Click here to switch to the map view.

The map label for this gene is yfiH [H]

Identifier: 116621890

GI number: 116621890

Start: 3514407

End: 3515366

Strand: Direct

Name: yfiH [H]

Synonym: Acid_2773

Alternate gene names: 116621890

Gene position: 3514407-3515366 (Clockwise)

Preceding gene: 116621885

Following gene: 116621892

Centisome position: 35.27

GC content: 58.44

Gene sequence:

>960_bases
GTGAGAGTTGGCGTATTCACCCCGTTGCTGTCGCAACTGTCCATCGACGATGTCTTCAAAAAGCTGCAAGGCTACAACAT
CAGTACCGTGGAACTCGGTACCGGAAATTATCCTGGCGGTGCGCACTGCGACCTCTCCATGCTGGAGAATAAGACCGCGC
TAAAAGACTTTAAAACCAAACTGTCCGACGCCGGTTTCTCAATCAGCGCCCTGAGTTGCCACGGCAACCCCCTGCATCCC
GATAAGGAAAAAGCCAAACACGATCAGGAGGTCAGCAAGAAAACCATTCGCCTCGCCGAAAAGCTCGAGGTCCCCGTCGT
GATCGATTTCAGCGGCTGCCCCGGCGATTCCCCCAATGCGAAATACCCCAACTGGGTCACCTGTCCCTGGCCCCCCGAGT
ATCTCGAGGTCCTCGCCTGGCAGTGGGACAAAGTCGTAACTCCGTATTGGACCAAGCAGGCTAGGTTCGCCGAAGACCAC
GGCGTGAAGATCGCCATCGAAATGCACCCCGGCTTCGTCGCCTACAGCCCCGAGACCATGCTCCGTCTGCGCGCCATCGC
CGGCAAGGCCATCGGCTGCAACTACGACCCCAGCCACATGTTCTGGCAGGGCATCGATCCCATCGCCGCCATCCGCATCC
TCGGCGATTGCATCTATCACGTCCACGCCAAGGATACTCAGATGTACCCCGCCAACCTCCCCAAAACCGGCGTTCTCGAC
ACCAAGAGCTACACCGACGAGCGCAATCGCGGCTGGATCTTCCGCACCTGCGGCTACGGCCACGGCGAGGAATGGTGGAA
GGAATTTGCCAGCACCCTTCGCATGTTCGGCTATGACTACGTCCTCTCCATCGAACACGAGGACAGTCTGCTATCCCCTG
AAGAGGGACTCTCCAAAGCCGCCACCTTCCTCAATTCCGTGGTGATGAAGGAAAAACCGGGCGCCGCCTGGTGGGTCTAA

Upstream 100 bases:

>100_bases
AAATTGCCCATGTCTGGGCAGTTTTACACGGCAATCGGTTTCCTGTAGACCGCGTGATATTCTGTTGTTGGTTTCAAAAC
AATACTTTAAGGAGATCTCC

Downstream 100 bases:

>100_bases
CTCCAATAGTCTAGAAGCTATGGCCCGCCGCCCTGGCGGGCCATGCCTTTCTGCGCGCCTGGTAGACCCCTTTCTTCTTC
TTTTGCGCGTCCTCGATGAT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRVGVFTPLLSQLSIDDVFKKLQGYNISTVELGTGNYPGGAHCDLSMLENKTALKDFKTKLSDAGFSISALSCHGNPLHP
DKEKAKHDQEVSKKTIRLAEKLEVPVVIDFSGCPGDSPNAKYPNWVTCPWPPEYLEVLAWQWDKVVTPYWTKQARFAEDH
GVKIAIEMHPGFVAYSPETMLRLRAIAGKAIGCNYDPSHMFWQGIDPIAAIRILGDCIYHVHAKDTQMYPANLPKTGVLD
TKSYTDERNRGWIFRTCGYGHGEEWWKEFASTLRMFGYDYVLSIEHEDSLLSPEEGLSKAATFLNSVVMKEKPGAAWWV

Sequences:

>Translated_319_residues
MRVGVFTPLLSQLSIDDVFKKLQGYNISTVELGTGNYPGGAHCDLSMLENKTALKDFKTKLSDAGFSISALSCHGNPLHP
DKEKAKHDQEVSKKTIRLAEKLEVPVVIDFSGCPGDSPNAKYPNWVTCPWPPEYLEVLAWQWDKVVTPYWTKQARFAEDH
GVKIAIEMHPGFVAYSPETMLRLRAIAGKAIGCNYDPSHMFWQGIDPIAAIRILGDCIYHVHAKDTQMYPANLPKTGVLD
TKSYTDERNRGWIFRTCGYGHGEEWWKEFASTLRMFGYDYVLSIEHEDSLLSPEEGLSKAATFLNSVVMKEKPGAAWWV
>Mature_319_residues
MRVGVFTPLLSQLSIDDVFKKLQGYNISTVELGTGNYPGGAHCDLSMLENKTALKDFKTKLSDAGFSISALSCHGNPLHP
DKEKAKHDQEVSKKTIRLAEKLEVPVVIDFSGCPGDSPNAKYPNWVTCPWPPEYLEVLAWQWDKVVTPYWTKQARFAEDH
GVKIAIEMHPGFVAYSPETMLRLRAIAGKAIGCNYDPSHMFWQGIDPIAAIRILGDCIYHVHAKDTQMYPANLPKTGVLD
TKSYTDERNRGWIFRTCGYGHGEEWWKEFASTLRMFGYDYVLSIEHEDSLLSPEEGLSKAATFLNSVVMKEKPGAAWWV

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 35892; Mature: 35892

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGVFTPLLSQLSIDDVFKKLQGYNISTVELGTGNYPGGAHCDLSMLENKTALKDFKTK
CCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHH
LSDAGFSISALSCHGNPLHPDKEKAKHDQEVSKKTIRLAEKLEVPVVIDFSGCPGDSPNA
HHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
KYPNWVTCPWPPEYLEVLAWQWDKVVTPYWTKQARFAEDHGVKIAIEMHPGFVAYSPETM
CCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHHH
LRLRAIAGKAIGCNYDPSHMFWQGIDPIAAIRILGDCIYHVHAKDTQMYPANLPKTGVLD
HHHHHHHCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHEEECCCCEECCCCCCCCCCCC
TKSYTDERNRGWIFRTCGYGHGEEWWKEFASTLRMFGYDYVLSIEHEDSLLSPEEGLSKA
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH
ATFLNSVVMKEKPGAAWWV
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRVGVFTPLLSQLSIDDVFKKLQGYNISTVELGTGNYPGGAHCDLSMLENKTALKDFKTK
CCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHH
LSDAGFSISALSCHGNPLHPDKEKAKHDQEVSKKTIRLAEKLEVPVVIDFSGCPGDSPNA
HHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
KYPNWVTCPWPPEYLEVLAWQWDKVVTPYWTKQARFAEDHGVKIAIEMHPGFVAYSPETM
CCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHHH
LRLRAIAGKAIGCNYDPSHMFWQGIDPIAAIRILGDCIYHVHAKDTQMYPANLPKTGVLD
HHHHHHHCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHEEECCCCEECCCCCCCCCCCC
TKSYTDERNRGWIFRTCGYGHGEEWWKEFASTLRMFGYDYVLSIEHEDSLLSPEEGLSKA
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH
ATFLNSVVMKEKPGAAWWV
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]