| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is aguA [H]
Identifier: 116621784
GI number: 116621784
Start: 3378176
End: 3380680
Strand: Reverse
Name: aguA [H]
Synonym: Acid_2666
Alternate gene names: 116621784
Gene position: 3380680-3378176 (Counterclockwise)
Preceding gene: 116621785
Following gene: 116621783
Centisome position: 33.92
GC content: 64.55
Gene sequence:
>2505_bases ATGTCGTTCAAATTCCTCGCACTTTTGCTCACGATCCCCGCCGTCCACGCGGAGACCGGCTATGATGCCTGGCTGCGATA CGCGCCGTTGAGCGACGCCGCCGCCCGCCCGTACCTCACTGCCCTGCCCGCGGCCGTCACGGTCTATGGCGCCTCGCCCG TGGTGCAAAGCGCCCAGCGGGAGTTGCTTCGCGGCGTGCGCGGCATGCTGGGCCGAACCCTTCGCATGGAGAGCAAGCTT CCCGCGGAACGCGCCATCCTGCTCGGCACGGCCGGCGACCTGCAAGCCGCCATTCCCCAACTGCATCTCCCGCCTGACCT TCCGGCCGACAGCTATCTGGTAACCACCGTCACCGCGAACGGCGCCCCGCATCTCGTCATTGCGGGCGCCAACGACCGTG CCGTGCTCTACGGCGTCTTCGCTTTGTTGCGCAAGATCGGCACCGGCCAAACGCTCAACGATGATGATCCGGTGCAAACC CCCTACGCGCCGGTGCGCTGGGTCAACGAGTGGAACAATCTCGATGGCACCATCGAGCGCGGCTACGGCGGACGCTCCAT CTTCTGGGACAACAACCGCGCGCGCGCCGACCTGACGCGCGTCGCCGATTACGGACGCATGCTGGCCTCGCTCGGCATCC AGGCCTGCTCCATCAACAACGTCAACGCCAACCCGCGCGTGCTGGCCAGCGATTTCCTGCCGGAGATCGTGCGCATTGCC GAAGCCTTCCGCCCGTGGGGCATTCGCGTCGCCCTGGCCGTGGATTTCGGCAGTCCGAAGACCATCGGCGGCCTCGATAC GTTCGATCCCGTGGATCCCAAAGTCGCCGCCTGGTGGAAAAGCAAAATCGACGAGTTGTACCGCGCCGTGCCCGATCTCG CCGGCATCGTCCTGAAGGCCGATTCCGAAGGCCGCGTAGGTCCCTCCACCTACGGACGCACGCACGCCGACGCCGCCAAC GTGGTGGCGCGCGGCTTGCAGCCCCACGGCGGCCTGCTCTTCTACCGCGGCTTCGTCTACGACCACCACATGGATTGGAA AAATCCCAAGAACGATCGCGGCCGCGCGGCATATGACAATTTCCAGCCGCTGGACGGCAAGTTCGATGCGAACGTGATCG TGCAGATCAAGCACGGGCCCATCGATTTTCAAGTTCGCGAACCGGCCTCGCCACTCTTTGCCGCCCTGGAAAAGACCAAT CAGGCGATTGAACTGCAAATCACGCAGGAGTACTTCGGGCAATCGCGCCACAACGTCTTCCTGGTGCCGATGTGGAAGAC CGCGCTCGATTTCGACATGCAGGCAGGGGGCACAACTCCGGTCAAAGCCCTGGCCGCCGGCAAGGTGTTTCACCGCCCCA TCGGCGGCTTCGTGGGCGTCTCCAACATCGGGCTCGACGACAACTGGTCCGGCAATCAGCTCTCGCAGGCGAACCTCTAC GGCTTCGGCCGCCTGGCCTGGAATCCGGACCTGACCTCGCAGCAGATCATCGACGAATGGACCCGCCTCACCTTCGGCAA CGAGCCGAAGACCGTGGAGACCATCACGGCGATGCAACTCGCCAGTTGGCCGGTATTCGAAAAATACACCGGCCCGCTCG GCCTGCAGACCCTCACCGACATCGTCGGCGATCATTACGGAGTCGCCGTGGAAGCCTCCGAGCACAATGGCTGGGGACAG TGGCACAACGCCGACGAAAAGGGCGTCGGCATGGATCGAACCGTCGCCACCGGCACCGGCTACATCGGCCAGTATCGTCC GCCGGTGGCGAAAATGTACGAGTCGCTCGAGACCTGCCCCGACGATCTGCTCCTCTTCCTCCATCACGTCCCCTACACCT ACAAGCTCCATTCCGGCAAGACCGTCATCCAGTACCTCTACGACTCGCATTACGAGGGCGCCGATGCCGTCGCCGCCTGG GTGCGCGATTTCCAGTCCCTGCGCGGCCACATCGACGATCAGCGCTACAACGAAGTCCTCGCCCAGCTGCGCTATCAGGC CGCCCATGTGGAAGTCTGGCGCGATGCCGTCAACAACTGGTTCCATCGCGAATCCGGGATTGCGGACGCGAAGGGTCGCG TGGGCAATCACCCCGGCCGTTCCGAGGCGGAGGCCATGAAGCTCGAAGGCTACACCGTCGCCGAGATCACGCCCTGGGAG TCAGCCTCGGGCGGCAAGGCGGTGACGTGCCCCGCGTCGAAGTGCACCGCATCGATGCAGTTCTCCGGCGCGCCCGGATG GTACACCCTGCGCGTCCAGTACTTCGACCTGAATGGCCCCGTATCCAGCTTCAAGCTCTGGGTCGGCAATCAACTGGTGG ACGAATGGTCAGCCACGGATCACCTTCCCGCGCGCAAACTGGACGCATCCTCCTCCACCCGCCGCGAAGTCTCCGGCATC GCCCTGCGCCCCGGCGACCAGGTCCGCATCGAAGCCATTCCGGAGGGCCGCGAGCTCGCCGCCCTCGACTACCTGGAAAT CCTGCCTAACGAACCGCGACAGTAA
Upstream 100 bases:
>100_bases GGGCCGCCCGGGCTGGACACCCATCGTTCCCAACGACCGGTGGGCAGACCCCAAAGACGATCGTCCCGTGCAGATTGAGT ATTGATATAGCGTACTGACC
Downstream 100 bases:
>100_bases AATAAGGGAGCGATCTCCCGGCACGCGTGAACCTCTTTCTCTTTCTTCTTCGCGTTACTCTGCGGCTCTGCGGCTCTGCG AGAAATGCCTTCCCCCAGAT
Product: alpha-glucuronidase
Products: NA
Alternate protein names: Alpha-glucosiduronase [H]
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MSFKFLALLLTIPAVHAETGYDAWLRYAPLSDAAARPYLTALPAAVTVYGASPVVQSAQRELLRGVRGMLGRTLRMESKL PAERAILLGTAGDLQAAIPQLHLPPDLPADSYLVTTVTANGAPHLVIAGANDRAVLYGVFALLRKIGTGQTLNDDDPVQT PYAPVRWVNEWNNLDGTIERGYGGRSIFWDNNRARADLTRVADYGRMLASLGIQACSINNVNANPRVLASDFLPEIVRIA EAFRPWGIRVALAVDFGSPKTIGGLDTFDPVDPKVAAWWKSKIDELYRAVPDLAGIVLKADSEGRVGPSTYGRTHADAAN VVARGLQPHGGLLFYRGFVYDHHMDWKNPKNDRGRAAYDNFQPLDGKFDANVIVQIKHGPIDFQVREPASPLFAALEKTN QAIELQITQEYFGQSRHNVFLVPMWKTALDFDMQAGGTTPVKALAAGKVFHRPIGGFVGVSNIGLDDNWSGNQLSQANLY GFGRLAWNPDLTSQQIIDEWTRLTFGNEPKTVETITAMQLASWPVFEKYTGPLGLQTLTDIVGDHYGVAVEASEHNGWGQ WHNADEKGVGMDRTVATGTGYIGQYRPPVAKMYESLETCPDDLLLFLHHVPYTYKLHSGKTVIQYLYDSHYEGADAVAAW VRDFQSLRGHIDDQRYNEVLAQLRYQAAHVEVWRDAVNNWFHRESGIADAKGRVGNHPGRSEAEAMKLEGYTVAEITPWE SASGGKAVTCPASKCTASMQFSGAPGWYTLRVQYFDLNGPVSSFKLWVGNQLVDEWSATDHLPARKLDASSSTRREVSGI ALRPGDQVRIEAIPEGRELAALDYLEILPNEPRQ
Sequences:
>Translated_834_residues MSFKFLALLLTIPAVHAETGYDAWLRYAPLSDAAARPYLTALPAAVTVYGASPVVQSAQRELLRGVRGMLGRTLRMESKL PAERAILLGTAGDLQAAIPQLHLPPDLPADSYLVTTVTANGAPHLVIAGANDRAVLYGVFALLRKIGTGQTLNDDDPVQT PYAPVRWVNEWNNLDGTIERGYGGRSIFWDNNRARADLTRVADYGRMLASLGIQACSINNVNANPRVLASDFLPEIVRIA EAFRPWGIRVALAVDFGSPKTIGGLDTFDPVDPKVAAWWKSKIDELYRAVPDLAGIVLKADSEGRVGPSTYGRTHADAAN VVARGLQPHGGLLFYRGFVYDHHMDWKNPKNDRGRAAYDNFQPLDGKFDANVIVQIKHGPIDFQVREPASPLFAALEKTN QAIELQITQEYFGQSRHNVFLVPMWKTALDFDMQAGGTTPVKALAAGKVFHRPIGGFVGVSNIGLDDNWSGNQLSQANLY GFGRLAWNPDLTSQQIIDEWTRLTFGNEPKTVETITAMQLASWPVFEKYTGPLGLQTLTDIVGDHYGVAVEASEHNGWGQ WHNADEKGVGMDRTVATGTGYIGQYRPPVAKMYESLETCPDDLLLFLHHVPYTYKLHSGKTVIQYLYDSHYEGADAVAAW VRDFQSLRGHIDDQRYNEVLAQLRYQAAHVEVWRDAVNNWFHRESGIADAKGRVGNHPGRSEAEAMKLEGYTVAEITPWE SASGGKAVTCPASKCTASMQFSGAPGWYTLRVQYFDLNGPVSSFKLWVGNQLVDEWSATDHLPARKLDASSSTRREVSGI ALRPGDQVRIEAIPEGRELAALDYLEILPNEPRQ >Mature_833_residues SFKFLALLLTIPAVHAETGYDAWLRYAPLSDAAARPYLTALPAAVTVYGASPVVQSAQRELLRGVRGMLGRTLRMESKLP AERAILLGTAGDLQAAIPQLHLPPDLPADSYLVTTVTANGAPHLVIAGANDRAVLYGVFALLRKIGTGQTLNDDDPVQTP YAPVRWVNEWNNLDGTIERGYGGRSIFWDNNRARADLTRVADYGRMLASLGIQACSINNVNANPRVLASDFLPEIVRIAE AFRPWGIRVALAVDFGSPKTIGGLDTFDPVDPKVAAWWKSKIDELYRAVPDLAGIVLKADSEGRVGPSTYGRTHADAANV VARGLQPHGGLLFYRGFVYDHHMDWKNPKNDRGRAAYDNFQPLDGKFDANVIVQIKHGPIDFQVREPASPLFAALEKTNQ AIELQITQEYFGQSRHNVFLVPMWKTALDFDMQAGGTTPVKALAAGKVFHRPIGGFVGVSNIGLDDNWSGNQLSQANLYG FGRLAWNPDLTSQQIIDEWTRLTFGNEPKTVETITAMQLASWPVFEKYTGPLGLQTLTDIVGDHYGVAVEASEHNGWGQW HNADEKGVGMDRTVATGTGYIGQYRPPVAKMYESLETCPDDLLLFLHHVPYTYKLHSGKTVIQYLYDSHYEGADAVAAWV RDFQSLRGHIDDQRYNEVLAQLRYQAAHVEVWRDAVNNWFHRESGIADAKGRVGNHPGRSEAEAMKLEGYTVAEITPWES ASGGKAVTCPASKCTASMQFSGAPGWYTLRVQYFDLNGPVSSFKLWVGNQLVDEWSATDHLPARKLDASSSTRREVSGIA LRPGDQVRIEAIPEGRELAALDYLEILPNEPRQ
Specific function: Releases 4-O-methylglucuronic acid from substituted xylo-oligosaccharides [H]
COG id: COG3661
COG function: function code G; Alpha-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 67 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011395 - InterPro: IPR005154 - InterPro: IPR011099 - InterPro: IPR011100 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF07477 Glyco_hydro_67C; PF07488 Glyco_hydro_67M; PF03648 Glyco_hydro_67N [H]
EC number: =3.2.1.139 [H]
Molecular weight: Translated: 91932; Mature: 91800
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKFLALLLTIPAVHAETGYDAWLRYAPLSDAAARPYLTALPAAVTVYGASPVVQSAQR CCHHHHHHHHHHHHHHCCCCHHHHEEECCCCCHHCCCHHHHCCCEEEEECCCHHHHHHHH ELLRGVRGMLGRTLRMESKLPAERAILLGTAGDLQAAIPQLHLPPDLPADSYLVTTVTAN HHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEEEEECC GAPHLVIAGANDRAVLYGVFALLRKIGTGQTLNDDDPVQTPYAPVRWVNEWNNLDGTIER CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEC GYGGRSIFWDNNRARADLTRVADYGRMLASLGIQACSINNVNANPRVLASDFLPEIVRIA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHHHHHHHHHH EAFRPWGIRVALAVDFGSPKTIGGLDTFDPVDPKVAAWWKSKIDELYRAVPDLAGIVLKA HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE DSEGRVGPSTYGRTHADAANVVARGLQPHGGLLFYRGFVYDHHMDWKNPKNDRGRAAYDN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC FQPLDGKFDANVIVQIKHGPIDFQVREPASPLFAALEKTNQAIELQITQEYFGQSRHNVF CCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEEHHHCCCCCCCEE LVPMWKTALDFDMQAGGTTPVKALAAGKVFHRPIGGFVGVSNIGLDDNWSGNQLSQANLY EEEECHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCE GFGRLAWNPDLTSQQIIDEWTRLTFGNEPKTVETITAMQLASWPVFEKYTGPLGLQTLTD EEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH IVGDHYGVAVEASEHNGWGQWHNADEKGVGMDRTVATGTGYIGQYRPPVAKMYESLETCP HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCH DDLLLFLHHVPYTYKLHSGKTVIQYLYDSHYEGADAVAAWVRDFQSLRGHIDDQRYNEVL HHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH AQLRYQAAHVEVWRDAVNNWFHRESGIADAKGRVGNHPGRSEAEAMKLEGYTVAEITPWE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEECCEEEEEECCCC SASGGKAVTCPASKCTASMQFSGAPGWYTLRVQYFDLNGPVSSFKLWVGNQLVDEWSATD CCCCCCEEECCHHHCCEEEEECCCCCEEEEEEEEEECCCCHHHEEEECCCHHHHHHCCCC HLPARKLDASSSTRREVSGIALRPGDQVRIEAIPEGRELAALDYLEILPNEPRQ CCCCHHCCCCCCHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SFKFLALLLTIPAVHAETGYDAWLRYAPLSDAAARPYLTALPAAVTVYGASPVVQSAQR CHHHHHHHHHHHHHHCCCCHHHHEEECCCCCHHCCCHHHHCCCEEEEECCCHHHHHHHH ELLRGVRGMLGRTLRMESKLPAERAILLGTAGDLQAAIPQLHLPPDLPADSYLVTTVTAN HHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEEEEECC GAPHLVIAGANDRAVLYGVFALLRKIGTGQTLNDDDPVQTPYAPVRWVNEWNNLDGTIER CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEC GYGGRSIFWDNNRARADLTRVADYGRMLASLGIQACSINNVNANPRVLASDFLPEIVRIA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHHHHHHHHHH EAFRPWGIRVALAVDFGSPKTIGGLDTFDPVDPKVAAWWKSKIDELYRAVPDLAGIVLKA HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE DSEGRVGPSTYGRTHADAANVVARGLQPHGGLLFYRGFVYDHHMDWKNPKNDRGRAAYDN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC FQPLDGKFDANVIVQIKHGPIDFQVREPASPLFAALEKTNQAIELQITQEYFGQSRHNVF CCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEEHHHCCCCCCCEE LVPMWKTALDFDMQAGGTTPVKALAAGKVFHRPIGGFVGVSNIGLDDNWSGNQLSQANLY EEEECHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCE GFGRLAWNPDLTSQQIIDEWTRLTFGNEPKTVETITAMQLASWPVFEKYTGPLGLQTLTD EEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH IVGDHYGVAVEASEHNGWGQWHNADEKGVGMDRTVATGTGYIGQYRPPVAKMYESLETCP HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCH DDLLLFLHHVPYTYKLHSGKTVIQYLYDSHYEGADAVAAWVRDFQSLRGHIDDQRYNEVL HHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH AQLRYQAAHVEVWRDAVNNWFHRESGIADAKGRVGNHPGRSEAEAMKLEGYTVAEITPWE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEECCEEEEEECCCC SASGGKAVTCPASKCTASMQFSGAPGWYTLRVQYFDLNGPVSSFKLWVGNQLVDEWSATD CCCCCCEEECCHHHCCEEEEECCCCCEEEEEEEEEECCCCHHHEEEECCCHHHHHHCCCC HLPARKLDASSSTRREVSGIALRPGDQVRIEAIPEGRELAALDYLEILPNEPRQ CCCCHHCCCCCCHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9044261; 10360571 [H]