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The map label for this gene is 116622842

Identifier: 116622842

GI number: 116622842

Start: 4754745

End: 4757093

Strand: Reverse

Name: 116622842

Synonym: Acid_3742

Alternate gene names: NA

Gene position: 4757093-4754745 (Counterclockwise)

Preceding gene: 116622843

Following gene: 116622841

Centisome position: 47.73

GC content: 64.62

Gene sequence:

>2349_bases
ATGCAAACGGGAAATGATGTTACGCGGCGCGGCTTTTTGCTGGCCGCTGGAGCCACTCCGCTGTTGCGCGGACAAGCGCA
GTCGCAATCACTGCAAAGATCCATCTGGAGCGCGAAATGGATCGGCGTTCCCAACACGCCCACCGCCGGCTATGGTGTCT
ACCACTTTCGCAAGGCCTTCGATCTCGCCTCGCGCCCCGAGCGCTTCGTAGTCCACGCCAGCGGCGACAACCGGTACCAG
CTTTACGTCAACGGCCAGCGCGTCGCCTGGGGTCCCGCGCGCGGCGATCTCTTTCACTGGCGCTATGAGACCGTGGACAT
CACCGGCTTCCTGCGCGCGGGCCGCAACATCATCGCCGCCGTCGTGTGGAACTTTGGCGAGCACGCCCCCGAAGCGCAGA
TCACCCTGCAGACGGCCTTCCTCCTGCAAGGCGATACCGCGGCCGAACGCATCATCGACACCGGCGCATCCTGGAAATGC
GCGCGCGACGAATCCTACTCGCCGGCCGTCACCACCAGCGGTGATGTTCGCGGCTACTATGTCGCCGGCCCCGGTGATCG
CATTCGCGCCGTGCAGCATCCCTGGGGCTGGGCCGCCCTGGAGTTCGACGACTCCCAATGGCCGTCGGCCGTAGTGATCG
CTCCGGCGGCGGGACGCGAAGCACGCGACGTCCACACTCGCTGGATGCTCGTCCCGCGCACTATCCCGATGATGGAAGAG
AAAGTGGAACGGCCTATGGTGGCGCGCTCCTCCCAGGGCATCGAGTGGAACGGCAAAGGCACCGCGGCCGCGGGTACCAA
GGCCACCCTGCTGCTCGATCAAAACTATCTGACTACCGCGTACCCCGAGCTCACCGTGTCCGGTGGCAAGGGCGCCATCG
TGCGCCTGCGCTACGCCGAGGCCCTCTTCACCAACTCGCGCGAGAAGGGCAATCGCAACCAAATCGAAGGCAAGAACTTC
ATCGGCAATTACGACGAGTTCACGCTCGATGGCGGCTCGCACCGAGTCTTTCGCCCCCTCTGGTGGCGGACCTTCCGTTA
TCTGCAGATCGAGATCGAGGCCCACGACGAGCCGGTCACGATCGATTCCCTGCGGGCCACGAACGTCGGCTACCCCTTCG
TGCGCCGCGCCAAATTCGATGCCGGCCAGCCCGACTTGAATCAGATCCTCGATGTAGGCTGGCACACCGCCCGGCTGTGC
GCCCACGAGACGTATATGGATTGCCCGTACTACGAGCAGCTGCAGTATGCCGGCGATACGCGCATTCAATGCCTGGTCTC
GCTCTTCCAAAGCGGCGACGCCCGCCTCATGCGCAATGCCATCGACCTGCTCAACGATTCGCGCCAGAGCGATGGCTGCA
CCATGAGCCGCTACCCCACGCGCATGGAGCAGTACATCCCGGGCTTCGCACTCTGGTGGATCGGCATGGTGCACGATTAC
TTCTGGTACGTAGACGACTCCCCGTTCGTCAAGCGCATGCTGCCTGGGGTGCGCAGCGTGCTGGCCTTCTTCGAGGGCTA
TCAGAAGGAGAACGGCTCGCTCGCTTCCCTGCCCTGGTGGCGCTATTTCGATTGGGTGCCCGAGTGGCCCAATGGCGATG
CCCCGCAGGAGGCCGATGACGGAGCCGCGCTGTTCGATCTGCAACTCCTGATGGCCTACCGCTGGGCCGCCGCGCTCGAG
AACGCGCACGGCATCGCGGAGCTCGCCGGCGTCTACGCCGCTCGCGAGCGGCAGCTCCGCGAAACCGTGCGGACTCTCTA
CTGGGATTCCGGACGCCAGCTCTTCGCCGACACTCCGGCCAAGCAGAAATTCTCGCAGCACACCAACACGCTGGCTGTCC
TGGCCAACGTGGTCGAGGGCTCCGAGGCTCGAGATCTGATGCTGCGCATCCTGACCGCACACGGACTGGCGAAGGGTGAG
ATGTACTTCAAGTTCTACATCCACCAGGCGCTGGCGAAAGTCGGCGAAGGCGACCGCTACCTCGATTTGCTCGACGATTG
GCGCGGCATGCTCGCGACCGGCCTGACTACCTTCGCCGAAGTCGTGGACCGCCCCGGCCACCCCTCGCGGTCCGACTGCC
ACGCCTGGAGCGCGAGCCCCGATATCGAAATCCTGCGCACCGTCCTTGGCGTCGATTCCGCGGCTCCCGCTTTCACTCGC
GTCCTCGTAATGCCGCACCTCGGCAAACTCAATTATGTCGATGGCAGTGTACCCACGCCGCGCGGCCCGGTCGATGTCCG
CGTCGAAGCTACCGGCAGTGTGAGCGTGACCACCCCCGTAGACGGACTCTTCGTCTGGCAGGGAACCCGCCGCGATCTCC
GAGCCGGCTCCAACGTCTTCCGCCTGTAA

Upstream 100 bases:

>100_bases
CGGCGTGGTCAGCAATATGCCGGAGTTCGCCAGGGCCTTCTCCTGCAAAGCCGGTCAGCCCATGGTGCGTCAAAACGTGT
GCCGTGTCTGGTGAATGAAA

Downstream 100 bases:

>100_bases
ACGCCTGCCCCTCTCGCGAGCCCCACTCAGAGCCGCGACCGCCAGGGAGCGATCTCTTGTATTGGTGTCGCACCCACATT
GGCCGGGCGAATGCAACTGT

Product: alpha-L-rhamnosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Alpha-L-Rhamnosidase N- Domain Protein; Alpha-Rhamnosidase; Bacterial Alpha-L-Rhamnosidase Family; Alfa-L-Rhamnosidase In L-Rhamnose Subsystem; Ricin B Lectin; Alfa-L-Rhamnosidase Homolog; Rhamnosidase B; Alpha-L-Rhamnosidase Domain-Containing Protein; Alpha-L-Rhamnosidase Domain Protein

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MQTGNDVTRRGFLLAAGATPLLRGQAQSQSLQRSIWSAKWIGVPNTPTAGYGVYHFRKAFDLASRPERFVVHASGDNRYQ
LYVNGQRVAWGPARGDLFHWRYETVDITGFLRAGRNIIAAVVWNFGEHAPEAQITLQTAFLLQGDTAAERIIDTGASWKC
ARDESYSPAVTTSGDVRGYYVAGPGDRIRAVQHPWGWAALEFDDSQWPSAVVIAPAAGREARDVHTRWMLVPRTIPMMEE
KVERPMVARSSQGIEWNGKGTAAAGTKATLLLDQNYLTTAYPELTVSGGKGAIVRLRYAEALFTNSREKGNRNQIEGKNF
IGNYDEFTLDGGSHRVFRPLWWRTFRYLQIEIEAHDEPVTIDSLRATNVGYPFVRRAKFDAGQPDLNQILDVGWHTARLC
AHETYMDCPYYEQLQYAGDTRIQCLVSLFQSGDARLMRNAIDLLNDSRQSDGCTMSRYPTRMEQYIPGFALWWIGMVHDY
FWYVDDSPFVKRMLPGVRSVLAFFEGYQKENGSLASLPWWRYFDWVPEWPNGDAPQEADDGAALFDLQLLMAYRWAAALE
NAHGIAELAGVYAARERQLRETVRTLYWDSGRQLFADTPAKQKFSQHTNTLAVLANVVEGSEARDLMLRILTAHGLAKGE
MYFKFYIHQALAKVGEGDRYLDLLDDWRGMLATGLTTFAEVVDRPGHPSRSDCHAWSASPDIEILRTVLGVDSAAPAFTR
VLVMPHLGKLNYVDGSVPTPRGPVDVRVEATGSVSVTTPVDGLFVWQGTRRDLRAGSNVFRL

Sequences:

>Translated_782_residues
MQTGNDVTRRGFLLAAGATPLLRGQAQSQSLQRSIWSAKWIGVPNTPTAGYGVYHFRKAFDLASRPERFVVHASGDNRYQ
LYVNGQRVAWGPARGDLFHWRYETVDITGFLRAGRNIIAAVVWNFGEHAPEAQITLQTAFLLQGDTAAERIIDTGASWKC
ARDESYSPAVTTSGDVRGYYVAGPGDRIRAVQHPWGWAALEFDDSQWPSAVVIAPAAGREARDVHTRWMLVPRTIPMMEE
KVERPMVARSSQGIEWNGKGTAAAGTKATLLLDQNYLTTAYPELTVSGGKGAIVRLRYAEALFTNSREKGNRNQIEGKNF
IGNYDEFTLDGGSHRVFRPLWWRTFRYLQIEIEAHDEPVTIDSLRATNVGYPFVRRAKFDAGQPDLNQILDVGWHTARLC
AHETYMDCPYYEQLQYAGDTRIQCLVSLFQSGDARLMRNAIDLLNDSRQSDGCTMSRYPTRMEQYIPGFALWWIGMVHDY
FWYVDDSPFVKRMLPGVRSVLAFFEGYQKENGSLASLPWWRYFDWVPEWPNGDAPQEADDGAALFDLQLLMAYRWAAALE
NAHGIAELAGVYAARERQLRETVRTLYWDSGRQLFADTPAKQKFSQHTNTLAVLANVVEGSEARDLMLRILTAHGLAKGE
MYFKFYIHQALAKVGEGDRYLDLLDDWRGMLATGLTTFAEVVDRPGHPSRSDCHAWSASPDIEILRTVLGVDSAAPAFTR
VLVMPHLGKLNYVDGSVPTPRGPVDVRVEATGSVSVTTPVDGLFVWQGTRRDLRAGSNVFRL
>Mature_782_residues
MQTGNDVTRRGFLLAAGATPLLRGQAQSQSLQRSIWSAKWIGVPNTPTAGYGVYHFRKAFDLASRPERFVVHASGDNRYQ
LYVNGQRVAWGPARGDLFHWRYETVDITGFLRAGRNIIAAVVWNFGEHAPEAQITLQTAFLLQGDTAAERIIDTGASWKC
ARDESYSPAVTTSGDVRGYYVAGPGDRIRAVQHPWGWAALEFDDSQWPSAVVIAPAAGREARDVHTRWMLVPRTIPMMEE
KVERPMVARSSQGIEWNGKGTAAAGTKATLLLDQNYLTTAYPELTVSGGKGAIVRLRYAEALFTNSREKGNRNQIEGKNF
IGNYDEFTLDGGSHRVFRPLWWRTFRYLQIEIEAHDEPVTIDSLRATNVGYPFVRRAKFDAGQPDLNQILDVGWHTARLC
AHETYMDCPYYEQLQYAGDTRIQCLVSLFQSGDARLMRNAIDLLNDSRQSDGCTMSRYPTRMEQYIPGFALWWIGMVHDY
FWYVDDSPFVKRMLPGVRSVLAFFEGYQKENGSLASLPWWRYFDWVPEWPNGDAPQEADDGAALFDLQLLMAYRWAAALE
NAHGIAELAGVYAARERQLRETVRTLYWDSGRQLFADTPAKQKFSQHTNTLAVLANVVEGSEARDLMLRILTAHGLAKGE
MYFKFYIHQALAKVGEGDRYLDLLDDWRGMLATGLTTFAEVVDRPGHPSRSDCHAWSASPDIEILRTVLGVDSAAPAFTR
VLVMPHLGKLNYVDGSVPTPRGPVDVRVEATGSVSVTTPVDGLFVWQGTRRDLRAGSNVFRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87820; Mature: 87820

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGNDVTRRGFLLAAGATPLLRGQAQSQSLQRSIWSAKWIGVPNTPTAGYGVYHFRKAF
CCCCCCHHHCCEEEEECCCHHHCCCHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHHHH
DLASRPERFVVHASGDNRYQLYVNGQRVAWGPARGDLFHWRYETVDITGFLRAGRNIIAA
HHCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEEEEEHHHHHCCCCEEHH
VVWNFGEHAPEAQITLQTAFLLQGDTAAERIIDTGASWKCARDESYSPAVTTSGDVRGYY
HHHHHCCCCCCCEEEEEEEEEEECCHHHHHHHHCCCCCEECCCCCCCCCEECCCCCCEEE
VAGPGDRIRAVQHPWGWAALEFDDSQWPSAVVIAPAAGREARDVHTRWMLVPRTIPMMEE
EECCCCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCHHHCCEEEEECCCCHHHHH
KVERPMVARSSQGIEWNGKGTAAAGTKATLLLDQNYLTTAYPELTVSGGKGAIVRLRYAE
HHHCCHHHCCCCCCEECCCCCCCCCCEEEEEEECCCEEECCCCEEEECCCCEEEEEEEHH
ALFTNSREKGNRNQIEGKNFIGNYDEFTLDGGSHRVFRPLWWRTFRYLQIEIEAHDEPVT
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHCEEEEEEEEEECCCCCEE
IDSLRATNVGYPFVRRAKFDAGQPDLNQILDVGWHTARLCAHETYMDCPYYEQLQYAGDT
EECEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
RIQCLVSLFQSGDARLMRNAIDLLNDSRQSDGCTMSRYPTRMEQYIPGFALWWIGMVHDY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHH
FWYVDDSPFVKRMLPGVRSVLAFFEGYQKENGSLASLPWWRYFDWVPEWPNGDAPQEADD
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCC
GAALFDLQLLMAYRWAAALENAHGIAELAGVYAARERQLRETVRTLYWDSGRQLFADTPA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
KQKFSQHTNTLAVLANVVEGSEARDLMLRILTAHGLAKGEMYFKFYIHQALAKVGEGDRY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH
LDLLDDWRGMLATGLTTFAEVVDRPGHPSRSDCHAWSASPDIEILRTVLGVDSAAPAFTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH
VLVMPHLGKLNYVDGSVPTPRGPVDVRVEATGSVSVTTPVDGLFVWQGTRRDLRAGSNVF
HHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCHHHHCCCCCC
RL
CC
>Mature Secondary Structure
MQTGNDVTRRGFLLAAGATPLLRGQAQSQSLQRSIWSAKWIGVPNTPTAGYGVYHFRKAF
CCCCCCHHHCCEEEEECCCHHHCCCHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHHHH
DLASRPERFVVHASGDNRYQLYVNGQRVAWGPARGDLFHWRYETVDITGFLRAGRNIIAA
HHCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEEEEEHHHHHCCCCEEHH
VVWNFGEHAPEAQITLQTAFLLQGDTAAERIIDTGASWKCARDESYSPAVTTSGDVRGYY
HHHHHCCCCCCCEEEEEEEEEEECCHHHHHHHHCCCCCEECCCCCCCCCEECCCCCCEEE
VAGPGDRIRAVQHPWGWAALEFDDSQWPSAVVIAPAAGREARDVHTRWMLVPRTIPMMEE
EECCCCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCHHHCCEEEEECCCCHHHHH
KVERPMVARSSQGIEWNGKGTAAAGTKATLLLDQNYLTTAYPELTVSGGKGAIVRLRYAE
HHHCCHHHCCCCCCEECCCCCCCCCCEEEEEEECCCEEECCCCEEEECCCCEEEEEEEHH
ALFTNSREKGNRNQIEGKNFIGNYDEFTLDGGSHRVFRPLWWRTFRYLQIEIEAHDEPVT
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHCEEEEEEEEEECCCCCEE
IDSLRATNVGYPFVRRAKFDAGQPDLNQILDVGWHTARLCAHETYMDCPYYEQLQYAGDT
EECEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
RIQCLVSLFQSGDARLMRNAIDLLNDSRQSDGCTMSRYPTRMEQYIPGFALWWIGMVHDY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHH
FWYVDDSPFVKRMLPGVRSVLAFFEGYQKENGSLASLPWWRYFDWVPEWPNGDAPQEADD
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCC
GAALFDLQLLMAYRWAAALENAHGIAELAGVYAARERQLRETVRTLYWDSGRQLFADTPA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
KQKFSQHTNTLAVLANVVEGSEARDLMLRILTAHGLAKGEMYFKFYIHQALAKVGEGDRY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH
LDLLDDWRGMLATGLTTFAEVVDRPGHPSRSDCHAWSASPDIEILRTVLGVDSAAPAFTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH
VLVMPHLGKLNYVDGSVPTPRGPVDVRVEATGSVSVTTPVDGLFVWQGTRRDLRAGSNVF
HHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCHHHHCCCCCC
RL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA