| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ywrD [H]
Identifier: 116623025
GI number: 116623025
Start: 4965710
End: 4967452
Strand: Direct
Name: ywrD [H]
Synonym: Acid_3929
Alternate gene names: 116623025
Gene position: 4965710-4967452 (Clockwise)
Preceding gene: 116623014
Following gene: 116623029
Centisome position: 49.83
GC content: 63.91
Gene sequence:
>1743_bases ATGAAATTGCTGCTACTTGCGATGGCAATTGCCTGCGTCATCTCGGCGCAGGATGACGGTCCCGCGACCCCAACCCGAAC GTCCGGCGGCACTCCAGCCGCAGCGCCGCCGCCGGCCCGCGAGCAGGCTCGTTCGATGATCGTCACGCAGTACGGCATTG TGGCGGCGTCGCAGTTCCTGGCATCGCAGGCCGGGGCGAAGATGCTGGAGCAGGGCGGCAATGCGATTGATGCGGCGATC GCGGCGAATGCAGTGCTCGGGCTGACGCAGCCGTATGTGAATGGCATGGGCGGCGACCTGTTCGCGATCGTGTACGAGGC GAAGACGGGAAAGGTCTACGGGCTCAACTCGAGCGGATGGACTCCGAAGGCGCTGACCATCGACTACCTGAAGAGCAAGG GAATCGACAAGATTGACCGCACCGGCGTGCACACGATCACGGTGCCGGGCTGCGTGGCGGGTTGGGACGCGCTGCGCAAG CGCTTCGGGACCAAGCCGTTTTCGGAACTGCTGGCATCGGCGATCTTTTATGCGGAGAACGGTTTCCCGCTGCCCGAGTT CGGGGCGCGGTCGTGGATCTCGCAGCCGCTGTTGAAGCAGCCGGGGTATGCGCAGACCTATCTGCCGGGCGGCAAGCGTC CGCAGCTGGGCGACGTGTTCAAGAATCCGGCGCTGGGCGAATCGCTGCGGCAAGTGGCGGCGAAGGGTCGCGACGGATAT TACAAGGGCAAGATGGCTGAGAACCTGGTGTCGTTTTTGCGCGAGCAGGGCGGCGCGCACACGCTGCAAGATTTCTCGGA GTTCGAGCCGGAGTGGGTGGAGCCAATTTCGACCACGTACCGCGGCTGGGATGTGTTCGAGCTGCCGCCCAACGGACAGG GCGTGGCGGCGCTTTCGATGCTGAACATCATGGAGAATTTCCCGTTGAAGGATTACGGGCACAATTCGGCGGCGGCGCTG CACGTGATGATCGAGGCGAAGAAGCTGGCGTACGCCGATATGGCGCGGTATGTAGGCGATCCGCGGTTCGGCCCGGTGCC GGTGAAGGAGATGCTCTCGAAGGACCTGGCGAAGCAGCGCGCCGGGTTGATCAGCATGGAGAAGGCGAGCTGCAAGGTGC TGCCCTCGGAGATCCGTCAAGAGTTGGACGCACACGGGCACGAGACGATTTATATGTCGGCGATCGACAAAGAGGGCAAC ATCGTATCGCTGATTCAGAGCAATTACGCGGGGTACGGCACGGGGATGGTGGCGCCGGGAGCGGGGTTCAGCTTCCACAA TCGCGGGGCGGGATTCGATATGGAGCCGGGCAAGCCGAATTCGCTCGCCGGGAGGAAGAGGCCGCTGCATACGATCATCC CGGCGTTCATGCGCAAGGGCGATGTGACGGTGGGCTTCGGGATCATGGGCGGGTGGAATCAATCGCAGGCGCACGCGCAG TTCGTGGCGAACGTGGTGGATTTCGGGATGAATGTGCAGATGGCGCTGGAATCGGCGCGGTTCACCAAGGGGACATTCGA TGGCTGCGATTTGCAAATGGAATCGCGGGTGCCGGAGGCGGTGCGGCAGGAGCTCGCGCGGCGCGGGCACGTGATCACGC CGGTGGGCGCGTTCGCGACCGCGATGGGGAATGGCGAGGCGGTGATGCGCGATGCCAAGCGCGGCGTGAATTTCGGGGCA AGCGATCCGCGGACGGATGGCGCGGCGATCCCGCAGCAGCCGAATGTGGGGACGATTAAGTAG
Upstream 100 bases:
>100_bases GCCGTGTCCGAAAGCCAGCAACTCCATCTCGCGATGAAGCGAGGGACTGTGCCACTTCACGTAGTCTCTTTGCATCCCAC GTCATGGTACACTTTTCGCC
Downstream 100 bases:
>100_bases GGCGAGGAGTGCCGCGCATTGCGGCGAGCCGCGAATTGGGCGTCGCAAGGGGTCGAGCCGGCTGCACGGTCGAAAGCCAA GGCGAGCAAGGGAATACTCT
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MKLLLLAMAIACVISAQDDGPATPTRTSGGTPAAAPPPAREQARSMIVTQYGIVAASQFLASQAGAKMLEQGGNAIDAAI AANAVLGLTQPYVNGMGGDLFAIVYEAKTGKVYGLNSSGWTPKALTIDYLKSKGIDKIDRTGVHTITVPGCVAGWDALRK RFGTKPFSELLASAIFYAENGFPLPEFGARSWISQPLLKQPGYAQTYLPGGKRPQLGDVFKNPALGESLRQVAAKGRDGY YKGKMAENLVSFLREQGGAHTLQDFSEFEPEWVEPISTTYRGWDVFELPPNGQGVAALSMLNIMENFPLKDYGHNSAAAL HVMIEAKKLAYADMARYVGDPRFGPVPVKEMLSKDLAKQRAGLISMEKASCKVLPSEIRQELDAHGHETIYMSAIDKEGN IVSLIQSNYAGYGTGMVAPGAGFSFHNRGAGFDMEPGKPNSLAGRKRPLHTIIPAFMRKGDVTVGFGIMGGWNQSQAHAQ FVANVVDFGMNVQMALESARFTKGTFDGCDLQMESRVPEAVRQELARRGHVITPVGAFATAMGNGEAVMRDAKRGVNFGA SDPRTDGAAIPQQPNVGTIK
Sequences:
>Translated_580_residues MKLLLLAMAIACVISAQDDGPATPTRTSGGTPAAAPPPAREQARSMIVTQYGIVAASQFLASQAGAKMLEQGGNAIDAAI AANAVLGLTQPYVNGMGGDLFAIVYEAKTGKVYGLNSSGWTPKALTIDYLKSKGIDKIDRTGVHTITVPGCVAGWDALRK RFGTKPFSELLASAIFYAENGFPLPEFGARSWISQPLLKQPGYAQTYLPGGKRPQLGDVFKNPALGESLRQVAAKGRDGY YKGKMAENLVSFLREQGGAHTLQDFSEFEPEWVEPISTTYRGWDVFELPPNGQGVAALSMLNIMENFPLKDYGHNSAAAL HVMIEAKKLAYADMARYVGDPRFGPVPVKEMLSKDLAKQRAGLISMEKASCKVLPSEIRQELDAHGHETIYMSAIDKEGN IVSLIQSNYAGYGTGMVAPGAGFSFHNRGAGFDMEPGKPNSLAGRKRPLHTIIPAFMRKGDVTVGFGIMGGWNQSQAHAQ FVANVVDFGMNVQMALESARFTKGTFDGCDLQMESRVPEAVRQELARRGHVITPVGAFATAMGNGEAVMRDAKRGVNFGA SDPRTDGAAIPQQPNVGTIK >Mature_580_residues MKLLLLAMAIACVISAQDDGPATPTRTSGGTPAAAPPPAREQARSMIVTQYGIVAASQFLASQAGAKMLEQGGNAIDAAI AANAVLGLTQPYVNGMGGDLFAIVYEAKTGKVYGLNSSGWTPKALTIDYLKSKGIDKIDRTGVHTITVPGCVAGWDALRK RFGTKPFSELLASAIFYAENGFPLPEFGARSWISQPLLKQPGYAQTYLPGGKRPQLGDVFKNPALGESLRQVAAKGRDGY YKGKMAENLVSFLREQGGAHTLQDFSEFEPEWVEPISTTYRGWDVFELPPNGQGVAALSMLNIMENFPLKDYGHNSAAAL HVMIEAKKLAYADMARYVGDPRFGPVPVKEMLSKDLAKQRAGLISMEKASCKVLPSEIRQELDAHGHETIYMSAIDKEGN IVSLIQSNYAGYGTGMVAPGAGFSFHNRGAGFDMEPGKPNSLAGRKRPLHTIIPAFMRKGDVTVGFGIMGGWNQSQAHAQ FVANVVDFGMNVQMALESARFTKGTFDGCDLQMESRVPEAVRQELARRGHVITPVGAFATAMGNGEAVMRDAKRGVNFGA SDPRTDGAAIPQQPNVGTIK
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI109148539, Length=596, Percent_Identity=26.1744966442953, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI73915092, Length=557, Percent_Identity=25.8527827648115, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915090, Length=557, Percent_Identity=25.8527827648115, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915096, Length=557, Percent_Identity=25.8527827648115, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915094, Length=557, Percent_Identity=25.8527827648115, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI113429324, Length=557, Percent_Identity=24.9551166965889, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI113429326, Length=558, Percent_Identity=24.5519713261649, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI153266885, Length=396, Percent_Identity=25.5050505050505, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI153266901, Length=396, Percent_Identity=25.5050505050505, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI153266907, Length=396, Percent_Identity=23.7373737373737, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1789856, Length=534, Percent_Identity=31.2734082397004, Blast_Score=228, Evalue=7e-61, Organism=Caenorhabditis elegans, GI193208245, Length=565, Percent_Identity=24.4247787610619, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI193208247, Length=567, Percent_Identity=24.1622574955908, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17506189, Length=518, Percent_Identity=25.4826254826255, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17542894, Length=522, Percent_Identity=24.5210727969349, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI212646519, Length=431, Percent_Identity=27.8422273781903, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI72000294, Length=429, Percent_Identity=27.972027972028, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI45551474, Length=552, Percent_Identity=25.5434782608696, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24642670, Length=552, Percent_Identity=25.5434782608696, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24642666, Length=552, Percent_Identity=25.5434782608696, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI161077880, Length=552, Percent_Identity=25.5434782608696, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI161077878, Length=552, Percent_Identity=25.5434782608696, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI18859893, Length=524, Percent_Identity=25.1908396946565, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI18859741, Length=507, Percent_Identity=24.4575936883629, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI161077496, Length=513, Percent_Identity=23.3918128654971, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 62112; Mature: 62112
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLLAMAIACVISAQDDGPATPTRTSGGTPAAAPPPAREQARSMIVTQYGIVAASQFL CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASQAGAKMLEQGGNAIDAAIAANAVLGLTQPYVNGMGGDLFAIVYEAKTGKVYGLNSSGW HHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEECCCEEEECCCCCC TPKALTIDYLKSKGIDKIDRTGVHTITVPGCVAGWDALRKRFGTKPFSELLASAIFYAEN CCCCEEHHHHHCCCCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GFPLPEFGARSWISQPLLKQPGYAQTYLPGGKRPQLGDVFKNPALGESLRQVAAKGRDGY CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC YKGKMAENLVSFLREQGGAHTLQDFSEFEPEWVEPISTTYRGWDVFELPPNGQGVAALSM CCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHH LNIMENFPLKDYGHNSAAALHVMIEAKKLAYADMARYVGDPRFGPVPVKEMLSKDLAKQR HHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AGLISMEKASCKVLPSEIRQELDAHGHETIYMSAIDKEGNIVSLIQSNYAGYGTGMVAPG HCCEEECCCHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC AGFSFHNRGAGFDMEPGKPNSLAGRKRPLHTIIPAFMRKGDVTVGFGIMGGWNQSQAHAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH FVANVVDFGMNVQMALESARFTKGTFDGCDLQMESRVPEAVRQELARRGHVITPVGAFAT HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHCCCEECCHHHHHH AMGNGEAVMRDAKRGVNFGASDPRTDGAAIPQQPNVGTIK HCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLLLLAMAIACVISAQDDGPATPTRTSGGTPAAAPPPAREQARSMIVTQYGIVAASQFL CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASQAGAKMLEQGGNAIDAAIAANAVLGLTQPYVNGMGGDLFAIVYEAKTGKVYGLNSSGW HHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEECCCEEEECCCCCC TPKALTIDYLKSKGIDKIDRTGVHTITVPGCVAGWDALRKRFGTKPFSELLASAIFYAEN CCCCEEHHHHHCCCCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GFPLPEFGARSWISQPLLKQPGYAQTYLPGGKRPQLGDVFKNPALGESLRQVAAKGRDGY CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC YKGKMAENLVSFLREQGGAHTLQDFSEFEPEWVEPISTTYRGWDVFELPPNGQGVAALSM CCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHH LNIMENFPLKDYGHNSAAALHVMIEAKKLAYADMARYVGDPRFGPVPVKEMLSKDLAKQR HHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AGLISMEKASCKVLPSEIRQELDAHGHETIYMSAIDKEGNIVSLIQSNYAGYGTGMVAPG HCCEEECCCHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC AGFSFHNRGAGFDMEPGKPNSLAGRKRPLHTIIPAFMRKGDVTVGFGIMGGWNQSQAHAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH FVANVVDFGMNVQMALESARFTKGTFDGCDLQMESRVPEAVRQELARRGHVITPVGAFAT HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHCCCEECCHHHHHH AMGNGEAVMRDAKRGVNFGASDPRTDGAAIPQQPNVGTIK HCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]