| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is eutC [H]
Identifier: 116622921
GI number: 116622921
Start: 4854936
End: 4855628
Strand: Reverse
Name: eutC [H]
Synonym: Acid_3823
Alternate gene names: 116622921
Gene position: 4855628-4854936 (Counterclockwise)
Preceding gene: 116622922
Following gene: 116622920
Centisome position: 48.72
GC content: 66.96
Gene sequence:
>693_bases ATGGCTATTGACCTGAGGGCATTCACACCCGCACGCGTAGGGCTGGCCCGAAGCGGCAACAGCCTGGCGACGGAGGAGTT GCTGCGTTTTCAGTTGGACCACGCTAGGGCCCGCGACGCGGTGTACTTCGAGCTCGACCCGGCGGCGATCACGCTGCCCC ACCTGTTGGTGCGCAGCGCGGCACACGATCGGGCGACGTTTCTGCGCAGGCCGGACCTGGGGCGGACGCTCGACGAGGAG TCGCGGGCGCTTTTGGCGCGCGGTGATTACGACGCGGCCATCGTGATTGCCGACGGGCTCTCCGCTCCGGCCGTTCATCA TCACGCGGCGGCGTTGTTGGAAGTGCTGCTGCCGAAGCTCACCGGGTGGCGATTGGCGCCGCTCACGGTGGCAGTGCAGG CTCGGGTGGCGTTGGGTGATGAGATCGGCGAGGCGCTGGGCGCGCGCATGGCCGTGGTGCTGATCGGCGAGCGGCCGGGG TTGACCTCGCCGGACAGCCTGGGCATTTATCTTACGTGGGATCCGCGGCGGGGGCGCAATGACGCGCAGCGGAATTGTAT TTCCAACGTACGCACCGAGGGCATCGGTTACGAGCTCGCCGCGCACAAACTGCATTCGCTGATGGAGGCGTCGCGCGTGC GACAGCTATCGGGCGTGGCGCTCAAGGAAGACGCGAAGTCGTTACCGGGGTAA
Upstream 100 bases:
>100_bases GCTTTCACGATGCGCTCTACGTTCGCCAGCTGCTCGGACTGAGGCCGGCGCCGGAATTCGAAGCGTGGCTGGAGCGGAGG CCGGAAATTGCTGCTGCGTC
Downstream 100 bases:
>100_bases CGGGCGCGACCTCGCCAGCGCGATCGTGCGGCCCTGATCGCCGACGCCGCGGTAGAAGTGGTAGACGGTGCCTCGCCATT TCACGACCCAGGGTTTGTGC
Product: ethanolamine ammonia-lyase light chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAIDLRAFTPARVGLARSGNSLATEELLRFQLDHARARDAVYFELDPAAITLPHLLVRSAAHDRATFLRRPDLGRTLDEE SRALLARGDYDAAIVIADGLSAPAVHHHAAALLEVLLPKLTGWRLAPLTVAVQARVALGDEIGEALGARMAVVLIGERPG LTSPDSLGIYLTWDPRRGRNDAQRNCISNVRTEGIGYELAAHKLHSLMEASRVRQLSGVALKEDAKSLPG
Sequences:
>Translated_230_residues MAIDLRAFTPARVGLARSGNSLATEELLRFQLDHARARDAVYFELDPAAITLPHLLVRSAAHDRATFLRRPDLGRTLDEE SRALLARGDYDAAIVIADGLSAPAVHHHAAALLEVLLPKLTGWRLAPLTVAVQARVALGDEIGEALGARMAVVLIGERPG LTSPDSLGIYLTWDPRRGRNDAQRNCISNVRTEGIGYELAAHKLHSLMEASRVRQLSGVALKEDAKSLPG >Mature_229_residues AIDLRAFTPARVGLARSGNSLATEELLRFQLDHARARDAVYFELDPAAITLPHLLVRSAAHDRATFLRRPDLGRTLDEES RALLARGDYDAAIVIADGLSAPAVHHHAAALLEVLLPKLTGWRLAPLTVAVQARVALGDEIGEALGARMAVVLIGERPGL TSPDSLGIYLTWDPRRGRNDAQRNCISNVRTEGIGYELAAHKLHSLMEASRVRQLSGVALKEDAKSLPG
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=201, Percent_Identity=39.3034825870647, Blast_Score=117, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 24881; Mature: 24750
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDLRAFTPARVGLARSGNSLATEELLRFQLDHARARDAVYFELDPAAITLPHLLVRSA CEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH AHDRATFLRRPDLGRTLDEESRALLARGDYDAAIVIADGLSAPAVHHHAAALLEVLLPKL CHHHHHHHCCCCCCCCCCHHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH TGWRLAPLTVAVQARVALGDEIGEALGARMAVVLIGERPGLTSPDSLGIYLTWDPRRGRN CCCEECHHHHEEHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC DAQRNCISNVRTEGIGYELAAHKLHSLMEASRVRQLSGVALKEDAKSLPG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure AIDLRAFTPARVGLARSGNSLATEELLRFQLDHARARDAVYFELDPAAITLPHLLVRSA EEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH AHDRATFLRRPDLGRTLDEESRALLARGDYDAAIVIADGLSAPAVHHHAAALLEVLLPKL CHHHHHHHCCCCCCCCCCHHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH TGWRLAPLTVAVQARVALGDEIGEALGARMAVVLIGERPGLTSPDSLGIYLTWDPRRGRN CCCEECHHHHEEHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC DAQRNCISNVRTEGIGYELAAHKLHSLMEASRVRQLSGVALKEDAKSLPG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA