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The map label for this gene is ybbC [H]

Identifier: 116622732

GI number: 116622732

Start: 4597157

End: 4599487

Strand: Direct

Name: ybbC [H]

Synonym: Acid_3631

Alternate gene names: 116622732

Gene position: 4597157-4599487 (Clockwise)

Preceding gene: 116622729

Following gene: 116622735

Centisome position: 46.13

GC content: 62.51

Gene sequence:

>2331_bases
ATGAAGTTTTTCTGGTGCGCCGCGCTCGCGGCGGCCGCTACCCTGTCCGCACAGACATTTTCGGGTGGTCCGGCTCTCGA
CCAGGTGATCAACCAGGCGATCGAGCAGGGCAAAATGCCGGGCGCCGTTCTACTGGTCGGGCACGATGGCAAAGTCGTGT
TTCGCAAGGCATACGGCAAGCGCGCGCTCGTGCCGCAGCCTGAGGCGATGACGGTCGATACTGTCTTCGACTGCGCGTCG
CTGACGAAGGTCATCGCCACTACGGCCTCGCTGATGAAGCTTTTCGACGAAGGCAAGTTTCGCCTCAGCGACAAGGTCAC
CGACTACATCCCCGAATTTCAAGGCGGCAAGAGCGAAATCACGCTGCGCGAGCTGCTCACCCACTTCTCCGGGCTCCAGC
CCGATGTGCCGCTCAAAGAGCCGTGGGCCGGCTATCAGACCGGCATCAAGCTGGCCACCACATTCAAGCCAGCCGACCCT
CCCGGCGTGCGGTACGTGTATAGCGATATCAATTTCATTCTGCTCGGCGAGATCGTACACCGCCTCAGCGGGCAAATGCT
CAATGAGTACGCCCGCGAAAATATCTTCCTGCCGATCGGCATGAAAGAGAGCATGTTCCAGCCGCCGGCGTCGCTGGTGC
CGCGGATCGCGCCCACCGAGCGCTGGCCGGTACGGATCGGCCCGCCGCTGCGCGGCGTGGTCCACGACCCCACCGCGCGC
AATATGGGCGGCGTCGCCGGACATGCCGGTCTCTTCTCCACGGCCGACGATCTGGCGCGCTTCGCCCAGATGATGCTCAA
CGGCGGCGAACTGGATGGCGTGCGGCTGTTCAGCCCGCTAACGGTGGACAAGTTCATCGAACCGCAGACTCCGCCCGACC
AGGCCGTGCTGCGCGGCCTCGGCTGGGATGTGGATTCGCCGCACTCCGGCAATCGCGGCGAGCTTTTCCCTATCGGCTCT
TATGGCCATACGGGCTTCACGGGCACGTCGATGTGGATCGATCCGAGCACCAAGACGTATGTCATCCTGCTCGCCAACAG
CGTGCATCCCGACCTGCGCCCCGCGCTTACGCCGCTTCGCTCCAAGGTGGCGACCGTGGTTGCGGCCAATGTCGGCATCA
CCGAACAGAAGGTGCTGTTGACGGGGTACAACGATACCATGACCGGCCCCGGCTTCCGCCGCCAGGTGGGCCGCAACGGC
TTCACGCTGACCGGGCTCGACGTGCTCGCCGCCCAGAAGTTCGCGCCGCTCGCGGGCAAACGCGTGGGCCTCATCACCAA
TCAAAGCGGTGTGGACCGGCAGGGCCGGCGCAACATCGACCTCATGAAAGCGGCCGGCATCGATGTTGCCGCCATCTTCT
CGCCGGAGCACGGCTTCTTCGGCAAAGAAGACCGGCCGGGCATCCAGGACACGGTCGATTTCAAGACCGACATCAAGGTC
TTCAGCCTTTACGGCACGACCAACCGGCCGACGCCCCGGATGTTGACCAACATCGACGCGCTGGTCTACGACATCCAGGA
CGTCGGGGTTCGCTTCTACACTTTTGAGACCACGATGGCTTACGCGCTTGAGGCCGCGGCGAAAGCAGGGATCCCTTTTT
ACGTTCTGGACCGGCCGAACCCGATTAACGGTGTGCGGGTCGAAGGCCCGATGATGGATGCCGCCAACAAAAGCTTCGTC
GGGTACCTGGCGGGCGAACCCGTGCGCCACGGGATGACGATGGGCGAACTCGCCACAATGTTCAACACCGAGAATAAACT
GGGCGCCAATCTCACCGTGATTCCAATGCAGGGCTGGCAGCGCGGCGACTGGTTCGACTACACGAACCTTTCGTGGATCA
ATCCCTCGCCCAACATGCGCAGCCTGAATGCCGCGATGTTGTATCCGGGGCTCTGTCTGATGGAGTTCCCGAAGAATTTC
TCGATGGGACGCGGCACCGATTCGCCCTTCGAGCAAGTGGGCGCCGATTTCGTCGGCGGTCGCGAATTGGCGGCGTATCT
CAACCAGCGCCAGATCCCCGGCGTACGCGCGTACCCCACCAGTTTCACTCCAACGGAATCGAACTTTAAAGGAGTGCGCA
TCGAAGGCGTGCGCTTCCAGATCACCAATCGCGATCAACTCGATGCCACACGGCTCGGCCTGGAACTCGCGGTCGCTATC
CAGAAGCTCTATCCCGGGAAGATCGATTTCAGCGCAGGAAAGCGATTGATCGGCAACGACGATGTGATCCAGCGAATCCG
GGCCGGCGAAGACCCGCGCACCATCCAGGAGTCTTACGCCGATGCCCTGGAGGCCTTCACCCAGGTCCGCGCCCGCTACC
TGCTGTATTAG

Upstream 100 bases:

>100_bases
GGGCCCGCAATTTGCTCATACGAATAAACCGTAACTCCGCGGTCAGGTTACGAGGGTTAACTTCCAATGTGGCGCAGCAC
GCCTCAGTTATGATAAATAC

Downstream 100 bases:

>100_bases
CCTTTACTTTGCTCATCGCGCGCGTGCGCTTCCACCACATGAGCGCGCCGCTAAACACCTGGATCACGGCCATCAGGGAG
GCCAACGACATCAGCGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 776; Mature: 776

Protein sequence:

>776_residues
MKFFWCAALAAAATLSAQTFSGGPALDQVINQAIEQGKMPGAVLLVGHDGKVVFRKAYGKRALVPQPEAMTVDTVFDCAS
LTKVIATTASLMKLFDEGKFRLSDKVTDYIPEFQGGKSEITLRELLTHFSGLQPDVPLKEPWAGYQTGIKLATTFKPADP
PGVRYVYSDINFILLGEIVHRLSGQMLNEYARENIFLPIGMKESMFQPPASLVPRIAPTERWPVRIGPPLRGVVHDPTAR
NMGGVAGHAGLFSTADDLARFAQMMLNGGELDGVRLFSPLTVDKFIEPQTPPDQAVLRGLGWDVDSPHSGNRGELFPIGS
YGHTGFTGTSMWIDPSTKTYVILLANSVHPDLRPALTPLRSKVATVVAANVGITEQKVLLTGYNDTMTGPGFRRQVGRNG
FTLTGLDVLAAQKFAPLAGKRVGLITNQSGVDRQGRRNIDLMKAAGIDVAAIFSPEHGFFGKEDRPGIQDTVDFKTDIKV
FSLYGTTNRPTPRMLTNIDALVYDIQDVGVRFYTFETTMAYALEAAAKAGIPFYVLDRPNPINGVRVEGPMMDAANKSFV
GYLAGEPVRHGMTMGELATMFNTENKLGANLTVIPMQGWQRGDWFDYTNLSWINPSPNMRSLNAAMLYPGLCLMEFPKNF
SMGRGTDSPFEQVGADFVGGRELAAYLNQRQIPGVRAYPTSFTPTESNFKGVRIEGVRFQITNRDQLDATRLGLELAVAI
QKLYPGKIDFSAGKRLIGNDDVIQRIRAGEDPRTIQESYADALEAFTQVRARYLLY

Sequences:

>Translated_776_residues
MKFFWCAALAAAATLSAQTFSGGPALDQVINQAIEQGKMPGAVLLVGHDGKVVFRKAYGKRALVPQPEAMTVDTVFDCAS
LTKVIATTASLMKLFDEGKFRLSDKVTDYIPEFQGGKSEITLRELLTHFSGLQPDVPLKEPWAGYQTGIKLATTFKPADP
PGVRYVYSDINFILLGEIVHRLSGQMLNEYARENIFLPIGMKESMFQPPASLVPRIAPTERWPVRIGPPLRGVVHDPTAR
NMGGVAGHAGLFSTADDLARFAQMMLNGGELDGVRLFSPLTVDKFIEPQTPPDQAVLRGLGWDVDSPHSGNRGELFPIGS
YGHTGFTGTSMWIDPSTKTYVILLANSVHPDLRPALTPLRSKVATVVAANVGITEQKVLLTGYNDTMTGPGFRRQVGRNG
FTLTGLDVLAAQKFAPLAGKRVGLITNQSGVDRQGRRNIDLMKAAGIDVAAIFSPEHGFFGKEDRPGIQDTVDFKTDIKV
FSLYGTTNRPTPRMLTNIDALVYDIQDVGVRFYTFETTMAYALEAAAKAGIPFYVLDRPNPINGVRVEGPMMDAANKSFV
GYLAGEPVRHGMTMGELATMFNTENKLGANLTVIPMQGWQRGDWFDYTNLSWINPSPNMRSLNAAMLYPGLCLMEFPKNF
SMGRGTDSPFEQVGADFVGGRELAAYLNQRQIPGVRAYPTSFTPTESNFKGVRIEGVRFQITNRDQLDATRLGLELAVAI
QKLYPGKIDFSAGKRLIGNDDVIQRIRAGEDPRTIQESYADALEAFTQVRARYLLY
>Mature_776_residues
MKFFWCAALAAAATLSAQTFSGGPALDQVINQAIEQGKMPGAVLLVGHDGKVVFRKAYGKRALVPQPEAMTVDTVFDCAS
LTKVIATTASLMKLFDEGKFRLSDKVTDYIPEFQGGKSEITLRELLTHFSGLQPDVPLKEPWAGYQTGIKLATTFKPADP
PGVRYVYSDINFILLGEIVHRLSGQMLNEYARENIFLPIGMKESMFQPPASLVPRIAPTERWPVRIGPPLRGVVHDPTAR
NMGGVAGHAGLFSTADDLARFAQMMLNGGELDGVRLFSPLTVDKFIEPQTPPDQAVLRGLGWDVDSPHSGNRGELFPIGS
YGHTGFTGTSMWIDPSTKTYVILLANSVHPDLRPALTPLRSKVATVVAANVGITEQKVLLTGYNDTMTGPGFRRQVGRNG
FTLTGLDVLAAQKFAPLAGKRVGLITNQSGVDRQGRRNIDLMKAAGIDVAAIFSPEHGFFGKEDRPGIQDTVDFKTDIKV
FSLYGTTNRPTPRMLTNIDALVYDIQDVGVRFYTFETTMAYALEAAAKAGIPFYVLDRPNPINGVRVEGPMMDAANKSFV
GYLAGEPVRHGMTMGELATMFNTENKLGANLTVIPMQGWQRGDWFDYTNLSWINPSPNMRSLNAAMLYPGLCLMEFPKNF
SMGRGTDSPFEQVGADFVGGRELAAYLNQRQIPGVRAYPTSFTPTESNFKGVRIEGVRFQITNRDQLDATRLGLELAVAI
QKLYPGKIDFSAGKRLIGNDDVIQRIRAGEDPRTIQESYADALEAFTQVRARYLLY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=359, Percent_Identity=35.3760445682451, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI1786574, Length=306, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790593, Length=307, Percent_Identity=25.0814332247557, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 85092; Mature: 85092

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFWCAALAAAATLSAQTFSGGPALDQVINQAIEQGKMPGAVLLVGHDGKVVFRKAYGK
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC
RALVPQPEAMTVDTVFDCASLTKVIATTASLMKLFDEGKFRLSDKVTDYIPEFQGGKSEI
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHCCCCCCCCCCE
TLRELLTHFSGLQPDVPLKEPWAGYQTGIKLATTFKPADPPGVRYVYSDINFILLGEIVH
EHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCEEEECCCCEEHHHHHHH
RLSGQMLNEYARENIFLPIGMKESMFQPPASLVPRIAPTERWPVRIGPPLRGVVHDPTAR
HHHHHHHHHHHHCCEEEEECCHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
NMGGVAGHAGLFSTADDLARFAQMMLNGGELDGVRLFSPLTVDKFIEPQTPPDQAVLRGL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHC
GWDVDSPHSGNRGELFPIGSYGHTGFTGTSMWIDPSTKTYVILLANSVHPDLRPALTPLR
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHH
SKVATVVAANVGITEQKVLLTGYNDTMTGPGFRRQVGRNGFTLTGLDVLAAQKFAPLAGK
HHHHHHHEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEECHHHHHHHHHCCCCCC
RVGLITNQSGVDRQGRRNIDLMKAAGIDVAAIFSPEHGFFGKEDRPGIQDTVDFKTDIKV
EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
FSLYGTTNRPTPRMLTNIDALVYDIQDVGVRFYTFETTMAYALEAAAKAGIPFYVLDRPN
EEEECCCCCCCCHHHHHHHHHEEEHHHCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCC
PINGVRVEGPMMDAANKSFVGYLAGEPVRHGMTMGELATMFNTENKLGANLTVIPMQGWQ
CCCCEEECCCCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
RGDWFDYTNLSWINPSPNMRSLNAAMLYPGLCLMEFPKNFSMGRGTDSPFEQVGADFVGG
CCCCCCCCCEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCH
RELAAYLNQRQIPGVRAYPTSFTPTESNFKGVRIEGVRFQITNRDQLDATRLGLELAVAI
HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
QKLYPGKIDFSAGKRLIGNDDVIQRIRAGEDPRTIQESYADALEAFTQVRARYLLY
HHHCCCCEECCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFFWCAALAAAATLSAQTFSGGPALDQVINQAIEQGKMPGAVLLVGHDGKVVFRKAYGK
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC
RALVPQPEAMTVDTVFDCASLTKVIATTASLMKLFDEGKFRLSDKVTDYIPEFQGGKSEI
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHCCCCCCCCCCE
TLRELLTHFSGLQPDVPLKEPWAGYQTGIKLATTFKPADPPGVRYVYSDINFILLGEIVH
EHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCEEEECCCCEEHHHHHHH
RLSGQMLNEYARENIFLPIGMKESMFQPPASLVPRIAPTERWPVRIGPPLRGVVHDPTAR
HHHHHHHHHHHHCCEEEEECCHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
NMGGVAGHAGLFSTADDLARFAQMMLNGGELDGVRLFSPLTVDKFIEPQTPPDQAVLRGL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHC
GWDVDSPHSGNRGELFPIGSYGHTGFTGTSMWIDPSTKTYVILLANSVHPDLRPALTPLR
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHH
SKVATVVAANVGITEQKVLLTGYNDTMTGPGFRRQVGRNGFTLTGLDVLAAQKFAPLAGK
HHHHHHHEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEECHHHHHHHHHCCCCCC
RVGLITNQSGVDRQGRRNIDLMKAAGIDVAAIFSPEHGFFGKEDRPGIQDTVDFKTDIKV
EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
FSLYGTTNRPTPRMLTNIDALVYDIQDVGVRFYTFETTMAYALEAAAKAGIPFYVLDRPN
EEEECCCCCCCCHHHHHHHHHEEEHHHCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCC
PINGVRVEGPMMDAANKSFVGYLAGEPVRHGMTMGELATMFNTENKLGANLTVIPMQGWQ
CCCCEEECCCCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
RGDWFDYTNLSWINPSPNMRSLNAAMLYPGLCLMEFPKNFSMGRGTDSPFEQVGADFVGG
CCCCCCCCCEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCH
RELAAYLNQRQIPGVRAYPTSFTPTESNFKGVRIEGVRFQITNRDQLDATRLGLELAVAI
HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
QKLYPGKIDFSAGKRLIGNDDVIQRIRAGEDPRTIQESYADALEAFTQVRARYLLY
HHHCCCCEECCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]