| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621775
Identifier: 116621775
GI number: 116621775
Start: 3363917
End: 3364474
Strand: Direct
Name: 116621775
Synonym: Acid_2657
Alternate gene names: NA
Gene position: 3363917-3364474 (Clockwise)
Preceding gene: 116621774
Following gene: 116621779
Centisome position: 33.76
GC content: 56.99
Gene sequence:
>558_bases ATGAATAAACTCATGCGTACTCTCGCTCTAATAATGATCGGATGTCTTGCCGCCGCTGCCGCTGAAATTCCGCGTCCGGC GCCCGAATTGGCCGTGCAAGGGCCGGGCGGCAAGCCGCTGCGGCTTTCCCAGTTTCGAGGCAAAGTGGTGGTGCTGACGT TGATGCACACGACGTGCCAGCACTGCCAGGACCTGACACGTTTGCTGGTGCCGATTCAGAAGGACTATCAGGCGCGCAAT GTTGTGGTGTTCGAGGTCGCATTCAACGAGGACGCGCCGATGACGATGGGGCCGTTCTACAAGGTCTTCGAGCCGAATTT TCCGGTGGGGTTGACGAACGATGCCGCGGTCCGGCAGTTTCTGAAATGGAACGATAAGACGGATGGCCCGTTGATGGTCC CGCACATGACGTTCATCGACGCGAAGGGAAATATCGTTTACGATCACGGCGACAATGATTTCTTCGGCGCCTCTTTGGAT AAGAACATTCGCGGCCTGATCGATAAGATGGTCGCAAAGGCGCCGGCGGCAGCAACCTCGGCGGCGAAGAAGAAATAG
Upstream 100 bases:
>100_bases CGGACAGTTGGAGCATGCGGCCTCGATCCGGAAGACGGCCACGCAGGAGCTTGGCTGCGCGCCCGAACTGGTCAAATAAA TTGCTATTTTGGAATATCAC
Downstream 100 bases:
>100_bases TCAGTCGCCGGCTTTGACCCAGTCTTCGTTAAAGCGCACGTGCTTGATGGCTTTGCCTTCCGGAGTGAAATAGCTGTAGG TGACGTGGATGGCGCCATCG
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNKLMRTLALIMIGCLAAAAAEIPRPAPELAVQGPGGKPLRLSQFRGKVVVLTLMHTTCQHCQDLTRLLVPIQKDYQARN VVVFEVAFNEDAPMTMGPFYKVFEPNFPVGLTNDAAVRQFLKWNDKTDGPLMVPHMTFIDAKGNIVYDHGDNDFFGASLD KNIRGLIDKMVAKAPAAATSAAKKK
Sequences:
>Translated_185_residues MNKLMRTLALIMIGCLAAAAAEIPRPAPELAVQGPGGKPLRLSQFRGKVVVLTLMHTTCQHCQDLTRLLVPIQKDYQARN VVVFEVAFNEDAPMTMGPFYKVFEPNFPVGLTNDAAVRQFLKWNDKTDGPLMVPHMTFIDAKGNIVYDHGDNDFFGASLD KNIRGLIDKMVAKAPAAATSAAKKK >Mature_185_residues MNKLMRTLALIMIGCLAAAAAEIPRPAPELAVQGPGGKPLRLSQFRGKVVVLTLMHTTCQHCQDLTRLLVPIQKDYQARN VVVFEVAFNEDAPMTMGPFYKVFEPNFPVGLTNDAAVRQFLKWNDKTDGPLMVPHMTFIDAKGNIVYDHGDNDFFGASLD KNIRGLIDKMVAKAPAAATSAAKKK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20298; Mature: 20298
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLMRTLALIMIGCLAAAAAEIPRPAPELAVQGPGGKPLRLSQFRGKVVVLTLMHTTCQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHCCCEEEEHHHHHHHH HCQDLTRLLVPIQKDYQARNVVVFEVAFNEDAPMTMGPFYKVFEPNFPVGLTNDAAVRQF HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHH LKWNDKTDGPLMVPHMTFIDAKGNIVYDHGDNDFFGASLDKNIRGLIDKMVAKAPAAATS HHCCCCCCCCEECCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH AAKKK HCCCC >Mature Secondary Structure MNKLMRTLALIMIGCLAAAAAEIPRPAPELAVQGPGGKPLRLSQFRGKVVVLTLMHTTCQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHCCCEEEEHHHHHHHH HCQDLTRLLVPIQKDYQARNVVVFEVAFNEDAPMTMGPFYKVFEPNFPVGLTNDAAVRQF HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHH LKWNDKTDGPLMVPHMTFIDAKGNIVYDHGDNDFFGASLDKNIRGLIDKMVAKAPAAATS HHCCCCCCCCEECCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH AAKKK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA