| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116622877
GI number: 116622877
Start: 4798256
End: 4800679
Strand: Direct
Name: macB [H]
Synonym: Acid_3778
Alternate gene names: 116622877
Gene position: 4798256-4800679 (Clockwise)
Preceding gene: 116622875
Following gene: 116622878
Centisome position: 48.15
GC content: 65.64
Gene sequence:
>2424_bases ATGCGCAACGAAATCCGCTACGCTTTTCGTACTCTACTGCGCGACCGGGGATTCGCGCTCATGGTGGTGCTATCGCTGGC CGTTGGGATCGGGGCCAACACCGCGATTTTCTCCCTGATCAACGGAGTGCTGCTGCGGGCCCCGGATTTTCCCAATCCGG ATCGCCTGGTGACCCTCACACAGTTCGCGCCCAAGCTCGCCAAGGCCTATCCCTCGTTGCCGATGAATATCGCGATTTAC ACGGAGTGGCGTAAGCAGCTCACCACCCTCGAAAGCATCGGGATCGCACGCGCCAGCGTCTTCAACCTGACCGGCAGCGG TCAGCCGGAACAGGTCCGCGGCGCTCTTGTTTCCGCAAGCATCTTCCGCGTCTTCGGCGTACAACCGCACCTTGGCCGGG TATTCACGGACGAGGAAGACGCCGCCGGGCGCGACCACGTGGTCGTGATCGCCGATGCGCTCTGGCGCCGGCGATTCCAA GCCGACCCCGGAGTGATCGGGCGAAAGATGTTGCTCGATGGCGAGCCCTGCGAAGTGGTGGGCGTGCTGCCTGCTACCTT TCACTTTCCTCGCGAAGAAAAGGCCGGGACGCGATTTCTCGGGGAAGGGCTCGAAGTCTACCGGCCGCTGGGCTACGACG CAGGCGATCTCAAAATCCGAATGGGCGATTTCAATTATTGGGCGACGGCACGCCTCAAACCGGGCGTTTCGCCGGCCCGG GCGCAGGCCGAACTCAACGTGGTGCAGGCCGGCATCAGCAAACAGATTCCCGGCGATTTCGATTTACATGCGACGCTGAT GCCGTTGATGGAGCGAATGGTGGGAGAAGTGCGGCAGGGCCTTGTGCTCCTGATGGCGGCTGTGGGCGTCGTGCTGCTCG TGCTGTGCGTGAACCTGGCCAACCTCTCGCTGGCTCGGGCGGCGGGCAGGGCACGCGAGGCCGCCATTCGCACGGCTCTC GGGGCGAGCCGCGGGCGCCTGGTCCGGCAATCCCTGGTGGAGAGCACGCTGCTCGCGCTGATCGGCGGAGTGCTCGGTGT GACGCTGGCGTATTTCGGAGTGCACGCGCTCTTGGCGGCGGCCCCGCTGGATCTGCCGCGGCTCGACGAGGTATCGTTGG ATCTGCCGGTGCTGCTCTTCGCCCTCGCCATCTCGCTGGGGACGGGGCTATTGTTCGGCGCGCTGCCGGCCTTACGGAGC GCGCGCTCGGCGCCGTTTGAAACGCTGAAATCCGGCAGCCGCAGCAATACGGAAGGGCGCGGCGGCTTGCGCGTGCGCAA CCTGCTGGTCAGCCTGGAGGTGGGCCTGAGCGCCGCGCTGCTGGTCACGGCCGGCCTCTTGATCGCAAGCTTCGTCCGCG TGATGTCGGTGGACAAGGGCTTCAACGTGGAGCGCGTACTGGCGGTGAACGTCTCGCTGCTCTCCACGAAATATCCCAAG CCGGCTGCGCGAGCCGAGTTCTTCGACCGCTTGCTGGAGAAGGCGCGGGCGATGCCGGGTGTGCAGGATGCCGCGCTGGT CTCCGCTCTGCCGATGACGGGAGAGACGTGGATCGATATCGTGGGCATGGAACACGATCCGCGGCCTATGGTGGAGTTGC CGCCGGCCAATGTGCGCTTCATCAGTCCCGGCTACTTTCAAGCGCTGCGCGTGGGATTGCGCGATGGCCGCGACTTCGCG GAGCGCGACCGCACTAGCAAAGTAGCGATTGTATCGGCGGCCCTCGCGCAGAGGATTTGGGGCAACCAGAACCCGATCGG GCGCAAATTGCAGGACGTTGGCGCACTCCTTGAGGTGGTGGGGGTGACGCCGGATATCCGCAGCACTGGCCTGGATCAGA ACCCGGTCAACATGATCTATTTCCCTTATTGGCAGAGGCCGCAACTTGGCTCGGCGATCCTGCTGCGCTCCGCGATGGAC CCGCGCGCGCTGGCCGGTTCACTGCGCGCGGCCGTGTGGGCGATCGATGGCGAAGTCACGGTGCCGCAGGTGCGCACGCT GGAAGAAGTGATGTCGCGCTCGGTATCGCAGCGCCGCTTCCAGATGCTGCTGGTGCTGTTGTTCGCTGGTGCAGCGCTCG CGCTGGCGGCGTTCGGAACTTACGGCGTGCTCTCGTACGCGGTCACGCGGCGGACGGCGGAGATGGGTATCCGGATGGCG CTTGGCGCGGCGCAGGGCGACGTGCTGCGCATGGTGCTGCGGCAGGGAATGATGCCGGTGATGGCGGGCCTGGTGGCGGG AGGCTTGGCGGCAATCGCGGTGGGGGCGTATGTGGAGAGCCTGCTCTTCCAGGTGAGTCCGCGGGATCCGCTGGCCTTCG GCGTTTCGGCCGCGGTACTCCTGACAGTGTCGGTGGCGGCCTGCCTGATTCCGGCGCGCCGCGCCACCCGGGTCAACCCG ATCGACGCATTGCGGTTCGAATAG
Upstream 100 bases:
>100_bases CACTGGAATGGAACCATTGCTACTGTTTCGTCATCATTTGTAAACCCAATTGTCATAAATGAGGCGAACCGAATCCTGCG CCGGGACGTACTAGTCTTCG
Downstream 100 bases:
>100_bases CATTTTCAATGTGCCGTGATAGAATGCGGGTTAACCAACAAGGAGAGCTGGATGTCGTCCTTTATTCAGAACCAGTTCGA ACAGAATTTCATCACCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MRNEIRYAFRTLLRDRGFALMVVLSLAVGIGANTAIFSLINGVLLRAPDFPNPDRLVTLTQFAPKLAKAYPSLPMNIAIY TEWRKQLTTLESIGIARASVFNLTGSGQPEQVRGALVSASIFRVFGVQPHLGRVFTDEEDAAGRDHVVVIADALWRRRFQ ADPGVIGRKMLLDGEPCEVVGVLPATFHFPREEKAGTRFLGEGLEVYRPLGYDAGDLKIRMGDFNYWATARLKPGVSPAR AQAELNVVQAGISKQIPGDFDLHATLMPLMERMVGEVRQGLVLLMAAVGVVLLVLCVNLANLSLARAAGRAREAAIRTAL GASRGRLVRQSLVESTLLALIGGVLGVTLAYFGVHALLAAAPLDLPRLDEVSLDLPVLLFALAISLGTGLLFGALPALRS ARSAPFETLKSGSRSNTEGRGGLRVRNLLVSLEVGLSAALLVTAGLLIASFVRVMSVDKGFNVERVLAVNVSLLSTKYPK PAARAEFFDRLLEKARAMPGVQDAALVSALPMTGETWIDIVGMEHDPRPMVELPPANVRFISPGYFQALRVGLRDGRDFA ERDRTSKVAIVSAALAQRIWGNQNPIGRKLQDVGALLEVVGVTPDIRSTGLDQNPVNMIYFPYWQRPQLGSAILLRSAMD PRALAGSLRAAVWAIDGEVTVPQVRTLEEVMSRSVSQRRFQMLLVLLFAGAALALAAFGTYGVLSYAVTRRTAEMGIRMA LGAAQGDVLRMVLRQGMMPVMAGLVAGGLAAIAVGAYVESLLFQVSPRDPLAFGVSAAVLLTVSVAACLIPARRATRVNP IDALRFE
Sequences:
>Translated_807_residues MRNEIRYAFRTLLRDRGFALMVVLSLAVGIGANTAIFSLINGVLLRAPDFPNPDRLVTLTQFAPKLAKAYPSLPMNIAIY TEWRKQLTTLESIGIARASVFNLTGSGQPEQVRGALVSASIFRVFGVQPHLGRVFTDEEDAAGRDHVVVIADALWRRRFQ ADPGVIGRKMLLDGEPCEVVGVLPATFHFPREEKAGTRFLGEGLEVYRPLGYDAGDLKIRMGDFNYWATARLKPGVSPAR AQAELNVVQAGISKQIPGDFDLHATLMPLMERMVGEVRQGLVLLMAAVGVVLLVLCVNLANLSLARAAGRAREAAIRTAL GASRGRLVRQSLVESTLLALIGGVLGVTLAYFGVHALLAAAPLDLPRLDEVSLDLPVLLFALAISLGTGLLFGALPALRS ARSAPFETLKSGSRSNTEGRGGLRVRNLLVSLEVGLSAALLVTAGLLIASFVRVMSVDKGFNVERVLAVNVSLLSTKYPK PAARAEFFDRLLEKARAMPGVQDAALVSALPMTGETWIDIVGMEHDPRPMVELPPANVRFISPGYFQALRVGLRDGRDFA ERDRTSKVAIVSAALAQRIWGNQNPIGRKLQDVGALLEVVGVTPDIRSTGLDQNPVNMIYFPYWQRPQLGSAILLRSAMD PRALAGSLRAAVWAIDGEVTVPQVRTLEEVMSRSVSQRRFQMLLVLLFAGAALALAAFGTYGVLSYAVTRRTAEMGIRMA LGAAQGDVLRMVLRQGMMPVMAGLVAGGLAAIAVGAYVESLLFQVSPRDPLAFGVSAAVLLTVSVAACLIPARRATRVNP IDALRFE >Mature_807_residues MRNEIRYAFRTLLRDRGFALMVVLSLAVGIGANTAIFSLINGVLLRAPDFPNPDRLVTLTQFAPKLAKAYPSLPMNIAIY TEWRKQLTTLESIGIARASVFNLTGSGQPEQVRGALVSASIFRVFGVQPHLGRVFTDEEDAAGRDHVVVIADALWRRRFQ ADPGVIGRKMLLDGEPCEVVGVLPATFHFPREEKAGTRFLGEGLEVYRPLGYDAGDLKIRMGDFNYWATARLKPGVSPAR AQAELNVVQAGISKQIPGDFDLHATLMPLMERMVGEVRQGLVLLMAAVGVVLLVLCVNLANLSLARAAGRAREAAIRTAL GASRGRLVRQSLVESTLLALIGGVLGVTLAYFGVHALLAAAPLDLPRLDEVSLDLPVLLFALAISLGTGLLFGALPALRS ARSAPFETLKSGSRSNTEGRGGLRVRNLLVSLEVGLSAALLVTAGLLIASFVRVMSVDKGFNVERVLAVNVSLLSTKYPK PAARAEFFDRLLEKARAMPGVQDAALVSALPMTGETWIDIVGMEHDPRPMVELPPANVRFISPGYFQALRVGLRDGRDFA ERDRTSKVAIVSAALAQRIWGNQNPIGRKLQDVGALLEVVGVTPDIRSTGLDQNPVNMIYFPYWQRPQLGSAILLRSAMD PRALAGSLRAAVWAIDGEVTVPQVRTLEEVMSRSVSQRRFQMLLVLLFAGAALALAAFGTYGVLSYAVTRRTAEMGIRMA LGAAQGDVLRMVLRQGMMPVMAGLVAGGLAAIAVGAYVESLLFQVSPRDPLAFGVSAAVLLTVSVAACLIPARRATRVNP IDALRFE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=297, Percent_Identity=30.976430976431, Blast_Score=90, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86853; Mature: 86853
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNEIRYAFRTLLRDRGFALMVVLSLAVGIGANTAIFSLINGVLLRAPDFPNPDRLVTLT CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHH QFAPKLAKAYPSLPMNIAIYTEWRKQLTTLESIGIARASVFNLTGSGQPEQVRGALVSAS HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHEEECCCCCCHHHHHHHHHHHH IFRVFGVQPHLGRVFTDEEDAAGRDHVVVIADALWRRRFQADPGVIGRKMLLDGEPCEVV HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCEEE GVLPATFHFPREEKAGTRFLGEGLEVYRPLGYDAGDLKIRMGDFNYWATARLKPGVSPAR EECCHHCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCHHH AQAELNVVQAGISKQIPGDFDLHATLMPLMERMVGEVRQGLVLLMAAVGVVLLVLCVNLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLSLARAAGRAREAAIRTALGASRGRLVRQSLVESTLLALIGGVLGVTLAYFGVHALLAA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLDLPRLDEVSLDLPVLLFALAISLGTGLLFGALPALRSARSAPFETLKSGSRSNTEGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC GGLRVRNLLVSLEVGLSAALLVTAGLLIASFVRVMSVDKGFNVERVLAVNVSLLSTKYPK CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCC PAARAEFFDRLLEKARAMPGVQDAALVSALPMTGETWIDIVGMEHDPRPMVELPPANVRF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCEEE ISPGYFQALRVGLRDGRDFAERDRTSKVAIVSAALAQRIWGNQNPIGRKLQDVGALLEVV ECCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVTPDIRSTGLDQNPVNMIYFPYWQRPQLGSAILLRSAMDPRALAGSLRAAVWAIDGEVT CCCCCHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHEEEEECCCEE VPQVRTLEEVMSRSVSQRRFQMLLVLLFAGAALALAAFGTYGVLSYAVTRRTAEMGIRMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAQGDVLRMVLRQGMMPVMAGLVAGGLAAIAVGAYVESLLFQVSPRDPLAFGVSAAVL HCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTVSVAACLIPARRATRVNPIDALRFE HHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MRNEIRYAFRTLLRDRGFALMVVLSLAVGIGANTAIFSLINGVLLRAPDFPNPDRLVTLT CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHH QFAPKLAKAYPSLPMNIAIYTEWRKQLTTLESIGIARASVFNLTGSGQPEQVRGALVSAS HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHEEECCCCCCHHHHHHHHHHHH IFRVFGVQPHLGRVFTDEEDAAGRDHVVVIADALWRRRFQADPGVIGRKMLLDGEPCEVV HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCEEE GVLPATFHFPREEKAGTRFLGEGLEVYRPLGYDAGDLKIRMGDFNYWATARLKPGVSPAR EECCHHCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCHHH AQAELNVVQAGISKQIPGDFDLHATLMPLMERMVGEVRQGLVLLMAAVGVVLLVLCVNLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLSLARAAGRAREAAIRTALGASRGRLVRQSLVESTLLALIGGVLGVTLAYFGVHALLAA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLDLPRLDEVSLDLPVLLFALAISLGTGLLFGALPALRSARSAPFETLKSGSRSNTEGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC GGLRVRNLLVSLEVGLSAALLVTAGLLIASFVRVMSVDKGFNVERVLAVNVSLLSTKYPK CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCC PAARAEFFDRLLEKARAMPGVQDAALVSALPMTGETWIDIVGMEHDPRPMVELPPANVRF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCEEE ISPGYFQALRVGLRDGRDFAERDRTSKVAIVSAALAQRIWGNQNPIGRKLQDVGALLEVV ECCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVTPDIRSTGLDQNPVNMIYFPYWQRPQLGSAILLRSAMDPRALAGSLRAAVWAIDGEVT CCCCCHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHEEEEECCCEE VPQVRTLEEVMSRSVSQRRFQMLLVLLFAGAALALAAFGTYGVLSYAVTRRTAEMGIRMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAQGDVLRMVLRQGMMPVMAGLVAGGLAAIAVGAYVESLLFQVSPRDPLAFGVSAAVL HCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTVSVAACLIPARRATRVNPIDALRFE HHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA