDQVSGELAVVSFKGTCDSGAQPSHADDSRSLGWTHISDGQILPFTDVDCDRIRAFV CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHH RTRINGSDPNDRDRLLGRAVGRVLAHELYHILARRSHHGSGSVDRPEYASRDLVSDDFQL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHH QETECRILQLVNSGAIPSGIADIEGATGSAKQGEAKFLKERCSVCHGPRGQGTRNGPPLR HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC KGAHAVSPVVLAAQLGIDSVAMCRRAKQLKLPPLSISAGDLPDLVRFLNGLL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA