| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622378
Identifier: 116622378
GI number: 116622378
Start: 4139168
End: 4140406
Strand: Direct
Name: 116622378
Synonym: Acid_3272
Alternate gene names: NA
Gene position: 4139168-4140406 (Clockwise)
Preceding gene: 116622377
Following gene: 116622379
Centisome position: 41.53
GC content: 65.38
Gene sequence:
>1239_bases GTGGTAGTGGTGGCCGGGCTGCTGGCTGCCGCCGCGGCGCGCGGGCAGCACGGACGCGATCCCGCGGCGGTGCTGGAGCA GGCGCGCGCGCGGCTGCAGGCGATGGCCCGCAACCTCGAGAAGTACGTCTGCACGGAGACCATAAATCGCAGCTACTTTC AACGAGGGGAATCGACCCGGTTAGACTCCACCGATCGCGTGCGTCTCGAAGTGTCGCTGGCGCAGGGCCGCGAACTGCAT TCCTGGCCGGGAGCCACGAGGTTCGACGCGCGCGATGTGGATGCGCTGATCCGCAACGGTCCGGTATCGACCGGCGCCTT CGGCGGTTATCTGGCCAGTGTTTTCGAACAGCCCGGGGTCACATTCGAGTATGCCGGCGAGCAGACGGTGAATGGCCGGG CGATGTTCGAGTATCGATACCGTGTGCCGGTCGAAGCCAGCCGCTTCGAGATCAAAGCGCCGACTGCGTGGCGCGCGGCG GCATACGAAGGCAGCTTCCAGATTGACCCGGAATCGCTCGAACTGAAGCGGCTGACGGTCCGCACCGGCGAGCTGCCTGC GGGCGCGGGATTCTGCAAAGCCTCTACAACCCTCGAGTATGAACGCGTACACATCGGCGATAGCGACGTAGTGCTGCCGC GTCAAAGTGAACTCGAGATCGTAATGGATGAGAGCAGGGAAGCACGTAACGTCACCACGTTTTCGAAGTGCCGCGAATAC CAGGCGGAGTCGGCGATCTCCTTCGATGCGCCTGCCAGCGGGGAGAGTCCCGCGGCTCGCGGGGGTGGCCGCGGGCGCGT GGCGCTGCCGATCGGCCTGCCGGTGGCGCTCGCGCTGATGGAACCGATCGATAGCGCGACTGCCGCGGCGGGCGACGAGA TTGCGGCGAAGGTGATCAAACCGGTGCGGCGCGCCGCTTCCACGGAGACGCTGATTCCGGCGGGTGCGATTGTGCGCGGC CGCATTCGCCGGGTTGAACACCATTTATTACCCTCGCGTTATTTCCTGGTGGCGATCGCGTTCAACCGGGTGGAGTGGCA AGGGTTGGTATCGCCTTTCGCGGCGCGCAGCGAACCTGACGCTGCGCTGGTGAAAGAACTGGATGCGAACCTCGCGCTGC GCGAGACCGGATTCCGATTCTGGGGCGTGGGAACGTTCCTGTGGCGGACGGCGAAGAGCAGCACCGTGATCCCGGCCGGA TTCGAATCGAAGTGGTTCACGCTGGTCGCCGGCCGGTAA
Upstream 100 bases:
>100_bases GAGGCAGCCAAACTGACGCCGGCGGAGGTTTCCGAGCAGGACCGCGCCGCGCAGAACTGGAAGCCGAGAATGGTGGCGGC CAATTCCAGGCAGTAAGGCA
Downstream 100 bases:
>100_bases GGCGCCCAGCCAACGGGCGGGTTCGCACAGTTCCAGATTGCGTCATTTTAATTCGGCGCCCGCGCCTGTTGCTGAAACTG AAAATCGGGTTTATCGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MVVVAGLLAAAAARGQHGRDPAAVLEQARARLQAMARNLEKYVCTETINRSYFQRGESTRLDSTDRVRLEVSLAQGRELH SWPGATRFDARDVDALIRNGPVSTGAFGGYLASVFEQPGVTFEYAGEQTVNGRAMFEYRYRVPVEASRFEIKAPTAWRAA AYEGSFQIDPESLELKRLTVRTGELPAGAGFCKASTTLEYERVHIGDSDVVLPRQSELEIVMDESREARNVTTFSKCREY QAESAISFDAPASGESPAARGGGRGRVALPIGLPVALALMEPIDSATAAAGDEIAAKVIKPVRRAASTETLIPAGAIVRG RIRRVEHHLLPSRYFLVAIAFNRVEWQGLVSPFAARSEPDAALVKELDANLALRETGFRFWGVGTFLWRTAKSSTVIPAG FESKWFTLVAGR
Sequences:
>Translated_412_residues MVVVAGLLAAAAARGQHGRDPAAVLEQARARLQAMARNLEKYVCTETINRSYFQRGESTRLDSTDRVRLEVSLAQGRELH SWPGATRFDARDVDALIRNGPVSTGAFGGYLASVFEQPGVTFEYAGEQTVNGRAMFEYRYRVPVEASRFEIKAPTAWRAA AYEGSFQIDPESLELKRLTVRTGELPAGAGFCKASTTLEYERVHIGDSDVVLPRQSELEIVMDESREARNVTTFSKCREY QAESAISFDAPASGESPAARGGGRGRVALPIGLPVALALMEPIDSATAAAGDEIAAKVIKPVRRAASTETLIPAGAIVRG RIRRVEHHLLPSRYFLVAIAFNRVEWQGLVSPFAARSEPDAALVKELDANLALRETGFRFWGVGTFLWRTAKSSTVIPAG FESKWFTLVAGR >Mature_412_residues MVVVAGLLAAAAARGQHGRDPAAVLEQARARLQAMARNLEKYVCTETINRSYFQRGESTRLDSTDRVRLEVSLAQGRELH SWPGATRFDARDVDALIRNGPVSTGAFGGYLASVFEQPGVTFEYAGEQTVNGRAMFEYRYRVPVEASRFEIKAPTAWRAA AYEGSFQIDPESLELKRLTVRTGELPAGAGFCKASTTLEYERVHIGDSDVVLPRQSELEIVMDESREARNVTTFSKCREY QAESAISFDAPASGESPAARGGGRGRVALPIGLPVALALMEPIDSATAAAGDEIAAKVIKPVRRAASTETLIPAGAIVRG RIRRVEHHLLPSRYFLVAIAFNRVEWQGLVSPFAARSEPDAALVKELDANLALRETGFRFWGVGTFLWRTAKSSTVIPAG FESKWFTLVAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44963; Mature: 44963
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVAGLLAAAAARGQHGRDPAAVLEQARARLQAMARNLEKYVCTETINRSYFQRGESTR CEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDSTDRVRLEVSLAQGRELHSWPGATRFDARDVDALIRNGPVSTGAFGGYLASVFEQPGV CCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC TFEYAGEQTVNGRAMFEYRYRVPVEASRFEIKAPTAWRAAAYEGSFQIDPESLELKRLTV EEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHEEECCCEEECCCCCEEEEEEE RTGELPAGAGFCKASTTLEYERVHIGDSDVVLPRQSELEIVMDESREARNVTTFSKCREY ECCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCHHHHHHHHH QAESAISFDAPASGESPAARGGGRGRVALPIGLPVALALMEPIDSATAAAGDEIAAKVIK HHHCCEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHCCHHHHHHHHH PVRRAASTETLIPAGAIVRGRIRRVEHHLLPSRYFLVAIAFNRVEWQGLVSPFAARSEPD HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEHHHHHHHHHCCCCCH AALVKELDANLALRETGFRFWGVGTFLWRTAKSSTVIPAGFESKWFTLVAGR HHHHHHHCCCEEEHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure MVVVAGLLAAAAARGQHGRDPAAVLEQARARLQAMARNLEKYVCTETINRSYFQRGESTR CEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDSTDRVRLEVSLAQGRELHSWPGATRFDARDVDALIRNGPVSTGAFGGYLASVFEQPGV CCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC TFEYAGEQTVNGRAMFEYRYRVPVEASRFEIKAPTAWRAAAYEGSFQIDPESLELKRLTV EEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHEEECCCEEECCCCCEEEEEEE RTGELPAGAGFCKASTTLEYERVHIGDSDVVLPRQSELEIVMDESREARNVTTFSKCREY ECCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCHHHHHHHHH QAESAISFDAPASGESPAARGGGRGRVALPIGLPVALALMEPIDSATAAAGDEIAAKVIK HHHCCEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHCCHHHHHHHHH PVRRAASTETLIPAGAIVRGRIRRVEHHLLPSRYFLVAIAFNRVEWQGLVSPFAARSEPD HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEHHHHHHHHHCCCCCH AALVKELDANLALRETGFRFWGVGTFLWRTAKSSTVIPAGFESKWFTLVAGR HHHHHHHCCCEEEHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA