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The map label for this gene is celD [H]

Identifier: 116621724

GI number: 116621724

Start: 3287735

End: 3289441

Strand: Direct

Name: celD [H]

Synonym: Acid_2606

Alternate gene names: 116621724

Gene position: 3287735-3289441 (Clockwise)

Preceding gene: 116621723

Following gene: 116621725

Centisome position: 32.99

GC content: 65.5

Gene sequence:

>1707_bases
ATGATCCTGAAAAATAGCGCCGCGCTCCTGCTGTTCTGCGCCGCCGCGGGCGTGGCCGCCGATGCCACGCCCGCCATCAA
AGTCGATCAGGTAGGTTACCTGACTGCCGCGCCCAAAGTTGCCTTCGTCGCCGCCCCCGCCGCCGCCCTGGAATTCACCG
TCCGGCGCGCCGCCGATGCGTCGGTCGTCTTCACCGGCCCTCTCTCCGCGCCCCACGAAGACCCCGATTCCGGCGACCGC
GTCCAGTCCGCCGATTTCTCCAAACTCACCACACCCGGCGCCTACTACCTCAACGTCCCCACCATCGGCCGTAGCTGGGA
ATTCGCCATCGGCCCCGATGTCTACTCACGCGCCTGGTATCTCGCCACCCGCTCCTACTACGGTCAGCGCTGCGGAATCG
CCGTCGATCTCGGCTCCGAATTTCCTGGCTTCCGGCACGACACCTGCCACCTCGAAGGCGCCTTTCACGCCTCCTCCGGC
AAGACCGGCGCCCACATCTCGCACGGCGGCTGGCACGATGCCGGCGATTACGGCCGCTACGTCGTCAACTCCGGCATCTC
TACCGGCACTCTCCTTTGGACCTGGGAACTCTACGGCCCCAAACTCCGCGCCGTCAAACTCAACCTCCCCGAATCCGGCA
ACGGGACCCCCGACCTGCTCAACGAAATCCGCTGGAACCTTGAGTGGATGCTCACCATGCAGGATGACGATGGCGGTGTC
TGGCACAAACAAACCAGCGATCGTTTCTGCGGCTTCGTCATGCCCGAAAAAGACAAGCTGGTGAGCTACGTAATCGGCAG
CGGCGCCGAGCCCTTCAAAACCTCCTGCGCCACCGGTGATCTCGCCGCCGTCATGGCCATAGCCGCCCGCGCCTACAAAC
CGTACGACGCGACCTTCGCGGCCAAATGTCTCCGCGCCGCCCAAAAAGCCTGGACCTGGCTCGACAAATTCCCCAACGCC
ACCTTCCGCAATCCCCAGGGTGTCTCCACCGGCGCCTATGGCGATGGCAACTGCGCCGACGAGCGGCTCTGGGCCGCCGC
CGAGCTCTTCCGCACCACCGCCTCCGCCGACTACGAACGCTACTTCCTCGATCACTACACCGCCCTCCAAAGCGGCATCC
GCGCCGCCGGACCGCAATCCTGGCCCAGCGTCGGGAATCTCGCTCTCTGGACCTATGTCCTCGGCGCGGGCAAGAATGCC
GATGCCGTCGCCGCCATTCGCGCCGCCTCCCTCGCGGCCGCCGGACAGATCGTCGAGCGCACCGCCGCCAATCCCTACCG
CGTCAGCCTCACCACCCGCGACTACATCTGGGGCTCCAACGCCGTTGCCGCCAACTACGGTATGCAACTCCTGATCGCCA
ACGCCTTCGCCCCGGATCCACGCTACGTCGAGACTGCGCTCGACAATCTCCACTACCTGCTCGGCCGCAATACCTTCTCG
CTCTCTTTCGTCACCCGCGTTGGCGATAATCCCTTCCGCCATCCTCACCACCGCCCCAGCGGCGCCGACGCCAATGCCGA
ACCCTGGCCGGGCCTGCTCTCCGGCGGCCCCAATCACGGCCGCCAGGACGATGCCATGCGCAAAATCCCCGCCGATACTC
CGCCCGCGAAATGCTACCTCGACGATCAGGAGGCCTACTCCGCCAACGAGGTCGCCATCAACTGGAATGCGCCCCTGGTC
TTCCTTCTTGCCGGCGCGCTCAAATGA

Upstream 100 bases:

>100_bases
TACTCGGCCCACGCCCCCGAAGAGCCCCTCATGCTGCAGGACCACCACAACCCCGTCCGCTTCCGCAATATCTGGATTCG
CCGTCTCACTCGCCACTACG

Downstream 100 bases:

>100_bases
AAATCCGCGCTGTCATCTTTACCGCGCTCACCTTCGCCCTCGCGGGCCAGGTCAAACATATGCCATCGAAACTCATCATC
TTCGACCCCGGCCACTTTCA

Product: cellulase

Products: NA

Alternate protein names: EGD; Cellulase D; Endo-1,4-beta-glucanase [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MILKNSAALLLFCAAAGVAADATPAIKVDQVGYLTAAPKVAFVAAPAAALEFTVRRAADASVVFTGPLSAPHEDPDSGDR
VQSADFSKLTTPGAYYLNVPTIGRSWEFAIGPDVYSRAWYLATRSYYGQRCGIAVDLGSEFPGFRHDTCHLEGAFHASSG
KTGAHISHGGWHDAGDYGRYVVNSGISTGTLLWTWELYGPKLRAVKLNLPESGNGTPDLLNEIRWNLEWMLTMQDDDGGV
WHKQTSDRFCGFVMPEKDKLVSYVIGSGAEPFKTSCATGDLAAVMAIAARAYKPYDATFAAKCLRAAQKAWTWLDKFPNA
TFRNPQGVSTGAYGDGNCADERLWAAAELFRTTASADYERYFLDHYTALQSGIRAAGPQSWPSVGNLALWTYVLGAGKNA
DAVAAIRAASLAAAGQIVERTAANPYRVSLTTRDYIWGSNAVAANYGMQLLIANAFAPDPRYVETALDNLHYLLGRNTFS
LSFVTRVGDNPFRHPHHRPSGADANAEPWPGLLSGGPNHGRQDDAMRKIPADTPPAKCYLDDQEAYSANEVAINWNAPLV
FLLAGALK

Sequences:

>Translated_568_residues
MILKNSAALLLFCAAAGVAADATPAIKVDQVGYLTAAPKVAFVAAPAAALEFTVRRAADASVVFTGPLSAPHEDPDSGDR
VQSADFSKLTTPGAYYLNVPTIGRSWEFAIGPDVYSRAWYLATRSYYGQRCGIAVDLGSEFPGFRHDTCHLEGAFHASSG
KTGAHISHGGWHDAGDYGRYVVNSGISTGTLLWTWELYGPKLRAVKLNLPESGNGTPDLLNEIRWNLEWMLTMQDDDGGV
WHKQTSDRFCGFVMPEKDKLVSYVIGSGAEPFKTSCATGDLAAVMAIAARAYKPYDATFAAKCLRAAQKAWTWLDKFPNA
TFRNPQGVSTGAYGDGNCADERLWAAAELFRTTASADYERYFLDHYTALQSGIRAAGPQSWPSVGNLALWTYVLGAGKNA
DAVAAIRAASLAAAGQIVERTAANPYRVSLTTRDYIWGSNAVAANYGMQLLIANAFAPDPRYVETALDNLHYLLGRNTFS
LSFVTRVGDNPFRHPHHRPSGADANAEPWPGLLSGGPNHGRQDDAMRKIPADTPPAKCYLDDQEAYSANEVAINWNAPLV
FLLAGALK
>Mature_568_residues
MILKNSAALLLFCAAAGVAADATPAIKVDQVGYLTAAPKVAFVAAPAAALEFTVRRAADASVVFTGPLSAPHEDPDSGDR
VQSADFSKLTTPGAYYLNVPTIGRSWEFAIGPDVYSRAWYLATRSYYGQRCGIAVDLGSEFPGFRHDTCHLEGAFHASSG
KTGAHISHGGWHDAGDYGRYVVNSGISTGTLLWTWELYGPKLRAVKLNLPESGNGTPDLLNEIRWNLEWMLTMQDDDGGV
WHKQTSDRFCGFVMPEKDKLVSYVIGSGAEPFKTSCATGDLAAVMAIAARAYKPYDATFAAKCLRAAQKAWTWLDKFPNA
TFRNPQGVSTGAYGDGNCADERLWAAAELFRTTASADYERYFLDHYTALQSGIRAAGPQSWPSVGNLALWTYVLGAGKNA
DAVAAIRAASLAAAGQIVERTAANPYRVSLTTRDYIWGSNAVAANYGMQLLIANAFAPDPRYVETALDNLHYLLGRNTFS
LSFVTRVGDNPFRHPHHRPSGADANAEPWPGLLSGGPNHGRQDDAMRKIPADTPPAKCYLDDQEAYSANEVAINWNAPLV
FLLAGALK

Specific function: This enzyme catalyzes the endohydrolysis of 1,4-beta- glucosidic linkages in cellulose, lichenin and cereal beta-D- glucans [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 9 (cellulase E) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR018242
- InterPro:   IPR001701
- InterPro:   IPR018221
- InterPro:   IPR004197
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF02927 CelD_N; PF00404 Dockerin_1; PF00759 Glyco_hydro_9 [H]

EC number: =3.2.1.4 [H]

Molecular weight: Translated: 61277; Mature: 61277

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00018 EF_HAND_1 ; PS00592 GLYCOSYL_HYDROL_F9_1 ; PS00698 GLYCOSYL_HYDROL_F9_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKNSAALLLFCAAAGVAADATPAIKVDQVGYLTAAPKVAFVAAPAAALEFTVRRAADA
CEECCCCCEEEEEHHCCCCCCCCCCEEECCCCEEECCCCEEEEECCHHHHHHHHHHCCCC
SVVFTGPLSAPHEDPDSGDRVQSADFSKLTTPGAYYLNVPTIGRSWEFAIGPDVYSRAWY
EEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEEECCCHHHHEEE
LATRSYYGQRCGIAVDLGSEFPGFRHDTCHLEGAFHASSGKTGAHISHGGWHDAGDYGRY
EEHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
VVNSGISTGTLLWTWELYGPKLRAVKLNLPESGNGTPDLLNEIRWNLEWMLTMQDDDGGV
EEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCE
WHKQTSDRFCGFVMPEKDKLVSYVIGSGAEPFKTSCATGDLAAVMAIAARAYKPYDATFA
EECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
AKCLRAAQKAWTWLDKFPNATFRNPQGVSTGAYGDGNCADERLWAAAELFRTTASADYER
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
YFLDHYTALQSGIRAAGPQSWPSVGNLALWTYVLGAGKNADAVAAIRAASLAAAGQIVER
HHHHHHHHHHHCHHHCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TAANPYRVSLTTRDYIWGSNAVAANYGMQLLIANAFAPDPRYVETALDNLHYLLGRNTFS
HCCCCEEEEEEEECEEECCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEE
LSFVTRVGDNPFRHPHHRPSGADANAEPWPGLLSGGPNHGRQDDAMRKIPADTPPAKCYL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCEEEE
DDQEAYSANEVAINWNAPLVFLLAGALK
CCHHCCCCCEEEEECCCCEEEEEHHHCC
>Mature Secondary Structure
MILKNSAALLLFCAAAGVAADATPAIKVDQVGYLTAAPKVAFVAAPAAALEFTVRRAADA
CEECCCCCEEEEEHHCCCCCCCCCCEEECCCCEEECCCCEEEEECCHHHHHHHHHHCCCC
SVVFTGPLSAPHEDPDSGDRVQSADFSKLTTPGAYYLNVPTIGRSWEFAIGPDVYSRAWY
EEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEEECCCHHHHEEE
LATRSYYGQRCGIAVDLGSEFPGFRHDTCHLEGAFHASSGKTGAHISHGGWHDAGDYGRY
EEHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
VVNSGISTGTLLWTWELYGPKLRAVKLNLPESGNGTPDLLNEIRWNLEWMLTMQDDDGGV
EEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCE
WHKQTSDRFCGFVMPEKDKLVSYVIGSGAEPFKTSCATGDLAAVMAIAARAYKPYDATFA
EECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
AKCLRAAQKAWTWLDKFPNATFRNPQGVSTGAYGDGNCADERLWAAAELFRTTASADYER
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
YFLDHYTALQSGIRAAGPQSWPSVGNLALWTYVLGAGKNADAVAAIRAASLAAAGQIVER
HHHHHHHHHHHCHHHCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TAANPYRVSLTTRDYIWGSNAVAANYGMQLLIANAFAPDPRYVETALDNLHYLLGRNTFS
HCCCCEEEEEEEECEEECCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEE
LSFVTRVGDNPFRHPHHRPSGADANAEPWPGLLSGGPNHGRQDDAMRKIPADTPPAKCYL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCEEEE
DDQEAYSANEVAINWNAPLVFLLAGALK
CCHHCCCCCEEEEECCCCEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3024110 [H]