| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622645
Identifier: 116622645
GI number: 116622645
Start: 4490097
End: 4491809
Strand: Reverse
Name: 116622645
Synonym: Acid_3544
Alternate gene names: NA
Gene position: 4491809-4490097 (Counterclockwise)
Preceding gene: 116622646
Following gene: 116622644
Centisome position: 45.07
GC content: 65.67
Gene sequence:
>1713_bases ATGCCTTCGCGACCCGTCAGCCGCCCCATCGCGGCCCCTGTGCCCGCCGCGCCTGCAGCGCCCGCCGCTGGGCCGGCGTG GCTGAGGCCCGTGGTGTTGGTGCTGGCCGCGATTGCCCTGCTCTCGATGTTCTCCGGCGAAGTCGGCGACGCCGACACCT GGTTCCACCTGCGCACCGGCGCTTACGTGGTGCAGAGTCACAAGCTCCCCGCGCCCGATCCCTTCAGCTGGACCACCTAC ATGGGCCAACCCGCCTACCCCGGCGAAGAGACTACGCGCGACCTCAACCTCAAGCACGAGTGGGGCGCGCAGGTGATCCT TTACCTGGTCTACGCCGCCGGCGGATTTCCCGCGATGGTGATCTTCAAGGCCTGCTGCCTGACCTTCCTTTGCGGCATGA TCGGCTGGGTGGTGTACCGGCGCACCGACCGCTTCTATCTTTCGGTAGCGGCGGCGGTGGCCGCGGGCATGATCGCGCGT ACCACGGCCGCCGACCGCCCGTACCTGGTGACCTACGTTTTTCTAGCGATCACACTCTGGATCCTGGAACGCCGCCGTCC CCTGTGGGTCCTGCCGCCGCTGTTCATCCTCTGGGCGAACGCGCACGGCGGATATTTCATGGGGTGGGTGCTGCTCGGCG GGTACTGCGGCGAGGCTCTCTTCCAGCGCTTGCGCGGCCGTGCCCCGCAGGATGAGAAGACGCTGTGGGCGGCCAGCCTG CTGGCGATCCTCGCGAGCGGCCTCAATCCGACCTACTTCAACGTGATCCCCGGACTCTTCGCCTACCAGCACAGCACGCT GCAGCGCTCGCTCAAGGAGTGGCACCCCGCGTCGCTGTGGCCGCCAAGCTGGTACAGCTGTCTGCTGGTTGGCGCGGCGA TCGTGCTGCTCTGGACGTGGCGCCGCGTGCGCGTCTCGGACGTCCTGCTGTTCGCGGTCTTCGCGGCGATGTCCCTGATG GCGCAGCGCAACATCATCTTCGTCGGGATCATCGCGCCGATCGTGATCGCCAGCTACCTGCCGGAGTGGAAGCGCCCGCT GCCGCAATTCGCGGAGTTCGCCGTGCCGCTGTTGCTGCTCGTGATTGCCGGCGAAAGAATCGGGAGCGGTGAGGCATTCC AACTTCGCGCTGCGGAATGGCAGTATCCCGCGGGGCCGGTGAAGTTCCTCAAGGACCACAACGTCACCGGGCCCGTCTTC AACATCTACGAATGGGGCGGCTACCTGATGTGGGCCGGATATCCCGAGTTGAAGACCTTTGTGGATGGCCGCGCGCTCAA CGAGTCGGTCTTCCAGGACTACATGAAGATCGCGCTCAACTACCGCGACGCCCAGCCGTTGCTCGATAAATACGGCGTGC AGGTGCTGGTGCTGCAGGGTTTCGAATACTGGCGCGGCACGGTCTACATGCTGGGCGCGGCGCTCTCGGACCCGGCACAA TCCAAGTGGAAACTTGTCTACCAGGACAAAACCGCGATGGTCTTCGTGCGCCAGCCCCCGCCCGGAGTTCAACCGCTGAA GCCCGAGGAGGTCTTCACCAGCCTCGACGGGCAGTGCACGGACCACCTGCTGCACGAACCGGGAAAGCCCGGCTGCGCCG TCGGCCTCGCGGACCTTTACCGCAAGCTGGGCAGAAACGATCGCTCCACCCAATGGCTTGCCGCCTACGATCAAGTTCGC AACGGAACCTTCCATGCCACCGCGCCCCGATAA
Upstream 100 bases:
>100_bases TCGTGGTGGACGACGGCAAGCTGACCGGCGCGCGCCCAGGCCAGCCGCTGCGCCATCGCAAGTAGGCGCAAACACCGGAT GTTAAACTGAGGGTTCCCGC
Downstream 100 bases:
>100_bases GCTGAAGCCCGCCGCAACGGTGGTACAGACTCCGACACCCGCGTGGCTGCGGTCCCTGCTGCTCGCGCTTACCGCCATCC TCTTCCTGACCTGGTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MPSRPVSRPIAAPVPAAPAAPAAGPAWLRPVVLVLAAIALLSMFSGEVGDADTWFHLRTGAYVVQSHKLPAPDPFSWTTY MGQPAYPGEETTRDLNLKHEWGAQVILYLVYAAGGFPAMVIFKACCLTFLCGMIGWVVYRRTDRFYLSVAAAVAAGMIAR TTAADRPYLVTYVFLAITLWILERRRPLWVLPPLFILWANAHGGYFMGWVLLGGYCGEALFQRLRGRAPQDEKTLWAASL LAILASGLNPTYFNVIPGLFAYQHSTLQRSLKEWHPASLWPPSWYSCLLVGAAIVLLWTWRRVRVSDVLLFAVFAAMSLM AQRNIIFVGIIAPIVIASYLPEWKRPLPQFAEFAVPLLLLVIAGERIGSGEAFQLRAAEWQYPAGPVKFLKDHNVTGPVF NIYEWGGYLMWAGYPELKTFVDGRALNESVFQDYMKIALNYRDAQPLLDKYGVQVLVLQGFEYWRGTVYMLGAALSDPAQ SKWKLVYQDKTAMVFVRQPPPGVQPLKPEEVFTSLDGQCTDHLLHEPGKPGCAVGLADLYRKLGRNDRSTQWLAAYDQVR NGTFHATAPR
Sequences:
>Translated_570_residues MPSRPVSRPIAAPVPAAPAAPAAGPAWLRPVVLVLAAIALLSMFSGEVGDADTWFHLRTGAYVVQSHKLPAPDPFSWTTY MGQPAYPGEETTRDLNLKHEWGAQVILYLVYAAGGFPAMVIFKACCLTFLCGMIGWVVYRRTDRFYLSVAAAVAAGMIAR TTAADRPYLVTYVFLAITLWILERRRPLWVLPPLFILWANAHGGYFMGWVLLGGYCGEALFQRLRGRAPQDEKTLWAASL LAILASGLNPTYFNVIPGLFAYQHSTLQRSLKEWHPASLWPPSWYSCLLVGAAIVLLWTWRRVRVSDVLLFAVFAAMSLM AQRNIIFVGIIAPIVIASYLPEWKRPLPQFAEFAVPLLLLVIAGERIGSGEAFQLRAAEWQYPAGPVKFLKDHNVTGPVF NIYEWGGYLMWAGYPELKTFVDGRALNESVFQDYMKIALNYRDAQPLLDKYGVQVLVLQGFEYWRGTVYMLGAALSDPAQ SKWKLVYQDKTAMVFVRQPPPGVQPLKPEEVFTSLDGQCTDHLLHEPGKPGCAVGLADLYRKLGRNDRSTQWLAAYDQVR NGTFHATAPR >Mature_569_residues PSRPVSRPIAAPVPAAPAAPAAGPAWLRPVVLVLAAIALLSMFSGEVGDADTWFHLRTGAYVVQSHKLPAPDPFSWTTYM GQPAYPGEETTRDLNLKHEWGAQVILYLVYAAGGFPAMVIFKACCLTFLCGMIGWVVYRRTDRFYLSVAAAVAAGMIART TAADRPYLVTYVFLAITLWILERRRPLWVLPPLFILWANAHGGYFMGWVLLGGYCGEALFQRLRGRAPQDEKTLWAASLL AILASGLNPTYFNVIPGLFAYQHSTLQRSLKEWHPASLWPPSWYSCLLVGAAIVLLWTWRRVRVSDVLLFAVFAAMSLMA QRNIIFVGIIAPIVIASYLPEWKRPLPQFAEFAVPLLLLVIAGERIGSGEAFQLRAAEWQYPAGPVKFLKDHNVTGPVFN IYEWGGYLMWAGYPELKTFVDGRALNESVFQDYMKIALNYRDAQPLLDKYGVQVLVLQGFEYWRGTVYMLGAALSDPAQS KWKLVYQDKTAMVFVRQPPPGVQPLKPEEVFTSLDGQCTDHLLHEPGKPGCAVGLADLYRKLGRNDRSTQWLAAYDQVRN GTFHATAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63604; Mature: 63473
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRPVSRPIAAPVPAAPAAPAAGPAWLRPVVLVLAAIALLSMFSGEVGDADTWFHLRTG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC AYVVQSHKLPAPDPFSWTTYMGQPAYPGEETTRDLNLKHEWGAQVILYLVYAAGGFPAMV EEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH IFKACCLTFLCGMIGWVVYRRTDRFYLSVAAAVAAGMIARTTAADRPYLVTYVFLAITLW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILERRRPLWVLPPLFILWANAHGGYFMGWVLLGGYCGEALFQRLRGRAPQDEKTLWAASL HHHCCCCEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAILASGLNPTYFNVIPGLFAYQHSTLQRSLKEWHPASLWPPSWYSCLLVGAAIVLLWTW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RRVRVSDVLLFAVFAAMSLMAQRNIIFVGIIAPIVIASYLPEWKRPLPQFAEFAVPLLLL HHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH VIAGERIGSGEAFQLRAAEWQYPAGPVKFLKDHNVTGPVFNIYEWGGYLMWAGYPELKTF HHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHH VDGRALNESVFQDYMKIALNYRDAQPLLDKYGVQVLVLQGFEYWRGTVYMLGAALSDPAQ HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECHHHHCCHHHEEEHHHCCCCC SKWKLVYQDKTAMVFVRQPPPGVQPLKPEEVFTSLDGQCTDHLLHEPGKPGCAVGLADLY CCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHH RKLGRNDRSTQWLAAYDQVRNGTFHATAPR HHHCCCCCCCHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure PSRPVSRPIAAPVPAAPAAPAAGPAWLRPVVLVLAAIALLSMFSGEVGDADTWFHLRTG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC AYVVQSHKLPAPDPFSWTTYMGQPAYPGEETTRDLNLKHEWGAQVILYLVYAAGGFPAMV EEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH IFKACCLTFLCGMIGWVVYRRTDRFYLSVAAAVAAGMIARTTAADRPYLVTYVFLAITLW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILERRRPLWVLPPLFILWANAHGGYFMGWVLLGGYCGEALFQRLRGRAPQDEKTLWAASL HHHCCCCEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAILASGLNPTYFNVIPGLFAYQHSTLQRSLKEWHPASLWPPSWYSCLLVGAAIVLLWTW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RRVRVSDVLLFAVFAAMSLMAQRNIIFVGIIAPIVIASYLPEWKRPLPQFAEFAVPLLLL HHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH VIAGERIGSGEAFQLRAAEWQYPAGPVKFLKDHNVTGPVFNIYEWGGYLMWAGYPELKTF HHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHH VDGRALNESVFQDYMKIALNYRDAQPLLDKYGVQVLVLQGFEYWRGTVYMLGAALSDPAQ HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECHHHHCCHHHEEEHHHCCCCC SKWKLVYQDKTAMVFVRQPPPGVQPLKPEEVFTSLDGQCTDHLLHEPGKPGCAVGLADLY CCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHH RKLGRNDRSTQWLAAYDQVRNGTFHATAPR HHHCCCCCCCHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA