| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116622348
GI number: 116622348
Start: 4103611
End: 4106031
Strand: Direct
Name: macB [H]
Synonym: Acid_3242
Alternate gene names: 116622348
Gene position: 4103611-4106031 (Clockwise)
Preceding gene: 116622343
Following gene: 116622350
Centisome position: 41.18
GC content: 67.7
Gene sequence:
>2421_bases GTGAAATCCTTTTTCGAAGATCTCCGCTTCGCCCTCCGGGTGCTATTCCGCAACTGCGGTTTCACGATCGTGGCCGTGCT GACGCTCGCGCTCGCGATCGGGGCCACCAGCACCATCTTCAGCGCGGTCAGCGCCATCCTGCTCCGTGATCTGCCTTACC CCGATCCCGGACGCCTCGCGGTTTTGTGGGGCGAGGATCGCGCCCGCGATTCCCACCGCGGCCAGATCTGCTACCCGGAC CTGCAGGATTGGCGCGCGCAAAGCAGCGCCATCGAGAGCGCGGCGGCCTTCAGCGGCTACTGGCAACCCGTGCTGTCCGG CTCGTCGGGCGCCGAGCAGGTAGATGGCGTCCGCGTTTCCACGGATTTCTTTCGCGTTCTGAAAGTCAGCCCCATGCTGG GTCGCGAATTCCTGCCGGAAGAAGAGATGACGGGCGTCAATGTCGCGATTCTGAGCCACGGCTTGTGGGCGCGGCGCTTC GGCAGCGACCCTGGAATCGTCGGCCGCAAGGTCGCCCTTTCGGGAGCGCCCTATACGGTGGTCGGAGTGCTCCCGCCGCG GTTTCAGCCGTTGCCGGCCCGCCTTCTGGAGCATTCGGCGGAGATCTACCGTCCGCTCGGCAAGGAGTTCAGCGACGAAA TCCGCGACGGCCACCATTTGCGCGCCGTCGCCCGCCTCAAGCCCGGTGTCACGCTGGCACAGGCGCAAGCGCAGCTTACG ACGATTGCGCAGCGCATCGAAGCCGCCAATCCGGCGACCAATCGCGGCCGCGGCGTGCGCGTGGTCGGGCTGCACGACGA TATGGTGCAGGAAATCCGGCCGGCGCTTCTGGTGCTGCAAGCCTGCGTGCTGATGATCGTCCTGATCGCCTGCGCGAATG TCGCCAACCTGGTGCTGGCGCGCTCCTCGGGCCGCCGCCGCGAGATCGCCATTCGCCAGGCGATGGGCGCCGCGCGCAGT CGCCTGGTGCGCCAGATGCTCACCGAAAGCCTCGCGCTCGCAGTAATGGGCGGAGCCGGCGGGATTCTGGTCGCCTTCTG GTGCCTGCCGCTATTCGAACAACTTGGCGCCAAGAGCATTCCGGAAGTCGCCCGGCTTTCGATCGATTGGCGCGTCGCGG GCTTCGCCGCGGCGCTTTCCATGGTCACGGGCGTGATCTTCGGCATGGTGCCAGCGATGGAACTCTCGGCCGGAACGCCG GTCGCCGCGCTCCGCGAGGGCGGCCGCGGCAGCGGCAGGGCCGCCGGAGCACGACGCCGCGGATTGCTCGTAGTGGCCGA ATCGGCCATCGCCCTCGTCCTGCTGATCGCCGCCGGACTGCTGGTCAACAGCTTCCTCCGTCTGCGCCACGTCGATGCCG GCTTCGATGGCTCCAACGTTCTGGTGAGCGAACTCTCCCTGCCTACCTCGCGCTATCCGGTAGGGGACGCGCGCTCTGCC TTCTTCGCACGACTGCTTCCCGAATTGCACCGCCTCCCGGGCGTCACCGCCGCCGCGATGACCAGCGTGCTGCCCGAATC CGGCGACTTCGACCAGCGCACGATGGACGTCGAAGGACTTACCTTCGCCGCCGGCGCCGCACCGAATCCCGATCAATACG CTGTTACCCCCGAGTACTTCCGCGCCCTGGGAATCGCCCTACGTCGCGGCCGGCTTTTCGCCGAAGACGACGATGCCGCG CATGCGCAGGTGGCCCTGCTCAACGAGATGGCGGCGCAACGACTCTGGCCCGGCGAAGATCCGGTCGGCCGCAAGGTGCG GACCGGCGGCTCGAATGGTCCCTGGCGCACCGTGGTCGGCGTGGTCGGCGACGTCTACCAGTACGGCCTGGATTCCCGCA AGACGCTGCAGATTTATGTGCCGTACGCCCAGTTCCGCGTGCCCGGCGTCACCATGGTGGTGCGCGCGGCCGGCGACCCG CTGGCGCTGGTGCCGGCCATCCGCTCGCAACTGAAGGCCATCGACCCCGAACTTCCGCTGGTCAAGGTCGCGACCATGGA CCAGGTGCTGGCCGATTCCGTGGCCGGCCGGCGCTTCTCCATGCTGCTCCTGGCGGCGCTCGGCGCGTGCGCGATGCTGC TTGCCGCGATCGGTATTTACGGCGTGACCGCCTACTCCGTCACGCAGCGAACCGCCGAATTCGGGATTCGCATGGCCCTA GGCGCGCAAACCGGCAGCGTGATCGCGCTTGTGATGCGGCACAACATAATGTTGATAGGAGCGGGCAGCGCGATCGGCCT GGCGGTATCGCTGATCTGCACTCGCTTCCTCGGCCGCCTCCTCTTCGGCGTCAGCGCCGTCGATCCCGCGACCTTTGCGC TCGCCGCCGGAGCTCTTGCCGCGGTCGCCATGGCGGCGAGCTATATCCCCGCGCGCCGCGCTACCCGCGTTGACCCGATG GCCGCGCTCCGCAACGACTAG
Upstream 100 bases:
>100_bases CGTGATCGAACACCGCGTCCCGCGAGGGGACGGCGTCCGGGCTGTCCCGAATTGACCGGCAAGCACTTAGCACGGCCTTG CAGCTGCGTTACCGCTTGGC
Downstream 100 bases:
>100_bases TGCTCTGACCGCGAGATGAAATCCGCAGCGAGCTTCGTTCGACTGCGCGCAAGCTAAAAGCGTACGCCACCAAGGCGATG CTGTTCAGTGGTGGGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MKSFFEDLRFALRVLFRNCGFTIVAVLTLALAIGATSTIFSAVSAILLRDLPYPDPGRLAVLWGEDRARDSHRGQICYPD LQDWRAQSSAIESAAAFSGYWQPVLSGSSGAEQVDGVRVSTDFFRVLKVSPMLGREFLPEEEMTGVNVAILSHGLWARRF GSDPGIVGRKVALSGAPYTVVGVLPPRFQPLPARLLEHSAEIYRPLGKEFSDEIRDGHHLRAVARLKPGVTLAQAQAQLT TIAQRIEAANPATNRGRGVRVVGLHDDMVQEIRPALLVLQACVLMIVLIACANVANLVLARSSGRRREIAIRQAMGAARS RLVRQMLTESLALAVMGGAGGILVAFWCLPLFEQLGAKSIPEVARLSIDWRVAGFAAALSMVTGVIFGMVPAMELSAGTP VAALREGGRGSGRAAGARRRGLLVVAESAIALVLLIAAGLLVNSFLRLRHVDAGFDGSNVLVSELSLPTSRYPVGDARSA FFARLLPELHRLPGVTAAAMTSVLPESGDFDQRTMDVEGLTFAAGAAPNPDQYAVTPEYFRALGIALRRGRLFAEDDDAA HAQVALLNEMAAQRLWPGEDPVGRKVRTGGSNGPWRTVVGVVGDVYQYGLDSRKTLQIYVPYAQFRVPGVTMVVRAAGDP LALVPAIRSQLKAIDPELPLVKVATMDQVLADSVAGRRFSMLLLAALGACAMLLAAIGIYGVTAYSVTQRTAEFGIRMAL GAQTGSVIALVMRHNIMLIGAGSAIGLAVSLICTRFLGRLLFGVSAVDPATFALAAGALAAVAMAASYIPARRATRVDPM AALRND
Sequences:
>Translated_806_residues MKSFFEDLRFALRVLFRNCGFTIVAVLTLALAIGATSTIFSAVSAILLRDLPYPDPGRLAVLWGEDRARDSHRGQICYPD LQDWRAQSSAIESAAAFSGYWQPVLSGSSGAEQVDGVRVSTDFFRVLKVSPMLGREFLPEEEMTGVNVAILSHGLWARRF GSDPGIVGRKVALSGAPYTVVGVLPPRFQPLPARLLEHSAEIYRPLGKEFSDEIRDGHHLRAVARLKPGVTLAQAQAQLT TIAQRIEAANPATNRGRGVRVVGLHDDMVQEIRPALLVLQACVLMIVLIACANVANLVLARSSGRRREIAIRQAMGAARS RLVRQMLTESLALAVMGGAGGILVAFWCLPLFEQLGAKSIPEVARLSIDWRVAGFAAALSMVTGVIFGMVPAMELSAGTP VAALREGGRGSGRAAGARRRGLLVVAESAIALVLLIAAGLLVNSFLRLRHVDAGFDGSNVLVSELSLPTSRYPVGDARSA FFARLLPELHRLPGVTAAAMTSVLPESGDFDQRTMDVEGLTFAAGAAPNPDQYAVTPEYFRALGIALRRGRLFAEDDDAA HAQVALLNEMAAQRLWPGEDPVGRKVRTGGSNGPWRTVVGVVGDVYQYGLDSRKTLQIYVPYAQFRVPGVTMVVRAAGDP LALVPAIRSQLKAIDPELPLVKVATMDQVLADSVAGRRFSMLLLAALGACAMLLAAIGIYGVTAYSVTQRTAEFGIRMAL GAQTGSVIALVMRHNIMLIGAGSAIGLAVSLICTRFLGRLLFGVSAVDPATFALAAGALAAVAMAASYIPARRATRVDPM AALRND >Mature_806_residues MKSFFEDLRFALRVLFRNCGFTIVAVLTLALAIGATSTIFSAVSAILLRDLPYPDPGRLAVLWGEDRARDSHRGQICYPD LQDWRAQSSAIESAAAFSGYWQPVLSGSSGAEQVDGVRVSTDFFRVLKVSPMLGREFLPEEEMTGVNVAILSHGLWARRF GSDPGIVGRKVALSGAPYTVVGVLPPRFQPLPARLLEHSAEIYRPLGKEFSDEIRDGHHLRAVARLKPGVTLAQAQAQLT TIAQRIEAANPATNRGRGVRVVGLHDDMVQEIRPALLVLQACVLMIVLIACANVANLVLARSSGRRREIAIRQAMGAARS RLVRQMLTESLALAVMGGAGGILVAFWCLPLFEQLGAKSIPEVARLSIDWRVAGFAAALSMVTGVIFGMVPAMELSAGTP VAALREGGRGSGRAAGARRRGLLVVAESAIALVLLIAAGLLVNSFLRLRHVDAGFDGSNVLVSELSLPTSRYPVGDARSA FFARLLPELHRLPGVTAAAMTSVLPESGDFDQRTMDVEGLTFAAGAAPNPDQYAVTPEYFRALGIALRRGRLFAEDDDAA HAQVALLNEMAAQRLWPGEDPVGRKVRTGGSNGPWRTVVGVVGDVYQYGLDSRKTLQIYVPYAQFRVPGVTMVVRAAGDP LALVPAIRSQLKAIDPELPLVKVATMDQVLADSVAGRRFSMLLLAALGACAMLLAAIGIYGVTAYSVTQRTAEFGIRMAL GAQTGSVIALVMRHNIMLIGAGSAIGLAVSLICTRFLGRLLFGVSAVDPATFALAAGALAAVAMAASYIPARRATRVDPM AALRND
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=285, Percent_Identity=27.0175438596491, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 85848; Mature: 85848
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFFEDLRFALRVLFRNCGFTIVAVLTLALAIGATSTIFSAVSAILLRDLPYPDPGRLA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEE VLWGEDRARDSHRGQICYPDLQDWRAQSSAIESAAAFSGYWQPVLSGSSGAEQVDGVRVS EEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEH TDFFRVLKVSPMLGREFLPEEEMTGVNVAILSHGLWARRFGSDPGIVGRKVALSGAPYTV HHHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEECCCCEEE VGVLPPRFQPLPARLLEHSAEIYRPLGKEFSDEIRDGHHLRAVARLKPGVTLAQAQAQLT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH TIAQRIEAANPATNRGRGVRVVGLHDDMVQEIRPALLVLQACVLMIVLIACANVANLVLA HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSSGRRREIAIRQAMGAARSRLVRQMLTESLALAVMGGAGGILVAFWCLPLFEQLGAKSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC PEVARLSIDWRVAGFAAALSMVTGVIFGMVPAMELSAGTPVAALREGGRGSGRAAGARRR CHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHC GLLVVAESAIALVLLIAAGLLVNSFLRLRHVDAGFDGSNVLVSELSLPTSRYPVGDARSA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCHHHH FFARLLPELHRLPGVTAAAMTSVLPESGDFDQRTMDVEGLTFAAGAAPNPDQYAVTPEYF HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHH RALGIALRRGRLFAEDDDAAHAQVALLNEMAAQRLWPGEDPVGRKVRTGGSNGPWRTVVG HHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHH VVGDVYQYGLDSRKTLQIYVPYAQFRVPGVTMVVRAAGDPLALVPAIRSQLKAIDPELPL HHHHHHHHCCCCCCEEEEEECHHHHCCCCEEEEEEECCCCEEHHHHHHHHHHHCCCCCCE VKVATMDQVLADSVAGRRFSMLLLAALGACAMLLAAIGIYGVTAYSVTQRTAEFGIRMAL EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE GAQTGSVIALVMRHNIMLIGAGSAIGLAVSLICTRFLGRLLFGVSAVDPATFALAAGALA CCCCCHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AVAMAASYIPARRATRVDPMAALRND HHHHHHHHCCHHHCCCCCHHHHHCCC >Mature Secondary Structure MKSFFEDLRFALRVLFRNCGFTIVAVLTLALAIGATSTIFSAVSAILLRDLPYPDPGRLA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEE VLWGEDRARDSHRGQICYPDLQDWRAQSSAIESAAAFSGYWQPVLSGSSGAEQVDGVRVS EEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEH TDFFRVLKVSPMLGREFLPEEEMTGVNVAILSHGLWARRFGSDPGIVGRKVALSGAPYTV HHHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEECCCCEEE VGVLPPRFQPLPARLLEHSAEIYRPLGKEFSDEIRDGHHLRAVARLKPGVTLAQAQAQLT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH TIAQRIEAANPATNRGRGVRVVGLHDDMVQEIRPALLVLQACVLMIVLIACANVANLVLA HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSSGRRREIAIRQAMGAARSRLVRQMLTESLALAVMGGAGGILVAFWCLPLFEQLGAKSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC PEVARLSIDWRVAGFAAALSMVTGVIFGMVPAMELSAGTPVAALREGGRGSGRAAGARRR CHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHC GLLVVAESAIALVLLIAAGLLVNSFLRLRHVDAGFDGSNVLVSELSLPTSRYPVGDARSA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCHHHH FFARLLPELHRLPGVTAAAMTSVLPESGDFDQRTMDVEGLTFAAGAAPNPDQYAVTPEYF HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHH RALGIALRRGRLFAEDDDAAHAQVALLNEMAAQRLWPGEDPVGRKVRTGGSNGPWRTVVG HHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHH VVGDVYQYGLDSRKTLQIYVPYAQFRVPGVTMVVRAAGDPLALVPAIRSQLKAIDPELPL HHHHHHHHCCCCCCEEEEEECHHHHCCCCEEEEEEECCCCEEHHHHHHHHHHHCCCCCCE VKVATMDQVLADSVAGRRFSMLLLAALGACAMLLAAIGIYGVTAYSVTQRTAEFGIRMAL EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE GAQTGSVIALVMRHNIMLIGAGSAIGLAVSLICTRFLGRLLFGVSAVDPATFALAAGALA CCCCCHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AVAMAASYIPARRATRVDPMAALRND HHHHHHHHCCHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA