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The map label for this gene is ykfC [C]

Identifier: 116622573

GI number: 116622573

Start: 4391146

End: 4391493

Strand: Direct

Name: ykfC [C]

Synonym: Acid_3471

Alternate gene names: 116622573

Gene position: 4391146-4391493 (Clockwise)

Preceding gene: 116622572

Following gene: 116622575

Centisome position: 44.06

GC content: 58.91

Gene sequence:

>348_bases
ATGTACGAGAACCTGATGGAAGAGGTAGTCAGCCCGGAGAATTATGGGAAGGCGTTGAAGGCGGTAGTGGCCAACGACGG
CTCGCCTGGGGTGGACGGGATGACGACGAAACAGCTAAGCGGGCACCTCATGGAGCACTGGGGGAAGGTCCAGGCGAAGC
TGAAGAGAGGGAGCTATATACCGAGCCCTGTGAAGCGGAAGGAAATCCGCAAAGAGAACGGGGGCGGGATGAGGAAGTTA
GGCATCCCGACGGTACTGGGAGCGGAAGTTTCTGGGGTTCCGACTGAACCGTTCGCGGCAGATCGAAGCAGCACCGGAGA
GGCGGAGTTGCCAGAGTCTGACGAGTAA

Upstream 100 bases:

>100_bases
ACGGCGTTGGGCGCGGACGAAGGTTCGATCCTGGCGCTAGGGAGCGACCGGAAGGGAAGCTGCTCGGGGAGTGCAAGGCA
GAAGCGGTGGAACCGCGGCG

Downstream 100 bases:

>100_bases
CCAACTACGGAACAACTGGCGGCAATTTATACGAGGCTGGTGGGTACTACCGACTAGCGGAAAACCGTCGATCGATCACG
CGGCTGGAGGGATGGATCCG

Product: maturase-like protein

Products: NA

Alternate protein names: Group II Intron-Encoding Maturase; GBSi1 Group II Intron Maturase; Maturase; Reverse Transcriptase/Maturase Group FT II Introns; Recombinase; Group II Intron-Encoded Protein LtrA; Reverse Transcriptase Family Protein; Transposase; Maturase-Like Protein; Retron-Type Reverse Transcriptase; Retron-Type Reverse Transcriptase-Like Protein; Ecombinase For Bh.Int; Group II Intron-Encoded Maturase; Integron/Retron-Type RNA-Directed DNA Polymerase; Reverse Transcriptase/Maturase; Reverse Transcriptase; Group II Intron-Encoded Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MYENLMEEVVSPENYGKALKAVVANDGSPGVDGMTTKQLSGHLMEHWGKVQAKLKRGSYIPSPVKRKEIRKENGGGMRKL
GIPTVLGAEVSGVPTEPFAADRSSTGEAELPESDE

Sequences:

>Translated_115_residues
MYENLMEEVVSPENYGKALKAVVANDGSPGVDGMTTKQLSGHLMEHWGKVQAKLKRGSYIPSPVKRKEIRKENGGGMRKL
GIPTVLGAEVSGVPTEPFAADRSSTGEAELPESDE
>Mature_115_residues
MYENLMEEVVSPENYGKALKAVVANDGSPGVDGMTTKQLSGHLMEHWGKVQAKLKRGSYIPSPVKRKEIRKENGGGMRKL
GIPTVLGAEVSGVPTEPFAADRSSTGEAELPESDE

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12355; Mature: 12355

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYENLMEEVVSPENYGKALKAVVANDGSPGVDGMTTKQLSGHLMEHWGKVQAKLKRGSYI
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PSPVKRKEIRKENGGGMRKLGIPTVLGAEVSGVPTEPFAADRSSTGEAELPESDE
CCCHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYENLMEEVVSPENYGKALKAVVANDGSPGVDGMTTKQLSGHLMEHWGKVQAKLKRGSYI
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PSPVKRKEIRKENGGGMRKLGIPTVLGAEVSGVPTEPFAADRSSTGEAELPESDE
CCCHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA