| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622789
Identifier: 116622789
GI number: 116622789
Start: 4681625
End: 4682830
Strand: Reverse
Name: 116622789
Synonym: Acid_3689
Alternate gene names: NA
Gene position: 4682830-4681625 (Counterclockwise)
Preceding gene: 116622791
Following gene: 116622787
Centisome position: 46.99
GC content: 66.75
Gene sequence:
>1206_bases ATGCCGGTGATGTCATCGGTCGATGCCTTGCCACGCGAGGACCGCGACGATGTTCGCGGCCATCTCGAGCAGGTATTGGC GGGGGCTCACTTCCGCCACAGCCGCCGCTGCTCGGCAATGCTCCGCTACGTGGTCGAACAGAGTTTGCGGTACCCGGGCC TGCCTATCAAGGAACGCACCATCGGCCACGCCGTCTTCGACCGCGACCTCGCCTACGACACCAATCAGGACGCGGTCGTA CGCAACGCTGCCGCCGAAGTCCGCAAGCGACTCGCGCAGCACTACCAGGAGAACGGCGCCGGACCCGGAGGACTCCGCAT TGAGTTGCCATCCGGAGCCTATGTCCCGGAATTTCGCACGCCGTCTCCAGTCCTGCCGCCGAAGAGCGCGCCGCCGCCCG CCCGTACGCGCCACCGTCCCTGGCTCTTCCTCCCGGTCGCCTTCGTCGCGGCGCTCGCCGGATGGCTCGCGGGCGTTCGC AATTCGAGCCGGCCGCCCCTCACTGAGCTCGATCAGTTCTGGGCCCCCATCCTGGCCGCGCATGCCCCGGTGCAGATCTG CGTCGGGCAAAGCCGCATGGGCTTCTACCCCGAGCGGCTCCCCGAAACTCCTGCCGACCCCGCCGCCACCATTCCCATGA GCCGCTTGATTCCCTTACGCGATCGCTTCCTGTGGATCGGCGACTCGTTCGCTATGGCCCAAATCTCGGGTTTTCTCACC GCCCGCGAAAAGCTCTACCGTCTGCGTGGATCGCAGACCACTCCCTTTGCCGAACTCCAGGGCAACCCCGTGGTCCTGAT CGGCGCCTTCAATAACGATTGGACTTTGCGCCTGACCGAAGACCTGCGATTCTCCCTGATCAACGATGGCCCGGCCACCC GCGGCGTCCGCGACCGCGGTCGCGGAACCGGCCTCGCCTGGAGCGTCAGCCGCACTCCTCAAGGCTGGATCGCCGATGAG GATTACGCGCTCGTGACCCGCCGCGCCGATCCCAGCACCGGCCAGACCGTAATCTCCGCCGGCGGTATCACCACCTATGG AACTCAGGCCGCCGGCGTTTTCCTGACTACTCCCGCGCAATTCCGCGAAGCCTTGCGCTCGGCCCCGCGCGACTGGCCGC GCAAGAACATCCAGATCGTCCTCCAGGTCAAGGTCGCCGAAAGCACCCCGGGCCCGCCGCGCGTCCTCGCCGCCTATTTC TGGTAG
Upstream 100 bases:
>100_bases CAGTCGAGGACGTCGATTTCGGCCCCTTATCTCTTTATTTCCTGGCCTTTTACGAAGCGGTGAAGTTACGCACGTACAGT ACGTCGTGAGCGGGGTTAAA
Downstream 100 bases:
>100_bases GCACGTAACGGAGCGATCCCTTCATCCCCGCCGCTCCACCACCCACACTCCCGCCAGCACCAGCCCCACCGCCGGCAGGA ACCCCGCGCCCGGCCTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPVMSSVDALPREDRDDVRGHLEQVLAGAHFRHSRRCSAMLRYVVEQSLRYPGLPIKERTIGHAVFDRDLAYDTNQDAVV RNAAAEVRKRLAQHYQENGAGPGGLRIELPSGAYVPEFRTPSPVLPPKSAPPPARTRHRPWLFLPVAFVAALAGWLAGVR NSSRPPLTELDQFWAPILAAHAPVQICVGQSRMGFYPERLPETPADPAATIPMSRLIPLRDRFLWIGDSFAMAQISGFLT AREKLYRLRGSQTTPFAELQGNPVVLIGAFNNDWTLRLTEDLRFSLINDGPATRGVRDRGRGTGLAWSVSRTPQGWIADE DYALVTRRADPSTGQTVISAGGITTYGTQAAGVFLTTPAQFREALRSAPRDWPRKNIQIVLQVKVAESTPGPPRVLAAYF W
Sequences:
>Translated_401_residues MPVMSSVDALPREDRDDVRGHLEQVLAGAHFRHSRRCSAMLRYVVEQSLRYPGLPIKERTIGHAVFDRDLAYDTNQDAVV RNAAAEVRKRLAQHYQENGAGPGGLRIELPSGAYVPEFRTPSPVLPPKSAPPPARTRHRPWLFLPVAFVAALAGWLAGVR NSSRPPLTELDQFWAPILAAHAPVQICVGQSRMGFYPERLPETPADPAATIPMSRLIPLRDRFLWIGDSFAMAQISGFLT AREKLYRLRGSQTTPFAELQGNPVVLIGAFNNDWTLRLTEDLRFSLINDGPATRGVRDRGRGTGLAWSVSRTPQGWIADE DYALVTRRADPSTGQTVISAGGITTYGTQAAGVFLTTPAQFREALRSAPRDWPRKNIQIVLQVKVAESTPGPPRVLAAYF W >Mature_400_residues PVMSSVDALPREDRDDVRGHLEQVLAGAHFRHSRRCSAMLRYVVEQSLRYPGLPIKERTIGHAVFDRDLAYDTNQDAVVR NAAAEVRKRLAQHYQENGAGPGGLRIELPSGAYVPEFRTPSPVLPPKSAPPPARTRHRPWLFLPVAFVAALAGWLAGVRN SSRPPLTELDQFWAPILAAHAPVQICVGQSRMGFYPERLPETPADPAATIPMSRLIPLRDRFLWIGDSFAMAQISGFLTA REKLYRLRGSQTTPFAELQGNPVVLIGAFNNDWTLRLTEDLRFSLINDGPATRGVRDRGRGTGLAWSVSRTPQGWIADED YALVTRRADPSTGQTVISAGGITTYGTQAAGVFLTTPAQFREALRSAPRDWPRKNIQIVLQVKVAESTPGPPRVLAAYFW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44355; Mature: 44224
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVMSSVDALPREDRDDVRGHLEQVLAGAHFRHSRRCSAMLRYVVEQSLRYPGLPIKERT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IGHAVFDRDLAYDTNQDAVVRNAAAEVRKRLAQHYQENGAGPGGLRIELPSGAYVPEFRT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC PSPVLPPKSAPPPARTRHRPWLFLPVAFVAALAGWLAGVRNSSRPPLTELDQFWAPILAA CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH HAPVQICVGQSRMGFYPERLPETPADPAATIPMSRLIPLRDRFLWIGDSFAMAQISGFLT CCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHH AREKLYRLRGSQTTPFAELQGNPVVLIGAFNNDWTLRLTEDLRFSLINDGPATRGVRDRG HHHHHHHHCCCCCCCHHEECCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCCCHHHCC RGTGLAWSVSRTPQGWIADEDYALVTRRADPSTGQTVISAGGITTYGTQAAGVFLTTPAQ CCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEECCCCCCCEEEECCHH FREALRSAPRDWPRKNIQIVLQVKVAESTPGPPRVLAAYFW HHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECC >Mature Secondary Structure PVMSSVDALPREDRDDVRGHLEQVLAGAHFRHSRRCSAMLRYVVEQSLRYPGLPIKERT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IGHAVFDRDLAYDTNQDAVVRNAAAEVRKRLAQHYQENGAGPGGLRIELPSGAYVPEFRT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC PSPVLPPKSAPPPARTRHRPWLFLPVAFVAALAGWLAGVRNSSRPPLTELDQFWAPILAA CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH HAPVQICVGQSRMGFYPERLPETPADPAATIPMSRLIPLRDRFLWIGDSFAMAQISGFLT CCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHH AREKLYRLRGSQTTPFAELQGNPVVLIGAFNNDWTLRLTEDLRFSLINDGPATRGVRDRG HHHHHHHHCCCCCCCHHEECCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCCCHHHCC RGTGLAWSVSRTPQGWIADEDYALVTRRADPSTGQTVISAGGITTYGTQAAGVFLTTPAQ CCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEECCCCCCCEEEECCHH FREALRSAPRDWPRKNIQIVLQVKVAESTPGPPRVLAAYFW HHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA