Click here to switch to the map view.

The map label for this gene is 116621774

Identifier: 116621774

GI number: 116621774

Start: 3361841

End: 3363895

Strand: Direct

Name: 116621774

Synonym: Acid_2656

Alternate gene names: NA

Gene position: 3361841-3363895 (Clockwise)

Preceding gene: 116621772

Following gene: 116621775

Centisome position: 33.73

GC content: 62.63

Gene sequence:

>2055_bases
ATGAAGCGGGCATTGCTGGTGGGGGCAGTGATCGGCTTCGCGTTCTTCGCATACTCGAACTCGTTCAATGCGCCGTTCCT
GCTGGATAACGATCCGATCATTCTCAAGGATGCGCGCATCAAGGCCGTAACGGGCGAACACATCCACCGCATTTTTCACG
AGGAGTACTGGCCTACGGGACTCTCGGGCCTGTATCGTCCGGTCACAACGCTCTCATACCTGTTCAACTATTCGGTGCTG
GGCAATGAGGCCAATGCCTCGGGCTATCACTGTATCAATTTCCTGCTGCACGCGCTGAATATCGGCCTGGTCTACCTGCT
GGGGATGGCGATCTTCGAGGAGATGGCTCCGGCGCTGCTGTTGGCGGCGCTCTGGGGTGTGCACCCGGTGCTGACCGAAT
CGGTGACCAACATTGTGGGGCGCGCGGATCTCATCGGAGCGCTTGGCGTGCTGGCGGCGCTCATGGCGCATCGCAAGGCG
CTGGAGTCCAACGGCGCCCGCAAGGCGGCGTGGCTGGGCGTGATCGCGGCGGCTGTGACGCTCGGGATGTTCGCCAAGGA
AAGCACGGTGGTGGTGGTGGCGGTGATCGCGATCTGGGACCTGACGTTCGGGCGGGGAGCGTCGTGGAGGGCGCGGATGC
CGAGCTATGCGGCGGTGATGGTTCCGATCGCGGCCTATTTGTATGTGCGCGCGGCGGTGCTCAGCGGGATGCCGAGCGTG
ACCTTTCCGTTCGGTGACAATCCGCTGATCGGCGCGAGTTTCTGGGCGGCGCGGTTGACGGCGGTGAAGGTGATCGGCCG
GTACCTGATGCTGCTGGTGTGGCCGGCGCAGCTATCTTGGGATTATTCCTTCAACGAGATTCCGCTCTTCGGCACGGCAT
CGAGCTGGGAGGACGCCAAGGCGATTCTCTCGCTTCTGCTGTGCCTGGGGGCGGCGGGCGCGGCGATTGTCTGCTGGCGG
CGGAGCAAGCCGGTGTTTTTCGCGATCGCGTTTTTCTTCGCTACGATCTCGCCGACCTCGAATCTGGTGATTCAGATCGG
CAGCATCATGGCAGAGCGCTTTCTGTATCTCCCCTCGATCGGATTCGCGCTCCTGGTGGTGTACGGTTTGCACTTGCTTG
CGACGCGGAAACCCGAGGCACGCAAGATGATGCCGGCGGCTCTGGGCGTAGTTCTGCTGGCGCTTGCCGCGCGGACCTAT
GCCCGGAATACCGACTGGGTGGACCAGGGACGCTTTTGGCGCAGCGCAGCGGAGGCGGCTCCCGGGAGTTACAAGACCAA
CCAGGCCGCGGCTAACAATGCCGTCTATCTCACGCAACAGGACTGGGACCGGGCGGTGGCCGAGACCGACCGTGCGCTGG
CGATTCTCGACAAACTGCCCGACCTTCAGAATGTCGCAATCGCGTACCAGCACGCGGGCGTATTCTATCGGAATATGGGC
CTGCGGGTGGAGGCCGCGCAAAAGGGCGCGCAGGGCGAGAAGATCGCCGAAGGCTGGTACCGGAAGTCTCTGAATGCCCT
GCTGCGCAGCGAGAAGATCGAACTCGCACAGGACGAAATGAACCGGGCGGAGAATGCGAAGCGCGGCAAGCCGGGGCTCA
CGTTTGTCTCGAGCGCGCTCTATCTTCACCTGGGAAGGACGTATCAGAAGTTGAAAGATCCCACGCACGCCATTCAGGCC
TTCGAGCGCGGACGGGCGCTGGAATCCGATCCCGATCTTCTGGAAGACCTGGCGGCGGAATATCGCGCGGCGGGCGAGCG
GCGTTTGGCAGCGCAGGCGCTGGTGGAAGCGCTGGCGGTAGATTCGAACCGTACGCAGCTCATGTCGAAGCTGGTGGAGT
TGTATTCGGAGCTTGATCCCAAGGGCTGTTCGGTCAGCCATGAGGGCGGTTCGTCTGGGCTGAATACGGAGTGCCCGATG
GTCCACGGCGATATTTGCATGGCCTCGCGCAACGTGGCGGCGAGTTACGATCGCAGCGGACAGTTGGAGCATGCGGCCTC
GATCCGGAAGACGGCCACGCAGGAGCTTGGCTGCGCGCCCGAACTGGTCAAATAA

Upstream 100 bases:

>100_bases
GCACGATACCGAAACGACCGGCAAATCCGGCAGGCGCGTGAAAGATCGCCGTCGCACGGAACCGGCCGCTCCCGCCGCCG
CGAGGTTTAGTTCGCCGGCG

Downstream 100 bases:

>100_bases
ATTGCTATTTTGGAATATCACATGAATAAACTCATGCGTACTCTCGCTCTAATAATGATCGGATGTCTTGCCGCCGCTGC
CGCTGAAATTCCGCGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MKRALLVGAVIGFAFFAYSNSFNAPFLLDNDPIILKDARIKAVTGEHIHRIFHEEYWPTGLSGLYRPVTTLSYLFNYSVL
GNEANASGYHCINFLLHALNIGLVYLLGMAIFEEMAPALLLAALWGVHPVLTESVTNIVGRADLIGALGVLAALMAHRKA
LESNGARKAAWLGVIAAAVTLGMFAKESTVVVVAVIAIWDLTFGRGASWRARMPSYAAVMVPIAAYLYVRAAVLSGMPSV
TFPFGDNPLIGASFWAARLTAVKVIGRYLMLLVWPAQLSWDYSFNEIPLFGTASSWEDAKAILSLLLCLGAAGAAIVCWR
RSKPVFFAIAFFFATISPTSNLVIQIGSIMAERFLYLPSIGFALLVVYGLHLLATRKPEARKMMPAALGVVLLALAARTY
ARNTDWVDQGRFWRSAAEAAPGSYKTNQAAANNAVYLTQQDWDRAVAETDRALAILDKLPDLQNVAIAYQHAGVFYRNMG
LRVEAAQKGAQGEKIAEGWYRKSLNALLRSEKIELAQDEMNRAENAKRGKPGLTFVSSALYLHLGRTYQKLKDPTHAIQA
FERGRALESDPDLLEDLAAEYRAAGERRLAAQALVEALAVDSNRTQLMSKLVELYSELDPKGCSVSHEGGSSGLNTECPM
VHGDICMASRNVAASYDRSGQLEHAASIRKTATQELGCAPELVK

Sequences:

>Translated_684_residues
MKRALLVGAVIGFAFFAYSNSFNAPFLLDNDPIILKDARIKAVTGEHIHRIFHEEYWPTGLSGLYRPVTTLSYLFNYSVL
GNEANASGYHCINFLLHALNIGLVYLLGMAIFEEMAPALLLAALWGVHPVLTESVTNIVGRADLIGALGVLAALMAHRKA
LESNGARKAAWLGVIAAAVTLGMFAKESTVVVVAVIAIWDLTFGRGASWRARMPSYAAVMVPIAAYLYVRAAVLSGMPSV
TFPFGDNPLIGASFWAARLTAVKVIGRYLMLLVWPAQLSWDYSFNEIPLFGTASSWEDAKAILSLLLCLGAAGAAIVCWR
RSKPVFFAIAFFFATISPTSNLVIQIGSIMAERFLYLPSIGFALLVVYGLHLLATRKPEARKMMPAALGVVLLALAARTY
ARNTDWVDQGRFWRSAAEAAPGSYKTNQAAANNAVYLTQQDWDRAVAETDRALAILDKLPDLQNVAIAYQHAGVFYRNMG
LRVEAAQKGAQGEKIAEGWYRKSLNALLRSEKIELAQDEMNRAENAKRGKPGLTFVSSALYLHLGRTYQKLKDPTHAIQA
FERGRALESDPDLLEDLAAEYRAAGERRLAAQALVEALAVDSNRTQLMSKLVELYSELDPKGCSVSHEGGSSGLNTECPM
VHGDICMASRNVAASYDRSGQLEHAASIRKTATQELGCAPELVK
>Mature_684_residues
MKRALLVGAVIGFAFFAYSNSFNAPFLLDNDPIILKDARIKAVTGEHIHRIFHEEYWPTGLSGLYRPVTTLSYLFNYSVL
GNEANASGYHCINFLLHALNIGLVYLLGMAIFEEMAPALLLAALWGVHPVLTESVTNIVGRADLIGALGVLAALMAHRKA
LESNGARKAAWLGVIAAAVTLGMFAKESTVVVVAVIAIWDLTFGRGASWRARMPSYAAVMVPIAAYLYVRAAVLSGMPSV
TFPFGDNPLIGASFWAARLTAVKVIGRYLMLLVWPAQLSWDYSFNEIPLFGTASSWEDAKAILSLLLCLGAAGAAIVCWR
RSKPVFFAIAFFFATISPTSNLVIQIGSIMAERFLYLPSIGFALLVVYGLHLLATRKPEARKMMPAALGVVLLALAARTY
ARNTDWVDQGRFWRSAAEAAPGSYKTNQAAANNAVYLTQQDWDRAVAETDRALAILDKLPDLQNVAIAYQHAGVFYRNMG
LRVEAAQKGAQGEKIAEGWYRKSLNALLRSEKIELAQDEMNRAENAKRGKPGLTFVSSALYLHLGRTYQKLKDPTHAIQA
FERGRALESDPDLLEDLAAEYRAAGERRLAAQALVEALAVDSNRTQLMSKLVELYSELDPKGCSVSHEGGSSGLNTECPM
VHGDICMASRNVAASYDRSGQLEHAASIRKTATQELGCAPELVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224809432, Length=636, Percent_Identity=23.1132075471698, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI118766328, Length=742, Percent_Identity=24.5283018867925, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI118766330, Length=640, Percent_Identity=25.15625, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI301336134, Length=426, Percent_Identity=24.8826291079812, Blast_Score=111, Evalue=3e-24,
Organism=Homo sapiens, GI83415184, Length=387, Percent_Identity=24.8062015503876, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI22749211, Length=319, Percent_Identity=26.6457680250784, Blast_Score=89, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560436, Length=470, Percent_Identity=26.8085106382979, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25147174, Length=421, Percent_Identity=27.0783847980998, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24656717, Length=475, Percent_Identity=26.1052631578947, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI18110006, Length=475, Percent_Identity=26.1052631578947, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI161076610, Length=289, Percent_Identity=29.4117647058824, Blast_Score=111, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19920486, Length=289, Percent_Identity=29.4117647058824, Blast_Score=111, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24647123, Length=484, Percent_Identity=24.5867768595041, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281364285, Length=316, Percent_Identity=27.8481012658228, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24581187, Length=316, Percent_Identity=27.8481012658228, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74512; Mature: 74512

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50005 TPR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALLVGAVIGFAFFAYSNSFNAPFLLDNDPIILKDARIKAVTGEHIHRIFHEEYWPTG
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEHHHHHHHHHHHHHCCCCC
LSGLYRPVTTLSYLFNYSVLGNEANASGYHCINFLLHALNIGLVYLLGMAIFEEMAPALL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALWGVHPVLTESVTNIVGRADLIGALGVLAALMAHRKALESNGARKAAWLGVIAAAVT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGMFAKESTVVVVAVIAIWDLTFGRGASWRARMPSYAAVMVPIAAYLYVRAAVLSGMPSV
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
TFPFGDNPLIGASFWAARLTAVKVIGRYLMLLVWPAQLSWDYSFNEIPLFGTASSWEDAK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCEEEECCCCCHHHH
AILSLLLCLGAAGAAIVCWRRSKPVFFAIAFFFATISPTSNLVIQIGSIMAERFLYLPSI
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHH
GFALLVVYGLHLLATRKPEARKMMPAALGVVLLALAARTYARNTDWVDQGRFWRSAAEAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
PGSYKTNQAAANNAVYLTQQDWDRAVAETDRALAILDKLPDLQNVAIAYQHAGVFYRNMG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCC
LRVEAAQKGAQGEKIAEGWYRKSLNALLRSEKIELAQDEMNRAENAKRGKPGLTFVSSAL
CEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YLHLGRTYQKLKDPTHAIQAFERGRALESDPDLLEDLAAEYRAAGERRLAAQALVEALAV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSNRTQLMSKLVELYSELDPKGCSVSHEGGSSGLNTECPMVHGDICMASRNVAASYDRSG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCC
QLEHAASIRKTATQELGCAPELVK
CHHHHHHHHHHHHHHHCCCCHHCC
>Mature Secondary Structure
MKRALLVGAVIGFAFFAYSNSFNAPFLLDNDPIILKDARIKAVTGEHIHRIFHEEYWPTG
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEHHHHHHHHHHHHHCCCCC
LSGLYRPVTTLSYLFNYSVLGNEANASGYHCINFLLHALNIGLVYLLGMAIFEEMAPALL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALWGVHPVLTESVTNIVGRADLIGALGVLAALMAHRKALESNGARKAAWLGVIAAAVT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGMFAKESTVVVVAVIAIWDLTFGRGASWRARMPSYAAVMVPIAAYLYVRAAVLSGMPSV
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
TFPFGDNPLIGASFWAARLTAVKVIGRYLMLLVWPAQLSWDYSFNEIPLFGTASSWEDAK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCEEEECCCCCHHHH
AILSLLLCLGAAGAAIVCWRRSKPVFFAIAFFFATISPTSNLVIQIGSIMAERFLYLPSI
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHH
GFALLVVYGLHLLATRKPEARKMMPAALGVVLLALAARTYARNTDWVDQGRFWRSAAEAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
PGSYKTNQAAANNAVYLTQQDWDRAVAETDRALAILDKLPDLQNVAIAYQHAGVFYRNMG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCC
LRVEAAQKGAQGEKIAEGWYRKSLNALLRSEKIELAQDEMNRAENAKRGKPGLTFVSSAL
CEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YLHLGRTYQKLKDPTHAIQAFERGRALESDPDLLEDLAAEYRAAGERRLAAQALVEALAV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSNRTQLMSKLVELYSELDPKGCSVSHEGGSSGLNTECPMVHGDICMASRNVAASYDRSG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCC
QLEHAASIRKTATQELGCAPELVK
CHHHHHHHHHHHHHHHCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA