| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622350
Identifier: 116622350
GI number: 116622350
Start: 4107945
End: 4108913
Strand: Direct
Name: 116622350
Synonym: Acid_3244
Alternate gene names: NA
Gene position: 4107945-4108913 (Clockwise)
Preceding gene: 116622348
Following gene: 116622353
Centisome position: 41.22
GC content: 61.61
Gene sequence:
>969_bases ATGCCTTCACCACAGTCGCGCCAAGGTGATAAATTAAGCGCGATGCGACTTGCCGGACTACTTCTGCTTGCCGTCGCGGC CTCCGCCGCCGACCAGGATTTCAATGGGCGTTGGGATATCACTACTACGGGACAAGCGCGGCCTCGCGCCATGTGGCTGG AACTGAGCGGCATGGGCACGCCGAATCCGGCCGGTAAGTTCGTCAGCGCCTACAATGGCGACATGAATAAAGTGGACGCC ATCGCGGTCGAAAACGGAGAACTCCACTTCGGCTTCAACCTTCCTTCTCGGGGCGGAAAATCGTCGCCTTCGCCGCTCTA CCGTGCGCGCCTCGTCAACGGCGGACTCGAGGGCTCAATCGATGGCGCGCCTCCCGTGAAATTCACCGGCGTGCGCGCGC CCGTGATCGCCGATAAGGACGATGGCTCATGGAAGGAAGGCAAGCCCATCGAGCTCTTCAACGGCAAAGACCTAAGCGGA TGGAAGCCCCTCAATCCCGGCGCCGAGATGAAGTGGACCGTGGTGGATGGCGTCCTGCGCAACGCTCCGCCCACCACGGA CCTCATCAGCGAGCAGAAGTTCTGGAACTTCATGCTGCACGTGGATTTTCGAATCGTGGAGCACTCCAACAGCGGCATCG GACTGCGCGGCCGCTATGAAATCCAGATCCTGGAAGACTTCGGCAAACCGCCGAACTCGCATGGAGCCGCCGCGCTCTAC AGCCGCGTGCCGCCCTCCGTCAACGCCAGCAAGCCCGCCGGCGAATGGCAGAGCTACGACATCCGCCTGGTTGGCCGCAC CCTGACCGTGGTCCACAACGGTACGAAAGTGCTCGATCGCGTGGAAGTCGAGGGCCTGACCGCCATCGCCAACAACGCCG ACGAGGCGGAGCCCGGCCCGTTTATCGTGCAGGGCGATCACAGCTACGTCGAAATCAGGAAGTTCACGGTAACGCCGTTG ACTAAGTAA
Upstream 100 bases:
>100_bases GTAGTCTTGGCCGCGCCGAAGCCTGCCGTGCACGAGGCGGTGAGAATTGCGAGTATCCCGAGCGTTTGCGATCGCATGTT GTCTCCGAGCCAACCATTCT
Downstream 100 bases:
>100_bases GCTGTTACAGAAGTTTACTCACGTATTACGGGGAGGACCCTCCCTAACGGTCGGGGCTCCGACCGGAAGCGCGCGCGTCA GGAAGCGATCTCGCGATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MPSPQSRQGDKLSAMRLAGLLLLAVAASAADQDFNGRWDITTTGQARPRAMWLELSGMGTPNPAGKFVSAYNGDMNKVDA IAVENGELHFGFNLPSRGGKSSPSPLYRARLVNGGLEGSIDGAPPVKFTGVRAPVIADKDDGSWKEGKPIELFNGKDLSG WKPLNPGAEMKWTVVDGVLRNAPPTTDLISEQKFWNFMLHVDFRIVEHSNSGIGLRGRYEIQILEDFGKPPNSHGAAALY SRVPPSVNASKPAGEWQSYDIRLVGRTLTVVHNGTKVLDRVEVEGLTAIANNADEAEPGPFIVQGDHSYVEIRKFTVTPL TK
Sequences:
>Translated_322_residues MPSPQSRQGDKLSAMRLAGLLLLAVAASAADQDFNGRWDITTTGQARPRAMWLELSGMGTPNPAGKFVSAYNGDMNKVDA IAVENGELHFGFNLPSRGGKSSPSPLYRARLVNGGLEGSIDGAPPVKFTGVRAPVIADKDDGSWKEGKPIELFNGKDLSG WKPLNPGAEMKWTVVDGVLRNAPPTTDLISEQKFWNFMLHVDFRIVEHSNSGIGLRGRYEIQILEDFGKPPNSHGAAALY SRVPPSVNASKPAGEWQSYDIRLVGRTLTVVHNGTKVLDRVEVEGLTAIANNADEAEPGPFIVQGDHSYVEIRKFTVTPL TK >Mature_321_residues PSPQSRQGDKLSAMRLAGLLLLAVAASAADQDFNGRWDITTTGQARPRAMWLELSGMGTPNPAGKFVSAYNGDMNKVDAI AVENGELHFGFNLPSRGGKSSPSPLYRARLVNGGLEGSIDGAPPVKFTGVRAPVIADKDDGSWKEGKPIELFNGKDLSGW KPLNPGAEMKWTVVDGVLRNAPPTTDLISEQKFWNFMLHVDFRIVEHSNSGIGLRGRYEIQILEDFGKPPNSHGAAALYS RVPPSVNASKPAGEWQSYDIRLVGRTLTVVHNGTKVLDRVEVEGLTAIANNADEAEPGPFIVQGDHSYVEIRKFTVTPLT K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34857; Mature: 34726
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPQSRQGDKLSAMRLAGLLLLAVAASAADQDFNGRWDITTTGQARPRAMWLELSGMGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCC PNPAGKFVSAYNGDMNKVDAIAVENGELHFGFNLPSRGGKSSPSPLYRARLVNGGLEGSI CCCCCCCCEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHEEEEECCCCCCCC DGAPPVKFTGVRAPVIADKDDGSWKEGKPIELFNGKDLSGWKPLNPGAEMKWTVVDGVLR CCCCCEEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHH NAPPTTDLISEQKFWNFMLHVDFRIVEHSNSGIGLRGRYEIQILEDFGKPPNSHGAAALY CCCCCHHHHHHHHHEEEEEEEEEEEEEECCCCCCCCEEEEEEEEHHCCCCCCCCCHHHHH SRVPPSVNASKPAGEWQSYDIRLVGRTLTVVHNGTKVLDRVEVEGLTAIANNADEAEPGP HCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHCCEEEEECCCCCCCCCC FIVQGDHSYVEIRKFTVTPLTK EEEECCCCEEEEEEEEECCCCC >Mature Secondary Structure PSPQSRQGDKLSAMRLAGLLLLAVAASAADQDFNGRWDITTTGQARPRAMWLELSGMGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCC PNPAGKFVSAYNGDMNKVDAIAVENGELHFGFNLPSRGGKSSPSPLYRARLVNGGLEGSI CCCCCCCCEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHEEEEECCCCCCCC DGAPPVKFTGVRAPVIADKDDGSWKEGKPIELFNGKDLSGWKPLNPGAEMKWTVVDGVLR CCCCCEEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHH NAPPTTDLISEQKFWNFMLHVDFRIVEHSNSGIGLRGRYEIQILEDFGKPPNSHGAAALY CCCCCHHHHHHHHHEEEEEEEEEEEEEECCCCCCCCEEEEEEEEHHCCCCCCCCCHHHHH SRVPPSVNASKPAGEWQSYDIRLVGRTLTVVHNGTKVLDRVEVEGLTAIANNADEAEPGP HCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHCCEEEEECCCCCCCCCC FIVQGDHSYVEIRKFTVTPLTK EEEECCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA