| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622432
Identifier: 116622432
GI number: 116622432
Start: 4215810
End: 4216883
Strand: Reverse
Name: 116622432
Synonym: Acid_3330
Alternate gene names: NA
Gene position: 4216883-4215810 (Counterclockwise)
Preceding gene: 116622436
Following gene: 116622425
Centisome position: 42.31
GC content: 66.29
Gene sequence:
>1074_bases ATGTTGCGCAGTAGTGTAGTCGTAACTCTACTGGCAGTCGCCTTCGGTGCTACCCCCGATCGCGATTTCTCGGGCAAATG GACGCTCGATTCCGCCGCCAGCCGCACCCAGTCCCTCGCCATGGAGATCGAGCCCGTGCTCATCGTCGTCCAGCAGGAGG ATGCGATCCGCACCTCCGGCAACGCCAGCTTCGCGCTCGATGGTAGCGAAACCCGCTACCGCTCCGGCGATGAAACCCGC AGCACCGCCGTTAAATGGGAAGGCGCCGCCCTGTTGATCAACACCCTGGTTTCCGGCCCGCGAGACTACACCATCATGGA CCGTTGGAAACTCTCGCCCGACCACACGACCCTCACCATCACCCGCCAGGTCATTCGCGGCACCCAGGAAGTGGAAGGCG CCTTGGTCTATCGCTCAGATGCCTACCGCGCGGAAACCGTGGACCCCGTCCGCACCTTGCCGGTCCGTCCCGAATCCCGC CCCGCACCCGCTCCCGGCGAATTCGTAGTGCCGGAGGGCACCCGCATCGCGCTCGCCCTGCGCAATTCCATCGACACCAA ACACTCCCGCGAAGGCGACCGCGTGTATCTCGAAACCGTCTACCCGGTCGCCCGCGATGGCCGCATCGTGATCCCCCGCG GCAGTTTTGTCAACGGCACCGTGACCGTCAGCAAACCCGCCGGCCGCGCCAAGGGAAAGGGCGAGCTCTACGTCCGCTTC GACTCCCTCACCCTGCCCAACGGCGTGACCCGCGATTTCCGCTCCCGCCTCGCCTCCGCCGAAGGCAAAACGGTGGACCC CAAGGAAGGCAAAGTCTCCGGCGAACGCGACAAGGCTCACGACGCCCGCACCGTAGCCACCACTACCGGCATGGGCGCCA CTCTCGGAGGCCTGATCGGCCGAGCCGGCGGCAGCACCCTGAAAGGCATCGGCATTGGTGGCGCCGCCGGTGCCGCCGCC GGTCTGGCCGGGGTCATGATGAAAAAGGGCCCCGACGCCACCCTCCGCGCCGGCACCACCCTCGAAATGATCCTCGATCG CGACCTCCACTTCACCGAAGCCGAGCTGCGCTAG
Upstream 100 bases:
>100_bases GAGAAAACTCCTGCGCGATGAAGTTGACATTCCTGGTCGTCCTCGGCGAATAGAATAACAGGCTGTGAAATGGTTTTGGG CGCTTTGCTAAAATCGCAGT
Downstream 100 bases:
>100_bases AGTGTCTGCAGCCCGCGCAGAATTCGCCGCCCCATCAGAGCCGCGACCGTTAGGGAGCGTCCGTAATACGCTCGCCTGAC TCCCTTACTTACTCAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MLRSSVVVTLLAVAFGATPDRDFSGKWTLDSAASRTQSLAMEIEPVLIVVQQEDAIRTSGNASFALDGSETRYRSGDETR STAVKWEGAALLINTLVSGPRDYTIMDRWKLSPDHTTLTITRQVIRGTQEVEGALVYRSDAYRAETVDPVRTLPVRPESR PAPAPGEFVVPEGTRIALALRNSIDTKHSREGDRVYLETVYPVARDGRIVIPRGSFVNGTVTVSKPAGRAKGKGELYVRF DSLTLPNGVTRDFRSRLASAEGKTVDPKEGKVSGERDKAHDARTVATTTGMGATLGGLIGRAGGSTLKGIGIGGAAGAAA GLAGVMMKKGPDATLRAGTTLEMILDRDLHFTEAELR
Sequences:
>Translated_357_residues MLRSSVVVTLLAVAFGATPDRDFSGKWTLDSAASRTQSLAMEIEPVLIVVQQEDAIRTSGNASFALDGSETRYRSGDETR STAVKWEGAALLINTLVSGPRDYTIMDRWKLSPDHTTLTITRQVIRGTQEVEGALVYRSDAYRAETVDPVRTLPVRPESR PAPAPGEFVVPEGTRIALALRNSIDTKHSREGDRVYLETVYPVARDGRIVIPRGSFVNGTVTVSKPAGRAKGKGELYVRF DSLTLPNGVTRDFRSRLASAEGKTVDPKEGKVSGERDKAHDARTVATTTGMGATLGGLIGRAGGSTLKGIGIGGAAGAAA GLAGVMMKKGPDATLRAGTTLEMILDRDLHFTEAELR >Mature_357_residues MLRSSVVVTLLAVAFGATPDRDFSGKWTLDSAASRTQSLAMEIEPVLIVVQQEDAIRTSGNASFALDGSETRYRSGDETR STAVKWEGAALLINTLVSGPRDYTIMDRWKLSPDHTTLTITRQVIRGTQEVEGALVYRSDAYRAETVDPVRTLPVRPESR PAPAPGEFVVPEGTRIALALRNSIDTKHSREGDRVYLETVYPVARDGRIVIPRGSFVNGTVTVSKPAGRAKGKGELYVRF DSLTLPNGVTRDFRSRLASAEGKTVDPKEGKVSGERDKAHDARTVATTTGMGATLGGLIGRAGGSTLKGIGIGGAAGAAA GLAGVMMKKGPDATLRAGTTLEMILDRDLHFTEAELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38138; Mature: 38138
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSSVVVTLLAVAFGATPDRDFSGKWTLDSAASRTQSLAMEIEPVLIVVQQEDAIRTSG CCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHEEEECEEEEEEECCCCEECCC NASFALDGSETRYRSGDETRSTAVKWEGAALLINTLVSGPRDYTIMDRWKLSPDHTTLTI CCEEEECCCCCCCCCCCCHHHEEEEECCHHHEEHHHHCCCCCEEEEEEEECCCCCEEEEE TRQVIRGTQEVEGALVYRSDAYRAETVDPVRTLPVRPESRPAPAPGEFVVPEGTRIALAL EHHHHCCCHHHCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCCCEEEEEE RNSIDTKHSREGDRVYLETVYPVARDGRIVIPRGSFVNGTVTVSKPAGRAKGKGELYVRF ECCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCEEEEECCCCCCCCCCEEEEEE DSLTLPNGVTRDFRSRLASAEGKTVDPKEGKVSGERDKAHDARTVATTTGMGATLGGLIG CCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH RAGGSTLKGIGIGGAAGAAAGLAGVMMKKGPDATLRAGTTLEMILDRDLHFTEAELR CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCHHCCC >Mature Secondary Structure MLRSSVVVTLLAVAFGATPDRDFSGKWTLDSAASRTQSLAMEIEPVLIVVQQEDAIRTSG CCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHEEEECEEEEEEECCCCEECCC NASFALDGSETRYRSGDETRSTAVKWEGAALLINTLVSGPRDYTIMDRWKLSPDHTTLTI CCEEEECCCCCCCCCCCCHHHEEEEECCHHHEEHHHHCCCCCEEEEEEEECCCCCEEEEE TRQVIRGTQEVEGALVYRSDAYRAETVDPVRTLPVRPESRPAPAPGEFVVPEGTRIALAL EHHHHCCCHHHCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCCCEEEEEE RNSIDTKHSREGDRVYLETVYPVARDGRIVIPRGSFVNGTVTVSKPAGRAKGKGELYVRF ECCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCEEEEECCCCCCCCCCEEEEEE DSLTLPNGVTRDFRSRLASAEGKTVDPKEGKVSGERDKAHDARTVATTTGMGATLGGLIG CCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH RAGGSTLKGIGIGGAAGAAAGLAGVMMKKGPDATLRAGTTLEMILDRDLHFTEAELR CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA