Click here to switch to the map view.

The map label for this gene is 116622920

Identifier: 116622920

GI number: 116622920

Start: 4854416

End: 4854682

Strand: Reverse

Name: 116622920

Synonym: Acid_3821

Alternate gene names: NA

Gene position: 4854682-4854416 (Counterclockwise)

Preceding gene: 116622921

Following gene: 116622915

Centisome position: 48.71

GC content: 61.42

Gene sequence:

>267_bases
ATGAACGTCTCGCTCACACCGGAACTGGAAAAATTCGTCGGCGCAAAAGTGAAATCCGGCCGCTACAACTCGGCGAGCGA
GGTTGTTCGGGAGGCTCTGCGTCTTCTGGAGCAACACGACTCGGCCCGAACCGCACAACTGGAGGAGTTCAATGAACAGC
TTGGCCGCCGCCTTGCCGCGCTCGATCGGCGTGAAGCAGTGGACCCTGTTGTGTCCCGAGACCGGCTGCAGCGGAAATCT
GAACAGCGCCGCCGGCTTCGCGCGTGA

Upstream 100 bases:

>100_bases
CTTGGTCCAGTGGACCAGGTCGCGCGAGGCGGCGAAGGTGTCGTGGTGGCAATATAACAGACCTTGGCAAAGGTCGGTAT
CATGAGGGCAGGAGATCACA

Downstream 100 bases:

>100_bases
GTAATTACATCCTGGGGATTGGAGCCGACCTCGATCTGGACGAGATCTGGGAATACATAGCCGCAGATAGCGTCGATGCT
GCCGAGCGCTGGCTCGCTAA

Product: CopG/Arc/MetJ family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNVSLTPELEKFVGAKVKSGRYNSASEVVREALRLLEQHDSARTAQLEEFNEQLGRRLAALDRREAVDPVVSRDRLQRKS
EQRRRLRA

Sequences:

>Translated_88_residues
MNVSLTPELEKFVGAKVKSGRYNSASEVVREALRLLEQHDSARTAQLEEFNEQLGRRLAALDRREAVDPVVSRDRLQRKS
EQRRRLRA
>Mature_88_residues
MNVSLTPELEKFVGAKVKSGRYNSASEVVREALRLLEQHDSARTAQLEEFNEQLGRRLAALDRREAVDPVVSRDRLQRKS
EQRRRLRA

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10189; Mature: 10189

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSLTPELEKFVGAKVKSGRYNSASEVVREALRLLEQHDSARTAQLEEFNEQLGRRLAA
CCCCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LDRREAVDPVVSRDRLQRKSEQRRRLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVSLTPELEKFVGAKVKSGRYNSASEVVREALRLLEQHDSARTAQLEEFNEQLGRRLAA
CCCCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LDRREAVDPVVSRDRLQRKSEQRRRLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA