| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621725
Identifier: 116621725
GI number: 116621725
Start: 3289438
End: 3290745
Strand: Direct
Name: 116621725
Synonym: Acid_2607
Alternate gene names: NA
Gene position: 3289438-3290745 (Clockwise)
Preceding gene: 116621724
Following gene: 116621726
Centisome position: 33.01
GC content: 62.16
Gene sequence:
>1308_bases ATGAAAATCCGCGCTGTCATCTTTACCGCGCTCACCTTCGCCCTCGCGGGCCAGGTCAAACATATGCCATCGAAACTCAT CATCTTCGACCCCGGCCACTTTCACGCCACGCTGCTTCAAAAGGACATGTACCCCTGGCTCGATAAGCGCGTGACCGTCT ACGCTCCGCTCGGCACCGACCTCACCGACTACCTCAATCGAATTTCGCACTTCAACGCGCGCCCCGATAGCCCCACCAGC TGGGAACTCGACGTCCACACCAGTGCGGATCCCCTCGCCGCCCTCCTTCGCGAACGCCCCGGCAGCATCGTCGTCTTCAC CGGCCGCAACCGCGCCAAGATCGACCGCATCCTCGCCGCCCTCAAAGCCGGCCACCACGTGCTCGCCGACAAACCCTGGA TCATCACCGCGGCCGATCTGCCGAAGCTCGAGCAGGCGCTCACCCTCGCGAAGCAGAAGAACCTCGCTGCCTACGACATC ATGACCGAGCGCTACGAGGTCACAAGCGAACTCCAGCGCGAACTCGTCTCCGACCCCGCCATCTTCGGCGCGCCCGTGAG CGTGCGTGCCCGAAGCGTGCACCACATCATGAAAATCGTCGCAGGCGTCCCGCTCCGCCGTCCCGCCTGGTTCTTCGATA TCGCCGAGTACGGCGAAGGTCTCGCCGACGTCGGCACTCACGTCGTCGATCTCGTCCAATGGACCCTCTTCCCCGATCAG CCAGTCGATTATCACAAGGACATCGCCATCGGCCACAGAGACCGAGCCCCCTTGAAGATGTCCAAAGAACAGTTCACCCG CGTCACCGGCGAGCCGGATTTCACTCCGTCGCTCGCCGCCTACGTCCACTCCGGCGTGCTCGATTACTACTGCAACAACA CGGTCGCGTACACGCTCCGCGGCATTCCCGTCGAGCTCGAAATTCTCTGGAAGTGGGAGGCCCCCGAAGGCGGCGACGTG TACGAAGCGTCCTTCGTGGGCGCCAACTCGAAAGTGGAGATCCGGCAGGGCAGGGAAGAGAATTTCCTTCCTGAGTTGTA CATCGTGCCCACCGGTAACGGCGTCCCCGCTGCCGTCGAAAAGCGGGTCGCCGCCCTTCAATCCCGCTGGCCCGGACTCG CCGTCACTAGGCCTGGTGAGGACCTCAAGCTTGTCATCCCCGCCAAATTCCGCGTCGGCCACGAAGCCCACTTCGCCCAG GTCGCCAACCACTTCTTTAACTATGTGACCGACCCGAAGTCCATGCCTTCGTGGGAAACTCCATACATGCTGTCCAAATA TTTCGTCTCCGCGAACCGCGACCGTTAG
Upstream 100 bases:
>100_bases CCGCGAAATGCTACCTCGACGATCAGGAGGCCTACTCCGCCAACGAGGTCGCCATCAACTGGAATGCGCCCCTGGTCTTC CTTCTTGCCGGCGCGCTCAA
Downstream 100 bases:
>100_bases GGAGCGATCTCTTATGAAACTAAGCCTCCTCATCCTCACTTTCTCTCTGGCCCTCGGCGCCCAGGAATCCCGGCGCGAAA TCACCAACGCAGCGCCCAAC
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKIRAVIFTALTFALAGQVKHMPSKLIIFDPGHFHATLLQKDMYPWLDKRVTVYAPLGTDLTDYLNRISHFNARPDSPTS WELDVHTSADPLAALLRERPGSIVVFTGRNRAKIDRILAALKAGHHVLADKPWIITAADLPKLEQALTLAKQKNLAAYDI MTERYEVTSELQRELVSDPAIFGAPVSVRARSVHHIMKIVAGVPLRRPAWFFDIAEYGEGLADVGTHVVDLVQWTLFPDQ PVDYHKDIAIGHRDRAPLKMSKEQFTRVTGEPDFTPSLAAYVHSGVLDYYCNNTVAYTLRGIPVELEILWKWEAPEGGDV YEASFVGANSKVEIRQGREENFLPELYIVPTGNGVPAAVEKRVAALQSRWPGLAVTRPGEDLKLVIPAKFRVGHEAHFAQ VANHFFNYVTDPKSMPSWETPYMLSKYFVSANRDR
Sequences:
>Translated_435_residues MKIRAVIFTALTFALAGQVKHMPSKLIIFDPGHFHATLLQKDMYPWLDKRVTVYAPLGTDLTDYLNRISHFNARPDSPTS WELDVHTSADPLAALLRERPGSIVVFTGRNRAKIDRILAALKAGHHVLADKPWIITAADLPKLEQALTLAKQKNLAAYDI MTERYEVTSELQRELVSDPAIFGAPVSVRARSVHHIMKIVAGVPLRRPAWFFDIAEYGEGLADVGTHVVDLVQWTLFPDQ PVDYHKDIAIGHRDRAPLKMSKEQFTRVTGEPDFTPSLAAYVHSGVLDYYCNNTVAYTLRGIPVELEILWKWEAPEGGDV YEASFVGANSKVEIRQGREENFLPELYIVPTGNGVPAAVEKRVAALQSRWPGLAVTRPGEDLKLVIPAKFRVGHEAHFAQ VANHFFNYVTDPKSMPSWETPYMLSKYFVSANRDR >Mature_435_residues MKIRAVIFTALTFALAGQVKHMPSKLIIFDPGHFHATLLQKDMYPWLDKRVTVYAPLGTDLTDYLNRISHFNARPDSPTS WELDVHTSADPLAALLRERPGSIVVFTGRNRAKIDRILAALKAGHHVLADKPWIITAADLPKLEQALTLAKQKNLAAYDI MTERYEVTSELQRELVSDPAIFGAPVSVRARSVHHIMKIVAGVPLRRPAWFFDIAEYGEGLADVGTHVVDLVQWTLFPDQ PVDYHKDIAIGHRDRAPLKMSKEQFTRVTGEPDFTPSLAAYVHSGVLDYYCNNTVAYTLRGIPVELEILWKWEAPEGGDV YEASFVGANSKVEIRQGREENFLPELYIVPTGNGVPAAVEKRVAALQSRWPGLAVTRPGEDLKLVIPAKFRVGHEAHFAQ VANHFFNYVTDPKSMPSWETPYMLSKYFVSANRDR
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48859; Mature: 48859
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRAVIFTALTFALAGQVKHMPSKLIIFDPGHFHATLLQKDMYPWLDKRVTVYAPLGTD CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHCCCEEEEEECCCC LTDYLNRISHFNARPDSPTSWELDVHTSADPLAALLRERPGSIVVFTGRNRAKIDRILAA HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH LKAGHHVLADKPWIITAADLPKLEQALTLAKQKNLAAYDIMTERYEVTSELQRELVSDPA HHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC IFGAPVSVRARSVHHIMKIVAGVPLRRPAWFFDIAEYGEGLADVGTHVVDLVQWTLFPDQ EECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCCCC PVDYHKDIAIGHRDRAPLKMSKEQFTRVTGEPDFTPSLAAYVHSGVLDYYCNNTVAYTLR CCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE GIPVELEILWKWEAPEGGDVYEASFVGANSKVEIRQGREENFLPELYIVPTGNGVPAAVE CCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHH KRVAALQSRWPGLAVTRPGEDLKLVIPAKFRVGHEAHFAQVANHFFNYVTDPKSMPSWET HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PYMLSKYFVSANRDR CHHHHHHHHHCCCCC >Mature Secondary Structure MKIRAVIFTALTFALAGQVKHMPSKLIIFDPGHFHATLLQKDMYPWLDKRVTVYAPLGTD CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHCCCEEEEEECCCC LTDYLNRISHFNARPDSPTSWELDVHTSADPLAALLRERPGSIVVFTGRNRAKIDRILAA HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH LKAGHHVLADKPWIITAADLPKLEQALTLAKQKNLAAYDIMTERYEVTSELQRELVSDPA HHCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC IFGAPVSVRARSVHHIMKIVAGVPLRRPAWFFDIAEYGEGLADVGTHVVDLVQWTLFPDQ EECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCCCC PVDYHKDIAIGHRDRAPLKMSKEQFTRVTGEPDFTPSLAAYVHSGVLDYYCNNTVAYTLR CCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE GIPVELEILWKWEAPEGGDVYEASFVGANSKVEIRQGREENFLPELYIVPTGNGVPAAVE CCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHH KRVAALQSRWPGLAVTRPGEDLKLVIPAKFRVGHEAHFAQVANHFFNYVTDPKSMPSWET HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PYMLSKYFVSANRDR CHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA