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The map label for this gene is 116622987

Identifier: 116622987

GI number: 116622987

Start: 4920422

End: 4921135

Strand: Reverse

Name: 116622987

Synonym: Acid_3890

Alternate gene names: NA

Gene position: 4921135-4920422 (Counterclockwise)

Preceding gene: 116622988

Following gene: 116622984

Centisome position: 49.38

GC content: 66.25

Gene sequence:

>714_bases
ATGTACTACAATCCCTGCGTGGAGATTACACGCCGCAGGCTGTTGGGGGGCGCGGCCGCGCTGGCGCTGCCCGCGGGGAT
GAAGATCGTGGTAGCCGGCGGACATCCCGGTGACCCGGAGTGCGGGTGCGCGGGGACGATCGCGCGCTACGGCGAAGTGG
GGCACGAGGTCGTTCTGCTGTATCTCAATCGCGGCGAGGGGTATTGCGGGGGCGCGGAATTGGGGCGGTGCGCCGGGATT
CGTACCAAGGAAGCGCTCGGGGCTTGCGAGATCTTGAAGGCGCGCGCGGTGTTCGCGGGGCAGTACGACGGGCGCGCGGT
GGTGGACGCCGATCACTACGACGCCTTTGCCAAGGTGCTGGCGGCGGAAAAGCCGGACGTGGTATTCACGCACTGGCCGA
TCGACCGGCATCGCGATCACCGCGCGATTTCGATGTTGACGCTGGATGCGTGGTGGCAGGGCGGCAAGACGTTCGCGCTG
TATTACTACGAAGTCGCCGAAGATACCACTATGTTCTCTCCTGCCGAGTATGTGGATATCACGGCAGTGGAAGCGCGGCG
TCGCGCGGCCTGCTACGCGCACGCGTCGCAGCAGCCCGACAAGTGGTATCCCAGGCAGGTGGAGATTACGCGGGCGCGCG
GCGCGGCCAGCGGGTTCACGCAGGCGGAGGGATTTCTGCGGCATCCGGAGAGCCGGAAGGCAGTACTGCCCTAA

Upstream 100 bases:

>100_bases
CGGTTCTATTGAGAGGGGTGGCGCGGCGTATCGGGAAGCCGCCTCAAAGGCGGCTGCAGCCAGGATTGGCTGCCCCACAA
ACAGATGCAGAGTAGTGCAG

Downstream 100 bases:

>100_bases
GGCACCGTGCTCATGTGCCCTGCGACTAGCCGCCATCCATCGGACCGCTTGTGCCACACGCGCGTGTAGCGTAGCGTGGC
CGTGACTGGGGCGCCATCCA

Product: LmbE family protein

Products: NA

Alternate protein names: Response Regulator Receiver Protein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MYYNPCVEITRRRLLGGAAALALPAGMKIVVAGGHPGDPECGCAGTIARYGEVGHEVVLLYLNRGEGYCGGAELGRCAGI
RTKEALGACEILKARAVFAGQYDGRAVVDADHYDAFAKVLAAEKPDVVFTHWPIDRHRDHRAISMLTLDAWWQGGKTFAL
YYYEVAEDTTMFSPAEYVDITAVEARRRAACYAHASQQPDKWYPRQVEITRARGAASGFTQAEGFLRHPESRKAVLP

Sequences:

>Translated_237_residues
MYYNPCVEITRRRLLGGAAALALPAGMKIVVAGGHPGDPECGCAGTIARYGEVGHEVVLLYLNRGEGYCGGAELGRCAGI
RTKEALGACEILKARAVFAGQYDGRAVVDADHYDAFAKVLAAEKPDVVFTHWPIDRHRDHRAISMLTLDAWWQGGKTFAL
YYYEVAEDTTMFSPAEYVDITAVEARRRAACYAHASQQPDKWYPRQVEITRARGAASGFTQAEGFLRHPESRKAVLP
>Mature_237_residues
MYYNPCVEITRRRLLGGAAALALPAGMKIVVAGGHPGDPECGCAGTIARYGEVGHEVVLLYLNRGEGYCGGAELGRCAGI
RTKEALGACEILKARAVFAGQYDGRAVVDADHYDAFAKVLAAEKPDVVFTHWPIDRHRDHRAISMLTLDAWWQGGKTFAL
YYYEVAEDTTMFSPAEYVDITAVEARRRAACYAHASQQPDKWYPRQVEITRARGAASGFTQAEGFLRHPESRKAVLP

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25981; Mature: 25981

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYNPCVEITRRRLLGGAAALALPAGMKIVVAGGHPGDPECGCAGTIARYGEVGHEVVLL
CCCCHHHHHHHHHHHCCHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEE
YLNRGEGYCGGAELGRCAGIRTKEALGACEILKARAVFAGQYDGRAVVDADHYDAFAKVL
EEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHH
AAEKPDVVFTHWPIDRHRDHRAISMLTLDAWWQGGKTFALYYYEVAEDTTMFSPAEYVDI
HCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHCCCCEEEEEEEEECCCCCCCCCCHHEEE
TAVEARRRAACYAHASQQPDKWYPRQVEITRARGAASGFTQAEGFLRHPESRKAVLP
EHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYYNPCVEITRRRLLGGAAALALPAGMKIVVAGGHPGDPECGCAGTIARYGEVGHEVVLL
CCCCHHHHHHHHHHHCCHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEE
YLNRGEGYCGGAELGRCAGIRTKEALGACEILKARAVFAGQYDGRAVVDADHYDAFAKVL
EEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHH
AAEKPDVVFTHWPIDRHRDHRAISMLTLDAWWQGGKTFALYYYEVAEDTTMFSPAEYVDI
HCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHCCCCEEEEEEEEECCCCCCCCCCHHEEE
TAVEARRRAACYAHASQQPDKWYPRQVEITRARGAASGFTQAEGFLRHPESRKAVLP
EHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA