| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622862
Identifier: 116622862
GI number: 116622862
Start: 4781655
End: 4783661
Strand: Direct
Name: 116622862
Synonym: Acid_3763
Alternate gene names: NA
Gene position: 4781655-4783661 (Clockwise)
Preceding gene: 116622861
Following gene: 116622870
Centisome position: 47.98
GC content: 63.73
Gene sequence:
>2007_bases ATGAAGCGGCTGTCCATTGTCTTCGTGTTGGCAATTACGGTCCTCGCGCAGCCAGCGAAAAAGGCGCCCGCTCCGCAACT GATCGAACCGGTGCAGCCCGTGCTGGCGTGGATTTTTCCGGCTGGCGGACAGCGGGGCACCACAGTCGAAATCACCGCCT CGGGGACAAGCATTGTGCCGGAAAGCGTGCTGGTGACCGGCGGCGGCGTCTCCGGCAAGGTGCTGGATGGCAGCGTCGCC GCCAGGGTCAAACTCTCGCTCACGATCGCGCCCGATGCCGCCCCTGGCGAGCGTGAACTGCGCATCCTGAATGCGGGGGG CATTTCCAACCGCTTCCGCTTTATCGTCGGCGAATTGCCGGAGATCAGGGAGATCGAGCCCAATAACGAAAAGACCACGG CGCAGAAGCTCCCGGCGCTCCCCCTGGTGGTCGATGGCCAGATTCTGGACAACGACCGCGACTACTTCCGCTTCACGGCC AAGGCCGGCGAGACGCTGGTCTTCTCGGTGCAGGCGCGCAGCCTTCTGCCATTTATCGCCGACGCGGTTCCCGGCTGGTT CGACCCGCAATTGACTGTCTACGACAAGTCGGGCAAGCAGGTTGCGTTCGCCGACGACAACCGCTTCCTGCCCGATCCGG CGATGTTCTTCAAGCCGCCCGCCGATGGCGACTACACGCTGGAACTGCGCGACATCGTTTATCGCGGCCGGGGCGATTTC GTCTACCGGATGACGATGGGCGCGCTGCCGTTCTACACCGACGTTTTCCCGCTCGGCGGGCGGCGTGGAGATGAGGTCGC GGTGGAATATCGCGGCGTCAATTTGCGTGAAACTCATGGTTCCGTGACCGTCCCGGCCGGCGCGGCGCGCACCCTGACGG TCCACGGGCTGCCGTTCGGCGCGAGCGACTACGCCGCTGTGCGCGAGGCTGAGGTCAACGATGCCTTTGAGCGCGCGCAG CGCCTGACCGCTCCGGTTGTGGTGGATGGGCGCGTGCAAAAGCCGGGAGTTTCGCATTACTTCGTGCTCACGGCGAAGAA GGACGAGAAGCTTGTGCTCGAAGTGCAGGCCCGCCGGCTCGGCTCTCCGCTTGACTCGGTGCTCACGCTTTTCGATGCAA AGCGTAACCAGGTCGCGGAGAATGACGATTGGAGCGATCCGCTGGAAGCGGCCCTGGCGCACAATGCCGATTCACGTATC CTGTACACATTCCCGGCGGCCGGCGACTACTACCTGCGCCTTCGCGACATCCAGCAAAAGGGCGGTGAGGAGTACAGCTT CCGGCTGTCGGTGGCGCCGCCGCACCCCGATTTCACTTTGCGCATTTCGCCTGACAACCCGCGCATGGGCCAAGGCGATA CCGCGGCGATCACGGTGACGGCAGTCCGGCATGACGATTTCGCAGGCGAGATCAAGCTGCGCGTCGAGAAGCTCCCGGGC GGATACCTCGCAAGCGAAGCGCTCATTCCGGCGGGGCAGAATGAAGGACGCCTCACGGTTACGTCTCCCACGGGCGCCCC GGTCGGCATTCTATCGCCGGTCGTGACCGGAATGGCAATGGTCGGGAAGGACACCGTGATGCACCGCGCGGAATCGGCCG AATCGCTGATGCAGGCCTTCGCGTACACTCACGTGCTGCCCACCAGCCAGCTCTTCCTGGCCGTAATTCCGGGTACCGGC TACACGCTCTCTTCAAACGCTCCCGAGGGCAAAGTCCTGGAGGTGAAACCGGAAAGCGAGACTCCGATCGTGATCAAAGT GCTGCGCAAGGAGAGCGTTAAGGCCGGAGTCACAATCACGGCGGTGCGGCTGGCCAACAACACGATCACCACCAAAGGCG TGTTCGTGGCGCCGGAGAAGGACGAGGCGGAGATTGTCCTCACTGTGTCGAAGGATGCGAAGGTCGGGCTGCGGCAGGAC GTGATCGTCAGCGGGCTGATGCGCGCGGGTTCGCAGAGCATCGTGCGCTTCGCCCGCGCTATCCCGATTCAAGTCGTGGC GAAGTAA
Upstream 100 bases:
>100_bases ATGGAACGCGCATCGCCTCGGCCGGCGCAGATGGCACCGTGAAAATCTGGACTCCCGCAGGCAAGCTGCTGTTCACGCTC AAGGAAGGAAGCACCCAGCC
Downstream 100 bases:
>100_bases GAGAAAAAATGCGGCCGAGCCGCTCGCCCGTAAACCTCAGCGCTGTGCGGGTGATCTGTCGGCAAGGCTCAAAGCCAGGC CCGACCCGTGGGAGCATGTA
Product: peptidase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MKRLSIVFVLAITVLAQPAKKAPAPQLIEPVQPVLAWIFPAGGQRGTTVEITASGTSIVPESVLVTGGGVSGKVLDGSVA ARVKLSLTIAPDAAPGERELRILNAGGISNRFRFIVGELPEIREIEPNNEKTTAQKLPALPLVVDGQILDNDRDYFRFTA KAGETLVFSVQARSLLPFIADAVPGWFDPQLTVYDKSGKQVAFADDNRFLPDPAMFFKPPADGDYTLELRDIVYRGRGDF VYRMTMGALPFYTDVFPLGGRRGDEVAVEYRGVNLRETHGSVTVPAGAARTLTVHGLPFGASDYAAVREAEVNDAFERAQ RLTAPVVVDGRVQKPGVSHYFVLTAKKDEKLVLEVQARRLGSPLDSVLTLFDAKRNQVAENDDWSDPLEAALAHNADSRI LYTFPAAGDYYLRLRDIQQKGGEEYSFRLSVAPPHPDFTLRISPDNPRMGQGDTAAITVTAVRHDDFAGEIKLRVEKLPG GYLASEALIPAGQNEGRLTVTSPTGAPVGILSPVVTGMAMVGKDTVMHRAESAESLMQAFAYTHVLPTSQLFLAVIPGTG YTLSSNAPEGKVLEVKPESETPIVIKVLRKESVKAGVTITAVRLANNTITTKGVFVAPEKDEAEIVLTVSKDAKVGLRQD VIVSGLMRAGSQSIVRFARAIPIQVVAK
Sequences:
>Translated_668_residues MKRLSIVFVLAITVLAQPAKKAPAPQLIEPVQPVLAWIFPAGGQRGTTVEITASGTSIVPESVLVTGGGVSGKVLDGSVA ARVKLSLTIAPDAAPGERELRILNAGGISNRFRFIVGELPEIREIEPNNEKTTAQKLPALPLVVDGQILDNDRDYFRFTA KAGETLVFSVQARSLLPFIADAVPGWFDPQLTVYDKSGKQVAFADDNRFLPDPAMFFKPPADGDYTLELRDIVYRGRGDF VYRMTMGALPFYTDVFPLGGRRGDEVAVEYRGVNLRETHGSVTVPAGAARTLTVHGLPFGASDYAAVREAEVNDAFERAQ RLTAPVVVDGRVQKPGVSHYFVLTAKKDEKLVLEVQARRLGSPLDSVLTLFDAKRNQVAENDDWSDPLEAALAHNADSRI LYTFPAAGDYYLRLRDIQQKGGEEYSFRLSVAPPHPDFTLRISPDNPRMGQGDTAAITVTAVRHDDFAGEIKLRVEKLPG GYLASEALIPAGQNEGRLTVTSPTGAPVGILSPVVTGMAMVGKDTVMHRAESAESLMQAFAYTHVLPTSQLFLAVIPGTG YTLSSNAPEGKVLEVKPESETPIVIKVLRKESVKAGVTITAVRLANNTITTKGVFVAPEKDEAEIVLTVSKDAKVGLRQD VIVSGLMRAGSQSIVRFARAIPIQVVAK >Mature_668_residues MKRLSIVFVLAITVLAQPAKKAPAPQLIEPVQPVLAWIFPAGGQRGTTVEITASGTSIVPESVLVTGGGVSGKVLDGSVA ARVKLSLTIAPDAAPGERELRILNAGGISNRFRFIVGELPEIREIEPNNEKTTAQKLPALPLVVDGQILDNDRDYFRFTA KAGETLVFSVQARSLLPFIADAVPGWFDPQLTVYDKSGKQVAFADDNRFLPDPAMFFKPPADGDYTLELRDIVYRGRGDF VYRMTMGALPFYTDVFPLGGRRGDEVAVEYRGVNLRETHGSVTVPAGAARTLTVHGLPFGASDYAAVREAEVNDAFERAQ RLTAPVVVDGRVQKPGVSHYFVLTAKKDEKLVLEVQARRLGSPLDSVLTLFDAKRNQVAENDDWSDPLEAALAHNADSRI LYTFPAAGDYYLRLRDIQQKGGEEYSFRLSVAPPHPDFTLRISPDNPRMGQGDTAAITVTAVRHDDFAGEIKLRVEKLPG GYLASEALIPAGQNEGRLTVTSPTGAPVGILSPVVTGMAMVGKDTVMHRAESAESLMQAFAYTHVLPTSQLFLAVIPGTG YTLSSNAPEGKVLEVKPESETPIVIKVLRKESVKAGVTITAVRLANNTITTKGVFVAPEKDEAEIVLTVSKDAKVGLRQD VIVSGLMRAGSQSIVRFARAIPIQVVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72056; Mature: 72056
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSIVFVLAITVLAQPAKKAPAPQLIEPVQPVLAWIFPAGGQRGTTVEITASGTSIVP CCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC ESVLVTGGGVSGKVLDGSVAARVKLSLTIAPDAAPGERELRILNAGGISNRFRFIVGELP CEEEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCC EIREIEPNNEKTTAQKLPALPLVVDGQILDNDRDYFRFTAKAGETLVFSVQARSLLPFIA CCCCCCCCCCCCHHHHCCCCCEEEECEEECCCCCEEEEEECCCCEEEEEEEHHHHHHHHH DAVPGWFDPQLTVYDKSGKQVAFADDNRFLPDPAMFFKPPADGDYTLELRDIVYRGRGDF HHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHEECCCCCCCEEEEEEEEEEECCCCE VYRMTMGALPFYTDVFPLGGRRGDEVAVEYRGVNLRETHGSVTVPAGAARTLTVHGLPFG EEEEECCCCCCHHCCCCCCCCCCCEEEEEEECCEEEECCCCEEECCCCCEEEEEECCCCC ASDYAAVREAEVNDAFERAQRLTAPVVVDGRVQKPGVSHYFVLTAKKDEKLVLEVQARRL CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEEEEEHHHC GSPLDSVLTLFDAKRNQVAENDDWSDPLEAALAHNADSRILYTFPAAGDYYLRLRDIQQK CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHC GGEEYSFRLSVAPPHPDFTLRISPDNPRMGQGDTAAITVTAVRHDDFAGEIKLRVEKLPG CCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCC GYLASEALIPAGQNEGRLTVTSPTGAPVGILSPVVTGMAMVGKDTVMHRAESAESLMQAF CEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AYTHVLPTSQLFLAVIPGTGYTLSSNAPEGKVLEVKPESETPIVIKVLRKESVKAGVTIT HHHHCCCCCCEEEEEECCCCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEE AVRLANNTITTKGVFVAPEKDEAEIVLTVSKDAKVGLRQDVIVSGLMRAGSQSIVRFARA EEEEECCEEEECEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC IPIQVVAK CCEEEEEC >Mature Secondary Structure MKRLSIVFVLAITVLAQPAKKAPAPQLIEPVQPVLAWIFPAGGQRGTTVEITASGTSIVP CCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC ESVLVTGGGVSGKVLDGSVAARVKLSLTIAPDAAPGERELRILNAGGISNRFRFIVGELP CEEEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCC EIREIEPNNEKTTAQKLPALPLVVDGQILDNDRDYFRFTAKAGETLVFSVQARSLLPFIA CCCCCCCCCCCCHHHHCCCCCEEEECEEECCCCCEEEEEECCCCEEEEEEEHHHHHHHHH DAVPGWFDPQLTVYDKSGKQVAFADDNRFLPDPAMFFKPPADGDYTLELRDIVYRGRGDF HHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHEECCCCCCCEEEEEEEEEEECCCCE VYRMTMGALPFYTDVFPLGGRRGDEVAVEYRGVNLRETHGSVTVPAGAARTLTVHGLPFG EEEEECCCCCCHHCCCCCCCCCCCEEEEEEECCEEEECCCCEEECCCCCEEEEEECCCCC ASDYAAVREAEVNDAFERAQRLTAPVVVDGRVQKPGVSHYFVLTAKKDEKLVLEVQARRL CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEEEEEHHHC GSPLDSVLTLFDAKRNQVAENDDWSDPLEAALAHNADSRILYTFPAAGDYYLRLRDIQQK CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHC GGEEYSFRLSVAPPHPDFTLRISPDNPRMGQGDTAAITVTAVRHDDFAGEIKLRVEKLPG CCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCC GYLASEALIPAGQNEGRLTVTSPTGAPVGILSPVVTGMAMVGKDTVMHRAESAESLMQAF CEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AYTHVLPTSQLFLAVIPGTGYTLSSNAPEGKVLEVKPESETPIVIKVLRKESVKAGVTIT HHHHCCCCCCEEEEEECCCCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEE AVRLANNTITTKGVFVAPEKDEAEIVLTVSKDAKVGLRQDVIVSGLMRAGSQSIVRFARA EEEEECCEEEECEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC IPIQVVAK CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA