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The map label for this gene is ytfE [C]

Identifier: 116622425

GI number: 116622425

Start: 4203327

End: 4204007

Strand: Reverse

Name: ytfE [C]

Synonym: Acid_3322

Alternate gene names: 116622425

Gene position: 4204007-4203327 (Counterclockwise)

Preceding gene: 116622432

Following gene: 116622424

Centisome position: 42.19

GC content: 66.37

Gene sequence:

>681_bases
ATGACAACACTCACTCCGGAACGCACCGTCGGACAGATCGCCGCCGCTCTTCCCGCCTCCGTCAGGGTCTTCGAAAAGCA
CGGCATTGATTTCTGCTGCGGTGGCTCCGTTCCGATCACCGACGCGTGCCGCCGCGCCGGCGTGGATGCGGCGCTCCTGC
TCCACGAAATCGACCAGGCCGGCCAGGCTCCCGCCGCGGACGCCACCGATTGGCTGACCGCACCGCTGCCGGCGCTCATG
GACCACATCCTCGACACCCATCACGTATATATGAAGGCCCAGCTTCCCCGGCTCGAGGCCATGCTCGCCAAGGTCCTCGA
GGCTCACGGCGACCGCCACGGCGAAACCCTCCGTGCCCTCGCCGCAGTTTACGGCCCCATGAAAGCCGAGCTCGATGCCC
ATCTGCTCAAGGAGGAGAGGATCCTCTTCCCCATGATCCGCACCGGCCAATCCAACTGCGGCGGCGTCCAGAACCCCATC
CGCGTCATGCTGTTCGAGCACGATTCCGCCGGCGATGCGCTGGCCGGGATGCGCCGCCTCACCGCCGGCTACACGCCCCC
ACCCGACGCCTGCAACACCTTCCGCGCCCTGTACTACGAGCTCTCCGAGATGGAGCGCGACCTGCACCGCCACATCCACC
TCGAGAACAACATCCTCTTCCCGCGTGCGCTAGCCGAATAG

Upstream 100 bases:

>100_bases
GGAAGGCAGCGAAGTTGTAGCGCAAAAACGCCACCCCCTGCTTACTCCCCCGGTGACTGCGGTCACCGACTTCCCAACCT
CCGCCCGCCACAATCGAACC

Downstream 100 bases:

>100_bases
GACAGGCCTTCGGGCCTGTTCGCAATCTCACCAATCTCCCTTTCCTCATAGTGGTATAATTCAAGCTTATGAACATCCCC
TAACTGCCCGCTCCGCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTTLTPERTVGQIAAALPASVRVFEKHGIDFCCGGSVPITDACRRAGVDAALLLHEIDQAGQAPAADATDWLTAPLPALM
DHILDTHHVYMKAQLPRLEAMLAKVLEAHGDRHGETLRALAAVYGPMKAELDAHLLKEERILFPMIRTGQSNCGGVQNPI
RVMLFEHDSAGDALAGMRRLTAGYTPPPDACNTFRALYYELSEMERDLHRHIHLENNILFPRALAE

Sequences:

>Translated_226_residues
MTTLTPERTVGQIAAALPASVRVFEKHGIDFCCGGSVPITDACRRAGVDAALLLHEIDQAGQAPAADATDWLTAPLPALM
DHILDTHHVYMKAQLPRLEAMLAKVLEAHGDRHGETLRALAAVYGPMKAELDAHLLKEERILFPMIRTGQSNCGGVQNPI
RVMLFEHDSAGDALAGMRRLTAGYTPPPDACNTFRALYYELSEMERDLHRHIHLENNILFPRALAE
>Mature_225_residues
TTLTPERTVGQIAAALPASVRVFEKHGIDFCCGGSVPITDACRRAGVDAALLLHEIDQAGQAPAADATDWLTAPLPALMD
HILDTHHVYMKAQLPRLEAMLAKVLEAHGDRHGETLRALAAVYGPMKAELDAHLLKEERILFPMIRTGQSNCGGVQNPIR
VMLFEHDSAGDALAGMRRLTAGYTPPPDACNTFRALYYELSEMERDLHRHIHLENNILFPRALAE

Specific function: Unknown

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfE [H]

Homologues:

Organism=Escherichia coli, GI1790654, Length=219, Percent_Identity=37.4429223744292, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24804; Mature: 24673

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLTPERTVGQIAAALPASVRVFEKHGIDFCCGGSVPITDACRRAGVDAALLLHEIDQA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
GQAPAADATDWLTAPLPALMDHILDTHHVYMKAQLPRLEAMLAKVLEAHGDRHGETLRAL
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AAVYGPMKAELDAHLLKEERILFPMIRTGQSNCGGVQNPIRVMLFEHDSAGDALAGMRRL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
TAGYTPPPDACNTFRALYYELSEMERDLHRHIHLENNILFPRALAE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCC
>Mature Secondary Structure 
TTLTPERTVGQIAAALPASVRVFEKHGIDFCCGGSVPITDACRRAGVDAALLLHEIDQA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
GQAPAADATDWLTAPLPALMDHILDTHHVYMKAQLPRLEAMLAKVLEAHGDRHGETLRAL
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AAVYGPMKAELDAHLLKEERILFPMIRTGQSNCGGVQNPIRVMLFEHDSAGDALAGMRRL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
TAGYTPPPDACNTFRALYYELSEMERDLHRHIHLENNILFPRALAE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]