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The map label for this gene is dan [H]

Identifier: 116622646

GI number: 116622646

Start: 4491845

End: 4493398

Strand: Reverse

Name: dan [H]

Synonym: Acid_3545

Alternate gene names: 116622646

Gene position: 4493398-4491845 (Counterclockwise)

Preceding gene: 116622647

Following gene: 116622645

Centisome position: 45.09

GC content: 64.74

Gene sequence:

>1554_bases
ATGCGCAGAATCGCCTTCCTCCTTCTTTTGGTGTGCCCGCTGATTGCCGCCGATTTTGACGTCCTGATCCGCAATGCCCG
CGTGATCGATGGCACCGGGAACGCCTGGTACCGGGCCGATATCGCGGTGAAAGACGGCCGGATCGTCGCCATCGGCCACT
TCGAGAAGGCCACCGCGGACCGCGTGATCGACGCTCACGAGCGCATCGCCGCGCCCGGCTTCATCGACGTCCACACCCAC
ATCGAAGGCGGCGTGGAGAGGAATCCGCGCGGCGATAATTTCCTGCTCGATGGGGTCACCACGGTCATCACCGGCAACTG
CGGCAGCAGCGAGCTGAATCTCGCGGCATGGTTCGAGAAGCTCGACAAGCTCGGACTCGGACTCAACGTCGCGACCTTCG
TGGGGCACAACAGCGTGCGACGCGAAGTCATGGGGGCGGCCAACCGCCAGGCGACGCCCGAGGAAATCGCGAAGATGCAA
TCGCTGATCGATCGCGCCATGCGCGATGGCGCGGTCGGCTTCTCCACCGGCCTGGAATACGTGCCGGGCACCTATTCGAA
TACCGCCGAAGTGGTGGCGCTCGCCAAAGCCGCTGCGGCGCATGGGGGCGTGTATGCCAGCCACATGCGCGACGAAGGTT
TTCACGAGCTGGAAGCGATCACGGAGGCCGTCAACGTCGGCAAGGAAGCCGGCATGAAGGTGGAGATCTCGCATCTCAAG
ATCGACCGGCGCCGCATCTGGGGCGCCAGCGACCAATCGCTCGCGCTCATCGAAAAATTCCGCCGCGAAGGCGTGGACGT
GGTCGCCGACCAGTACCCTTACGACCGCGCCAGCACCAATCTCGGCATCCGCCTGCCTAGTTGGGCGCTGGCCGGCGGCA
AGATCAAGGAGCGTCTAGCCGACCCCGCCACGCGCCAGAAGATTGCCGCCGAGATGAAGCAGAACGTCGCCGAGATGGGC
GAGCCCAATTACGGCTTCGCCACCGTCGCGCGCTTCACCGGAAACCCGGCCTACGAAGGCAAGACAATCTCCGAGATCAA
TCAACTGAAAGGCCGCACTCCGGGAGTGGATAACGAGATCGAGACCATCTTCGAGCTGATGGAAGCGGGCGGCGCGGGCA
TGATCTACCGCCTAATGGGAGAGCAGGATATCGAGCGCATCATGCGCTACCCGTTCACCGCCGTAGCCAGCGACGGAGGC
ATCACCGAATTCGGCGTCGGCAATCCGCACCCCCGCTCCTACGGCACCAACGCGCGTGTGATCGCGGAGTACGTGCGCTC
GCGCGGCGTGCTCACGCTGGAGGATGCCGTGCGCCGCATGACTTCCCTGCCCGCCCGCACCTTCGACCTGCGCGATCGTG
GCTTGCTGCGCGAAGGGCTGGCCGCCGACCTGGTGATCTTCGACCCCGCGCGCGTGGAGGATAAATCGACCTACGTCAAG
CCGCACCAGTACAGCGCCGGCTTCGACGTGGTGATGGTGAACGGCAAAATCGTGGTGGACGACGGCAAGCTGACCGGCGC
GCGCCCAGGCCAGCCGCTGCGCCATCGCAAGTAG

Upstream 100 bases:

>100_bases
CCTTTCAGTCGCCTTCGTCTGCATTCCCGGTTTGCCGCTGCCGGCTTTCACCCGGCGTCCGCGCAAGGAGGCCGGAACCC
GCTATATTTGTCGTATCGCC

Downstream 100 bases:

>100_bases
GCGCAAACACCGGATGTTAAACTGAGGGTTCCCGCATGCCTTCGCGACCCGTCAGCCGCCCCATCGCGGCCCCTGTGCCC
GCCGCGCCTGCAGCGCCCGC

Product: D-aminoacylase domain-containing protein

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MRRIAFLLLLVCPLIAADFDVLIRNARVIDGTGNAWYRADIAVKDGRIVAIGHFEKATADRVIDAHERIAAPGFIDVHTH
IEGGVERNPRGDNFLLDGVTTVITGNCGSSELNLAAWFEKLDKLGLGLNVATFVGHNSVRREVMGAANRQATPEEIAKMQ
SLIDRAMRDGAVGFSTGLEYVPGTYSNTAEVVALAKAAAAHGGVYASHMRDEGFHELEAITEAVNVGKEAGMKVEISHLK
IDRRRIWGASDQSLALIEKFRREGVDVVADQYPYDRASTNLGIRLPSWALAGGKIKERLADPATRQKIAAEMKQNVAEMG
EPNYGFATVARFTGNPAYEGKTISEINQLKGRTPGVDNEIETIFELMEAGGAGMIYRLMGEQDIERIMRYPFTAVASDGG
ITEFGVGNPHPRSYGTNARVIAEYVRSRGVLTLEDAVRRMTSLPARTFDLRDRGLLREGLAADLVIFDPARVEDKSTYVK
PHQYSAGFDVVMVNGKIVVDDGKLTGARPGQPLRHRK

Sequences:

>Translated_517_residues
MRRIAFLLLLVCPLIAADFDVLIRNARVIDGTGNAWYRADIAVKDGRIVAIGHFEKATADRVIDAHERIAAPGFIDVHTH
IEGGVERNPRGDNFLLDGVTTVITGNCGSSELNLAAWFEKLDKLGLGLNVATFVGHNSVRREVMGAANRQATPEEIAKMQ
SLIDRAMRDGAVGFSTGLEYVPGTYSNTAEVVALAKAAAAHGGVYASHMRDEGFHELEAITEAVNVGKEAGMKVEISHLK
IDRRRIWGASDQSLALIEKFRREGVDVVADQYPYDRASTNLGIRLPSWALAGGKIKERLADPATRQKIAAEMKQNVAEMG
EPNYGFATVARFTGNPAYEGKTISEINQLKGRTPGVDNEIETIFELMEAGGAGMIYRLMGEQDIERIMRYPFTAVASDGG
ITEFGVGNPHPRSYGTNARVIAEYVRSRGVLTLEDAVRRMTSLPARTFDLRDRGLLREGLAADLVIFDPARVEDKSTYVK
PHQYSAGFDVVMVNGKIVVDDGKLTGARPGQPLRHRK
>Mature_517_residues
MRRIAFLLLLVCPLIAADFDVLIRNARVIDGTGNAWYRADIAVKDGRIVAIGHFEKATADRVIDAHERIAAPGFIDVHTH
IEGGVERNPRGDNFLLDGVTTVITGNCGSSELNLAAWFEKLDKLGLGLNVATFVGHNSVRREVMGAANRQATPEEIAKMQ
SLIDRAMRDGAVGFSTGLEYVPGTYSNTAEVVALAKAAAAHGGVYASHMRDEGFHELEAITEAVNVGKEAGMKVEISHLK
IDRRRIWGASDQSLALIEKFRREGVDVVADQYPYDRASTNLGIRLPSWALAGGKIKERLADPATRQKIAAEMKQNVAEMG
EPNYGFATVARFTGNPAYEGKTISEINQLKGRTPGVDNEIETIFELMEAGGAGMIYRLMGEQDIERIMRYPFTAVASDGG
ITEFGVGNPHPRSYGTNARVIAEYVRSRGVLTLEDAVRRMTSLPARTFDLRDRGLLREGLAADLVIFDPARVEDKSTYVK
PHQYSAGFDVVMVNGKIVVDDGKLTGARPGQPLRHRK

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 56503; Mature: 56503

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAFLLLLVCPLIAADFDVLIRNARVIDGTGNAWYRADIAVKDGRIVAIGHFEKATAD
CHHHHHHHHHHHHHHHHCHHHHHHCCEEEECCCCCEEEEEEEEECCEEEEEECCCHHHHH
RVIDAHERIAAPGFIDVHTHIEGGVERNPRGDNFLLDGVTTVITGNCGSSELNLAAWFEK
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCHHHHHHHH
LDKLGLGLNVATFVGHNSVRREVMGAANRQATPEEIAKMQSLIDRAMRDGAVGFSTGLEY
HHHHCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCC
VPGTYSNTAEVVALAKAAAAHGGVYASHMRDEGFHELEAITEAVNVGKEAGMKVEISHLK
CCCCCCCHHHHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEHEE
IDRRRIWGASDQSLALIEKFRREGVDVVADQYPYDRASTNLGIRLPSWALAGGKIKERLA
EEHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCCHHCCCCHHHHHHC
DPATRQKIAAEMKQNVAEMGEPNYGFATVARFTGNPAYEGKTISEINQLKGRTPGVDNEI
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHH
ETIFELMEAGGAGMIYRLMGEQDIERIMRYPFTAVASDGGITEFGVGNPHPRSYGTNARV
HHHHHHHHCCCCCEEEEHHCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCCCCHHH
IAEYVRSRGVLTLEDAVRRMTSLPARTFDLRDRGLLREGLAADLVIFDPARVEDKSTYVK
HHHHHHHCCCEEHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCEEEECCCCCCCCCCEEC
PHQYSAGFDVVMVNGKIVVDDGKLTGARPGQPLRHRK
CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRIAFLLLLVCPLIAADFDVLIRNARVIDGTGNAWYRADIAVKDGRIVAIGHFEKATAD
CHHHHHHHHHHHHHHHHCHHHHHHCCEEEECCCCCEEEEEEEEECCEEEEEECCCHHHHH
RVIDAHERIAAPGFIDVHTHIEGGVERNPRGDNFLLDGVTTVITGNCGSSELNLAAWFEK
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCHHHHHHHH
LDKLGLGLNVATFVGHNSVRREVMGAANRQATPEEIAKMQSLIDRAMRDGAVGFSTGLEY
HHHHCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCC
VPGTYSNTAEVVALAKAAAAHGGVYASHMRDEGFHELEAITEAVNVGKEAGMKVEISHLK
CCCCCCCHHHHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEHEE
IDRRRIWGASDQSLALIEKFRREGVDVVADQYPYDRASTNLGIRLPSWALAGGKIKERLA
EEHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCCHHCCCCHHHHHHC
DPATRQKIAAEMKQNVAEMGEPNYGFATVARFTGNPAYEGKTISEINQLKGRTPGVDNEI
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHH
ETIFELMEAGGAGMIYRLMGEQDIERIMRYPFTAVASDGGITEFGVGNPHPRSYGTNARV
HHHHHHHHCCCCCEEEEHHCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCCCCHHH
IAEYVRSRGVLTLEDAVRRMTSLPARTFDLRDRGLLREGLAADLVIFDPARVEDKSTYVK
HHHHHHHCCCEEHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCEEEECCCCCCCCCCEEC
PHQYSAGFDVVMVNGKIVVDDGKLTGARPGQPLRHRK
CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]