| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622640
Identifier: 116622640
GI number: 116622640
Start: 4485133
End: 4486005
Strand: Direct
Name: 116622640
Synonym: Acid_3539
Alternate gene names: NA
Gene position: 4485133-4486005 (Clockwise)
Preceding gene: 116622639
Following gene: 116622648
Centisome position: 45.01
GC content: 64.38
Gene sequence:
>873_bases ATGGCGAACCTGTCGAGAATCCTGGTGCCGGTGGAGTTTTCGCCGCGCTGCCGGGGCGCGGCACAGTATGCCGAAGCCCT GGCTTGTCACTTCAAGGGTGAAATCATCTTGCTGCACGTCGTGCTGCCACCGCTGGCGAACTATAGCTCGTTTGAAGCTA TGGCCTATTCCAGCGCGGTTGATCTTGCGGAGGAGGTCGCCAGGCAGCGGCGGGTGGAGCTTGCGGGCTTCCCCTGCAAA GCGCCCGGTGGAGTGCGCAACATGGTAGCGATCGGCGACCCGGCGCAGGTGATCTGTGAAATCGCCCGCGACGAACGGTG CGACCTGATCGTGATGCCGACGCACGGCTACGGACCGTTCCGCCGCTTCCTGCTCGGCTCGGTGACGGCCAAGGTGCTGC ACGATGCGGTCTGCCCGGTGTGTACCAGCCCGCACATGGAGATGGCGCCGGAGAGCACATCCTTCGGGTTCCATCAGGTG CTCTGCGCGATCGACCTGGCGCTGCACAGCCGCGAGGTGCTGGCATGGGCGGACTGGTTCGCGCGCGAGTACGCCGCGGC GCTCACCATCGTGCACGCGATTCCTTCGGCGGCAACGCGGCGCGGCGGCTTTTACTTCGATCCGGATTTCGGGGTCGAGT TGACGCGGCACGCTTCAGAGCGCATCGAACTGCTGAAGGAAGACTTGAACATTAAGGCCGCGGTGGATATCGAGGGCGGG GAAACGCCGCTAGTGGTGGCGAATGCCGCCGAGAGCCTCAAAGCGAGCGTCCTGATTATCGGCCGGGGCAGCACTCCGCG CGCTCATGGACACCTGCCGACGAACGCGTACGCGATTGTACGCGAGTCGCCATGTCCCGTGTTCACGATCTGA
Upstream 100 bases:
>100_bases ATCGACGACCTGGGCTACGCACCTTGACCCTGCTCGTTCTGGCGTTGGGTGTGTTCGTGGTGCGCGCAACCTGACTGCCT ACCCCGCGAGGAGGTGCCTT
Downstream 100 bases:
>100_bases GGGAAGGCTAAATCGTGCCGGAGTGGCGCTTGAAGATTTGAAGCAGGTTCTGAGATAGCGCGGAGCGGGCCATCACCATA TCGCATCCGGCTTCCTGCGC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Family Protein; Universal Stress Protein Family Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MANLSRILVPVEFSPRCRGAAQYAEALACHFKGEIILLHVVLPPLANYSSFEAMAYSSAVDLAEEVARQRRVELAGFPCK APGGVRNMVAIGDPAQVICEIARDERCDLIVMPTHGYGPFRRFLLGSVTAKVLHDAVCPVCTSPHMEMAPESTSFGFHQV LCAIDLALHSREVLAWADWFAREYAAALTIVHAIPSAATRRGGFYFDPDFGVELTRHASERIELLKEDLNIKAAVDIEGG ETPLVVANAAESLKASVLIIGRGSTPRAHGHLPTNAYAIVRESPCPVFTI
Sequences:
>Translated_290_residues MANLSRILVPVEFSPRCRGAAQYAEALACHFKGEIILLHVVLPPLANYSSFEAMAYSSAVDLAEEVARQRRVELAGFPCK APGGVRNMVAIGDPAQVICEIARDERCDLIVMPTHGYGPFRRFLLGSVTAKVLHDAVCPVCTSPHMEMAPESTSFGFHQV LCAIDLALHSREVLAWADWFAREYAAALTIVHAIPSAATRRGGFYFDPDFGVELTRHASERIELLKEDLNIKAAVDIEGG ETPLVVANAAESLKASVLIIGRGSTPRAHGHLPTNAYAIVRESPCPVFTI >Mature_289_residues ANLSRILVPVEFSPRCRGAAQYAEALACHFKGEIILLHVVLPPLANYSSFEAMAYSSAVDLAEEVARQRRVELAGFPCKA PGGVRNMVAIGDPAQVICEIARDERCDLIVMPTHGYGPFRRFLLGSVTAKVLHDAVCPVCTSPHMEMAPESTSFGFHQVL CAIDLALHSREVLAWADWFAREYAAALTIVHAIPSAATRRGGFYFDPDFGVELTRHASERIELLKEDLNIKAAVDIEGGE TPLVVANAAESLKASVLIIGRGSTPRAHGHLPTNAYAIVRESPCPVFTI
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31461; Mature: 31329
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLSRILVPVEFSPRCRGAAQYAEALACHFKGEIILLHVVLPPLANYSSFEAMAYSSAV CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH DLAEEVARQRRVELAGFPCKAPGGVRNMVAIGDPAQVICEIARDERCDLIVMPTHGYGPF HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHH RRFLLGSVTAKVLHDAVCPVCTSPHMEMAPESTSFGFHQVLCAIDLALHSREVLAWADWF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AREYAAALTIVHAIPSAATRRGGFYFDPDFGVELTRHASERIELLKEDLNIKAAVDIEGG HHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC ETPLVVANAAESLKASVLIIGRGSTPRAHGHLPTNAYAIVRESPCPVFTI CCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEC >Mature Secondary Structure ANLSRILVPVEFSPRCRGAAQYAEALACHFKGEIILLHVVLPPLANYSSFEAMAYSSAV CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH DLAEEVARQRRVELAGFPCKAPGGVRNMVAIGDPAQVICEIARDERCDLIVMPTHGYGPF HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHH RRFLLGSVTAKVLHDAVCPVCTSPHMEMAPESTSFGFHQVLCAIDLALHSREVLAWADWF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AREYAAALTIVHAIPSAATRRGGFYFDPDFGVELTRHASERIELLKEDLNIKAAVDIEGG HHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC ETPLVVANAAESLKASVLIIGRGSTPRAHGHLPTNAYAIVRESPCPVFTI CCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA