| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622714
Identifier: 116622714
GI number: 116622714
Start: 4572616
End: 4573128
Strand: Reverse
Name: 116622714
Synonym: Acid_3613
Alternate gene names: NA
Gene position: 4573128-4572616 (Counterclockwise)
Preceding gene: 116622715
Following gene: 116622712
Centisome position: 45.89
GC content: 67.64
Gene sequence:
>513_bases ATGACGCAACCGGATGCAGCCGTGGCCATCGTGCATGCACGCGGACCCGGGGAATCAGTACTATTGATCCGCCGCACCGA GCGACACGACGATCCCTGGTCCGGTCACTGGTCGTTCCCCGGCGGCCGCTGCGATCCGCAAGATCGCGACCCGCTGGCCA CGGCTTTGCGCGAATTGTACGAAGAGTGCGGCATCCGCCTGGAGCGCGAGCAGATGGAAGAAGCCCTTCCACACACCGTG GCGCGCCGACTGACGCCCCCGTACCTGTTGGTGGCGCCTTTCGTCTTCGGCGTGAACGCCGAGTTGCCGACCGTGCTCGA CCCGAGGGAGGCTGCGGCGGCACTCTGGCTTCCGCTCAGCGACCTGCGCGACCCAGCGCGTCACGATAAGCGGCCCATGC TCGGCCGTGCCCCCGAGAGCCTCTTCCCCTGCGTCGAACTCGCCGGAACTCCGCTCTGGGGCTTCACTTACCGCCTGCTC ACCGAGTGGCTCGACATCGCCCCGCGCGAGTGA
Upstream 100 bases:
>100_bases TTCCTGAACTAAGTACACGGTTTCAGAGGCTCGTGCCTTGTTGGATAGACCTGGCGCCTGCTGGCGTATTCTCTCATTTT CGACATACGATGATAGAAAG
Downstream 100 bases:
>100_bases GAAGGCCGGCGCCGGCACGGAACCCTCTCCCCTGCTGAGTTACTGGCTGCCGCCCGCGAACGCCTTGCAGTTCACGTTCG GGTGCCAGTTCACGAACGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; NTP Pyrophosphohydrolase
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTQPDAAVAIVHARGPGESVLLIRRTERHDDPWSGHWSFPGGRCDPQDRDPLATALRELYEECGIRLEREQMEEALPHTV ARRLTPPYLLVAPFVFGVNAELPTVLDPREAAAALWLPLSDLRDPARHDKRPMLGRAPESLFPCVELAGTPLWGFTYRLL TEWLDIAPRE
Sequences:
>Translated_170_residues MTQPDAAVAIVHARGPGESVLLIRRTERHDDPWSGHWSFPGGRCDPQDRDPLATALRELYEECGIRLEREQMEEALPHTV ARRLTPPYLLVAPFVFGVNAELPTVLDPREAAAALWLPLSDLRDPARHDKRPMLGRAPESLFPCVELAGTPLWGFTYRLL TEWLDIAPRE >Mature_169_residues TQPDAAVAIVHARGPGESVLLIRRTERHDDPWSGHWSFPGGRCDPQDRDPLATALRELYEECGIRLEREQMEEALPHTVA RRLTPPYLLVAPFVFGVNAELPTVLDPREAAAALWLPLSDLRDPARHDKRPMLGRAPESLFPCVELAGTPLWGFTYRLLT EWLDIAPRE
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19192; Mature: 19061
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPDAAVAIVHARGPGESVLLIRRTERHDDPWSGHWSFPGGRCDPQDRDPLATALRELY CCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH EECGIRLEREQMEEALPHTVARRLTPPYLLVAPFVFGVNAELPTVLDPREAAAALWLPLS HHHCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHH DLRDPARHDKRPMLGRAPESLFPCVELAGTPLWGFTYRLLTEWLDIAPRE HHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQPDAAVAIVHARGPGESVLLIRRTERHDDPWSGHWSFPGGRCDPQDRDPLATALRELY CCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH EECGIRLEREQMEEALPHTVARRLTPPYLLVAPFVFGVNAELPTVLDPREAAAALWLPLS HHHCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHH DLRDPARHDKRPMLGRAPESLFPCVELAGTPLWGFTYRLLTEWLDIAPRE HHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA