| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is camA [H]
Identifier: 116622785
GI number: 116622785
Start: 4676729
End: 4677946
Strand: Direct
Name: camA [H]
Synonym: Acid_3685
Alternate gene names: 116622785
Gene position: 4676729-4677946 (Clockwise)
Preceding gene: 116622784
Following gene: 116622786
Centisome position: 46.93
GC content: 59.77
Gene sequence:
>1218_bases ATGGCCAGCTTTAAGCACCTTATTTTAGGTGGAGGAATGGTCGCGGGCCACTGCGCCAAGCAGTACGTGGAGAACGGCGG CAAAGCCGGAGAACTCGCGATTGTGTCCGGCGACGATGCGCTGCCCTACGAGCGCCCGCCGCTCTCCAAAGGCTTTCTCG CCGGCAAAGACAGCGAGGAGTCCGTTCGGATCAACGCCGCGGAATTCTACGCCGAGCATGGAATCGACGTGAGGTTGAAT ACCCGCGTCAATTCGATCGATGCGCGCGGCGGACGTCTGTCCACAAGCTCGGGCGAAGAATTCGGTTTTGAGAAACTGAT CCTCGCCACCGGAGCGGAAGTGCGGCGGCTCGACGTGCCCGGCGCCGCTTCCAGCAATGTCCTGTACCTGCGCTCTTTGA ACGATTCGAAACGGCTACGCGACGCCTCGATAAAGGCCAAACATGCCGTGGTTGCGGGCGGCGGATTTATCGCGATGGAA GTTGCTTCCGTGCTGGCGAGCCGTGGAATCGAGACCACCATACTGGCGCGCCAAAACCGTTTCGGCGCCGCGTTTTTCAC GCCCGAGATGTCCGCATTCTTCGAAAAGTATTACGTCGATCGAGGTGTGCGAATCCTCAAACAGACCGAAGTAATGGGCA TCGAGAAGGGATCGAGAGCACTGCTGAAAGACGGGCGGGCAGTCGATTTCGATCTCTTCCTTGCGGGTATCGGAGTGCAG CCGGTGACAGTACTGGCCGAGAAAGCCGGCTTGCCGGTGGACAACGGCATTCTGGTCAACGAGTATCTCGAAACCCGTGA TGCGAACCTGTACGCCGCGGGCGACGTAGCCAACTATCCGGATTCACTGTTCGGCATGAAACGGCGGCGGGTAGAACACT GGGACAACGCCGTCTCGCAAGGCCAGTACCTGGCCGGCGCCCTGCTTGGCAAACGCGAACCGTTCGTTCACGTGCCGTAT TTCTTCTCGGATGTCTTCGACCTTTCGTACGAATTCTGGGGCGATCCCTCGCCGTCCGACCGCGTTGTGCACCGTGGCGA TCTACAAACCAGCAGCTTCAGCATCTGGTGGCTGTCACAAAACCGGCTGGTGGCCGCCTTCGCGATGAACCGTCCCGATG AGGAACGTGAACTGGCTCCGGAGCTGATTCGCTCTAGGAAGCTTCTCTCGGCCGAGCGATTACGTGAGGCAGGGTCCGTG CGTGACGCGGCCGCATGA
Upstream 100 bases:
>100_bases GTATCTCTGCGGACTGCACGGTTTCGACATTGTATCGACGGACGCAAGGCGCGCGCGGCGAACGGCGCGATGTGCCGCTC GGCGGGAGTACGATGGCACT
Downstream 100 bases:
>100_bases TGCGGGTCGCACCGCGTCAGTTATAAGATTGGCGCATGGATCTTACTGTCCACTTCCAACTGCTCGCGCGTTACAACCGT ATCGCAAACGAGCGGCTATA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MASFKHLILGGGMVAGHCAKQYVENGGKAGELAIVSGDDALPYERPPLSKGFLAGKDSEESVRINAAEFYAEHGIDVRLN TRVNSIDARGGRLSTSSGEEFGFEKLILATGAEVRRLDVPGAASSNVLYLRSLNDSKRLRDASIKAKHAVVAGGGFIAME VASVLASRGIETTILARQNRFGAAFFTPEMSAFFEKYYVDRGVRILKQTEVMGIEKGSRALLKDGRAVDFDLFLAGIGVQ PVTVLAEKAGLPVDNGILVNEYLETRDANLYAAGDVANYPDSLFGMKRRRVEHWDNAVSQGQYLAGALLGKREPFVHVPY FFSDVFDLSYEFWGDPSPSDRVVHRGDLQTSSFSIWWLSQNRLVAAFAMNRPDEERELAPELIRSRKLLSAERLREAGSV RDAAA
Sequences:
>Translated_405_residues MASFKHLILGGGMVAGHCAKQYVENGGKAGELAIVSGDDALPYERPPLSKGFLAGKDSEESVRINAAEFYAEHGIDVRLN TRVNSIDARGGRLSTSSGEEFGFEKLILATGAEVRRLDVPGAASSNVLYLRSLNDSKRLRDASIKAKHAVVAGGGFIAME VASVLASRGIETTILARQNRFGAAFFTPEMSAFFEKYYVDRGVRILKQTEVMGIEKGSRALLKDGRAVDFDLFLAGIGVQ PVTVLAEKAGLPVDNGILVNEYLETRDANLYAAGDVANYPDSLFGMKRRRVEHWDNAVSQGQYLAGALLGKREPFVHVPY FFSDVFDLSYEFWGDPSPSDRVVHRGDLQTSSFSIWWLSQNRLVAAFAMNRPDEERELAPELIRSRKLLSAERLREAGSV RDAAA >Mature_404_residues ASFKHLILGGGMVAGHCAKQYVENGGKAGELAIVSGDDALPYERPPLSKGFLAGKDSEESVRINAAEFYAEHGIDVRLNT RVNSIDARGGRLSTSSGEEFGFEKLILATGAEVRRLDVPGAASSNVLYLRSLNDSKRLRDASIKAKHAVVAGGGFIAMEV ASVLASRGIETTILARQNRFGAAFFTPEMSAFFEKYYVDRGVRILKQTEVMGIEKGSRALLKDGRAVDFDLFLAGIGVQP VTVLAEKAGLPVDNGILVNEYLETRDANLYAAGDVANYPDSLFGMKRRRVEHWDNAVSQGQYLAGALLGKREPFVHVPYF FSDVFDLSYEFWGDPSPSDRVVHRGDLQTSSFSIWWLSQNRLVAAFAMNRPDEERELAPELIRSRKLLSAERLREAGSVR DAAA
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI65787454, Length=370, Percent_Identity=26.4864864864865, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI226437568, Length=370, Percent_Identity=26.4864864864865, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI21389617, Length=370, Percent_Identity=26.4864864864865, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI4757732, Length=339, Percent_Identity=30.9734513274336, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI22202629, Length=339, Percent_Identity=30.9734513274336, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI195927004, Length=140, Percent_Identity=37.1428571428571, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI22202631, Length=140, Percent_Identity=37.1428571428571, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1788892, Length=395, Percent_Identity=29.873417721519, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1789065, Length=272, Percent_Identity=29.4117647058824, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1789765, Length=298, Percent_Identity=23.8255033557047, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17559934, Length=371, Percent_Identity=30.4582210242588, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24639257, Length=403, Percent_Identity=27.5434243176179, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI281359715, Length=403, Percent_Identity=27.5434243176179, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI281359713, Length=403, Percent_Identity=27.5434243176179, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24639250, Length=403, Percent_Identity=27.5434243176179, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI18543267, Length=403, Percent_Identity=27.5434243176179, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24639252, Length=403, Percent_Identity=27.5434243176179, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24585130, Length=388, Percent_Identity=25.2577319587629, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24581020, Length=367, Percent_Identity=27.7929155313352, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI28573993, Length=367, Percent_Identity=27.7929155313352, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 44344; Mature: 44212
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFKHLILGGGMVAGHCAKQYVENGGKAGELAIVSGDDALPYERPPLSKGFLAGKDSEE CCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC SVRINAAEFYAEHGIDVRLNTRVNSIDARGGRLSTSSGEEFGFEKLILATGAEVRRLDVP CEEEEHHHHHHHCCCEEEEECCCCEECCCCCEECCCCCCCCCHHEEEEECCCCEEEEECC GAASSNVLYLRSLNDSKRLRDASIKAKHAVVAGGGFIAMEVASVLASRGIETTILARQNR CCCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCC FGAAFFTPEMSAFFEKYYVDRGVRILKQTEVMGIEKGSRALLKDGRAVDFDLFLAGIGVQ CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEEEECCCCC PVTVLAEKAGLPVDNGILVNEYLETRDANLYAAGDVANYPDSLFGMKRRRVEHWDNAVSQ HHHHHHHHCCCCCCCCEEEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GQYLAGALLGKREPFVHVPYFFSDVFDLSYEFWGDPSPSDRVVHRGDLQTSSFSIWWLSQ CHHHHHHHHCCCCCEEECCHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCEEEEEEEC NRLVAAFAMNRPDEERELAPELIRSRKLLSAERLREAGSVRDAAA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ASFKHLILGGGMVAGHCAKQYVENGGKAGELAIVSGDDALPYERPPLSKGFLAGKDSEE CCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC SVRINAAEFYAEHGIDVRLNTRVNSIDARGGRLSTSSGEEFGFEKLILATGAEVRRLDVP CEEEEHHHHHHHCCCEEEEECCCCEECCCCCEECCCCCCCCCHHEEEEECCCCEEEEECC GAASSNVLYLRSLNDSKRLRDASIKAKHAVVAGGGFIAMEVASVLASRGIETTILARQNR CCCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCC FGAAFFTPEMSAFFEKYYVDRGVRILKQTEVMGIEKGSRALLKDGRAVDFDLFLAGIGVQ CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEEEECCCCC PVTVLAEKAGLPVDNGILVNEYLETRDANLYAAGDVANYPDSLFGMKRRRVEHWDNAVSQ HHHHHHHHCCCCCCCCEEEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GQYLAGALLGKREPFVHVPYFFSDVFDLSYEFWGDPSPSDRVVHRGDLQTSSFSIWWLSQ CHHHHHHHHCCCCCEEECCHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCEEEEEEEC NRLVAAFAMNRPDEERELAPELIRSRKLLSAERLREAGSVRDAAA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]