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The map label for this gene is 116622520

Identifier: 116622520

GI number: 116622520

Start: 4325268

End: 4325795

Strand: Reverse

Name: 116622520

Synonym: Acid_3418

Alternate gene names: NA

Gene position: 4325795-4325268 (Counterclockwise)

Preceding gene: 116622521

Following gene: 116622519

Centisome position: 43.41

GC content: 58.9

Gene sequence:

>528_bases
ATGATGCAGATGGAACGACTGCAAAGACCGGTCCTGGTGCTCAACGCCAGTTACGAACCGATCAATATCTGCGCCGCCCG
GCGCGCCCTGGTTTTGGTCTTGAAGGGCGTGGCGTCGGCGGAGGAGCTTTCAATCAACGCGGTACATTCGGCGCGAAACT
CAGTTCACGTGCCGAGCGTGATTCGCCTGCTCGAATACCGGCGGATACCACGCCAGACCCGCGCCCTCTCGCGCAAAAAC
ATCTTGATGCGCGATCGCTATACCTGCCAGTACTGCCATCGCTCCCTGGCCTCCGGCGAATTGACCCTGGACCATGTCAT
TCCCCGGTCGCGCGCCGGCGAATCGGCATGGGAAAACCTGGTAGCCTGCTGTCACTACTGCAATAATCGCAAGGGCAACC
GGACCCCGGAAGAAGCCGGAATGAAGTTGCTCCGCCAACCCCGCCCATTCAGCCTCCATACCAGCCGGCATTTGATGCGG
ATGATGGGAAAAGGCGAGGCGCAGTGGAGAAAATACCTGTTCTATTAA

Upstream 100 bases:

>100_bases
GCGCCAAACGAGTTGCGCTCTTAACGGTTGCTCGCGTAGACCGCCGCATGGAAAGCTGGCGGCTCGCAGCGTCCAATTCC
GAGGTGGGGGGAAGAATTTA

Downstream 100 bases:

>100_bases
GCCCCTACAGAATTAACAACTGCAACTTTTTGAAGTACATCCGTCAGTTGCGGCAGTTACGTACATGGGGTATAGTCGTT
CGTTGACTGGGTAATCAAGC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMQMERLQRPVLVLNASYEPINICAARRALVLVLKGVASAEELSINAVHSARNSVHVPSVIRLLEYRRIPRQTRALSRKN
ILMRDRYTCQYCHRSLASGELTLDHVIPRSRAGESAWENLVACCHYCNNRKGNRTPEEAGMKLLRQPRPFSLHTSRHLMR
MMGKGEAQWRKYLFY

Sequences:

>Translated_175_residues
MMQMERLQRPVLVLNASYEPINICAARRALVLVLKGVASAEELSINAVHSARNSVHVPSVIRLLEYRRIPRQTRALSRKN
ILMRDRYTCQYCHRSLASGELTLDHVIPRSRAGESAWENLVACCHYCNNRKGNRTPEEAGMKLLRQPRPFSLHTSRHLMR
MMGKGEAQWRKYLFY
>Mature_175_residues
MMQMERLQRPVLVLNASYEPINICAARRALVLVLKGVASAEELSINAVHSARNSVHVPSVIRLLEYRRIPRQTRALSRKN
ILMRDRYTCQYCHRSLASGELTLDHVIPRSRAGESAWENLVACCHYCNNRKGNRTPEEAGMKLLRQPRPFSLHTSRHLMR
MMGKGEAQWRKYLFY

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20289; Mature: 20289

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQMERLQRPVLVLNASYEPINICAARRALVLVLKGVASAEELSINAVHSARNSVHVPSV
CCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH
IRLLEYRRIPRQTRALSRKNILMRDRYTCQYCHRSLASGELTLDHVIPRSRAGESAWENL
HHHHHHHHCCHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHH
VACCHYCNNRKGNRTPEEAGMKLLRQPRPFSLHTSRHLMRMMGKGEAQWRKYLFY
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MMQMERLQRPVLVLNASYEPINICAARRALVLVLKGVASAEELSINAVHSARNSVHVPSV
CCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH
IRLLEYRRIPRQTRALSRKNILMRDRYTCQYCHRSLASGELTLDHVIPRSRAGESAWENL
HHHHHHHHCCHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHH
VACCHYCNNRKGNRTPEEAGMKLLRQPRPFSLHTSRHLMRMMGKGEAQWRKYLFY
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA