| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622841
Identifier: 116622841
GI number: 116622841
Start: 4754098
End: 4754622
Strand: Reverse
Name: 116622841
Synonym: Acid_3741
Alternate gene names: NA
Gene position: 4754622-4754098 (Counterclockwise)
Preceding gene: 116622842
Following gene: 116622839
Centisome position: 47.71
GC content: 56.19
Gene sequence:
>525_bases ATGCACACATTCTTCAAACGAGCCCTGCCCGTAGCGGGAATATGTGCCTTGATCGCCTTCGCATCCGAAGTGCGTACGGA TTACGACCACAAAGCGAGTTTTGAGAAATACCGTACCTACTCATGGATCCAGGCCAAGGCCAGCGATTCGCTTTGGGAAA ACCGCATCATGGAAGCAGTGGACAGTCAGTTGGCCGCTCGAGGATGGACAAAGGCCGCCTCTGGTGGAGACGCCAGCGTC GCCGCGGTAGGCACAACCCGAAATGAGCCGACCTTCACCACTTTTTACGAAGGCATGCCCGGCTGGGGCTGGCGCGGCTT CGGAACCACGACCGCCACTACCTCGGTGGACTACAACCACGTGGGCACACTCGTCGTAGACGTCTTCGACTCCAACACCA AAGCTCTGATATGGCGCGGCGTAGCCAGTGATACGCTCTCGTCCAAGCCCGATAAGAACGACAAAAAACTGGATGAGGCA GTGCAAAAGATGTTCGAACACTTCCCGCCGAAATCCAAAGGCTAA
Upstream 100 bases:
>100_bases CCACTCAGAGCCGCGACCGCCAGGGAGCGATCTCTTGTATTGGTGTCGCACCCACATTGGCCGGGCGAATGCAACTGTTG GCCCCGGAGGTTCCCTACCT
Downstream 100 bases:
>100_bases CTGCTAAACCTAACCGGAATGGCAGGCCGCCACCCGCGGCCTGCCCGTCACACCACCACCTTTTTCCATCCTCCGCGCCG GAACAACGCGATGCTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MHTFFKRALPVAGICALIAFASEVRTDYDHKASFEKYRTYSWIQAKASDSLWENRIMEAVDSQLAARGWTKAASGGDASV AAVGTTRNEPTFTTFYEGMPGWGWRGFGTTTATTSVDYNHVGTLVVDVFDSNTKALIWRGVASDTLSSKPDKNDKKLDEA VQKMFEHFPPKSKG
Sequences:
>Translated_174_residues MHTFFKRALPVAGICALIAFASEVRTDYDHKASFEKYRTYSWIQAKASDSLWENRIMEAVDSQLAARGWTKAASGGDASV AAVGTTRNEPTFTTFYEGMPGWGWRGFGTTTATTSVDYNHVGTLVVDVFDSNTKALIWRGVASDTLSSKPDKNDKKLDEA VQKMFEHFPPKSKG >Mature_174_residues MHTFFKRALPVAGICALIAFASEVRTDYDHKASFEKYRTYSWIQAKASDSLWENRIMEAVDSQLAARGWTKAASGGDASV AAVGTTRNEPTFTTFYEGMPGWGWRGFGTTTATTSVDYNHVGTLVVDVFDSNTKALIWRGVASDTLSSKPDKNDKKLDEA VQKMFEHFPPKSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19229; Mature: 19229
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTFFKRALPVAGICALIAFASEVRTDYDHKASFEKYRTYSWIQAKASDSLWENRIMEAV CCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSQLAARGWTKAASGGDASVAAVGTTRNEPTFTTFYEGMPGWGWRGFGTTTATTSVDYNH HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEHEECCCCCCCCCCCCCCCEECCCCCCC VGTLVVDVFDSNTKALIWRGVASDTLSSKPDKNDKKLDEAVQKMFEHFPPKSKG CCEEEEEEECCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHTFFKRALPVAGICALIAFASEVRTDYDHKASFEKYRTYSWIQAKASDSLWENRIMEAV CCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSQLAARGWTKAASGGDASVAAVGTTRNEPTFTTFYEGMPGWGWRGFGTTTATTSVDYNH HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEHEECCCCCCCCCCCCCCCEECCCCCCC VGTLVVDVFDSNTKALIWRGVASDTLSSKPDKNDKKLDEAVQKMFEHFPPKSKG CCEEEEEEECCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA