| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622784
Identifier: 116622784
GI number: 116622784
Start: 4675617
End: 4676132
Strand: Direct
Name: 116622784
Synonym: Acid_3683
Alternate gene names: NA
Gene position: 4675617-4676132 (Clockwise)
Preceding gene: 116622783
Following gene: 116622785
Centisome position: 46.92
GC content: 60.27
Gene sequence:
>516_bases ATGAGCGAGACGCCGGGTCATGAACGTCAGGAAGTTGTTTTCGCCGGAAAACGCATCCGGCAGTTCAGCACGTTGAGTTT CGACGAGGTGTTGGCCAAGCTGCGCGCGCGGGTCGGGGAAGCGACCATCGCCGGCGTGGTGGGGCTGCCTGGAACCCGCG AAGAGTTTGAAACAAGAATGGAAGAGTATGCCGGCGACAGCGGTTTCATGCTCTTTTCCCAGATCGATCATGGCGCCTGG ATTGAGAAATACGGCATCAAGCGCCGGCTTGTGCGCTGGATCTTAGGAAATCCGCTGATCGCGATCACGATGCTGCAACA CGACTATACCGCCGGCCTGTTCGTGCCGATTGAGCTTCTCCTCGCCGAAAACGATGGTGGCGCGGGCTGCAACATCGTTT ATGTGCTTCCGTCGTCGCTCATCGCCACCGATGCGGCGAACTCCCGGCTCGCCGCGGCAGCGATGGCGCTGGATGCCAAG CTGGAAGCGCTGGTTGCCTCAGCCGTGGCTGCATGA
Upstream 100 bases:
>100_bases GTGAGTGGGAACAATCACGAGGCGCAGCACTCGTTCCCGATCGAAAAGTTTCGGAATCCGCCGAGGCCCCCGACGCTTCT ATAGAAGCGAGGAGCGCGAT
Downstream 100 bases:
>100_bases TGCGGCGACGTCGAGTACCATCGACACGTGGTCCACGTAGCGGTCGCCAATCTTCAAGGCGCGCTGCTCGGTAGCGAAGA TTCGGAAGCTGAGAGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSETPGHERQEVVFAGKRIRQFSTLSFDEVLAKLRARVGEATIAGVVGLPGTREEFETRMEEYAGDSGFMLFSQIDHGAW IEKYGIKRRLVRWILGNPLIAITMLQHDYTAGLFVPIELLLAENDGGAGCNIVYVLPSSLIATDAANSRLAAAAMALDAK LEALVASAVAA
Sequences:
>Translated_171_residues MSETPGHERQEVVFAGKRIRQFSTLSFDEVLAKLRARVGEATIAGVVGLPGTREEFETRMEEYAGDSGFMLFSQIDHGAW IEKYGIKRRLVRWILGNPLIAITMLQHDYTAGLFVPIELLLAENDGGAGCNIVYVLPSSLIATDAANSRLAAAAMALDAK LEALVASAVAA >Mature_170_residues SETPGHERQEVVFAGKRIRQFSTLSFDEVLAKLRARVGEATIAGVVGLPGTREEFETRMEEYAGDSGFMLFSQIDHGAWI EKYGIKRRLVRWILGNPLIAITMLQHDYTAGLFVPIELLLAENDGGAGCNIVYVLPSSLIATDAANSRLAAAAMALDAKL EALVASAVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18480; Mature: 18349
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPGHERQEVVFAGKRIRQFSTLSFDEVLAKLRARVGEATIAGVVGLPGTREEFETRM CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEHEECCCCCHHHHHHHH EEYAGDSGFMLFSQIDHGAWIEKYGIKRRLVRWILGNPLIAITMLQHDYTAGLFVPIELL HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEEE LAENDGGAGCNIVYVLPSSLIATDAANSRLAAAAMALDAKLEALVASAVAA EEECCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETPGHERQEVVFAGKRIRQFSTLSFDEVLAKLRARVGEATIAGVVGLPGTREEFETRM CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEHEECCCCCHHHHHHHH EEYAGDSGFMLFSQIDHGAWIEKYGIKRRLVRWILGNPLIAITMLQHDYTAGLFVPIELL HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEEE LAENDGGAGCNIVYVLPSSLIATDAANSRLAAAAMALDAKLEALVASAVAA EEECCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA